Cyprinodon tularosa (White Sands pupfish): 119780964
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Entry
119780964 CDS
T07496
Symbol
sh3tc2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctul04131
]
119780964 (sh3tc2)
Membrane trafficking [BR:
ctul04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
119780964 (sh3tc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_8
SH3_2
TPR_1
SH3_1
TPR_2
TPR_MalT
TPR_7
TPR_10
SNAP
ARM_TT21_5th
TRIF-NTD
TPR_5
Motif
Other DBs
NCBI-GeneID:
119780964
NCBI-ProteinID:
XP_038137161
LinkDB
All DBs
Position
Unknown
AA seq
1543 aa
AA seq
DB search
MALISGSCRLLGEMASCCCRPFLNSPCCRPLIKVCLSSFTDISPAELDALWREPPYGLGG
TSENFSGTTIMTQGEEEDGRIGDAGEEEEHDNYWKKKEAFLRGSKISVGEKFSSEIVLLF
TGRRRSSEDPDQSLQEALRTRLRVVESNSKDITQLFKDLSARLVSVHAEKDSFVLTFKTV
EEVWKFSTYLSLGYVARCLENFLCDQSFWLNPELLSELEISVIVDEEHLATLYLGLLLQE
GSFFAKALFTRSEEDNEEQLSFKKNDLLMVRDTGQDSSWEGTMLSTGKHGQVPVDAMQPL
PYPFYQWFLRKYPGHAGCSPVEKELFENEIVTGSCEAIVDYSPAGPDELQLNQGDAVEIQ
GLLLRGLTVFIGRHASTGRTGFVHRAHVKPLNTTPLNRQLVFLTEEEKASLARVNAYSSQ
PSDSCLLERLFSSDISSVYRLDRLDEADFMYIRNRPKHDLKGLSSARQSLMSERSEGTTL
YQSSPRASVSYSLPRTSFHHSHNPLPGEGERISFNLEDTFKELDEFQEDPPLLVEENSWE
GDESELSDPTLTLFNQEHFQDDFLPLYDIDYSFLWVTFSGKNEDELSGHLESVRECAKRL
GMHWAHRRACFVLGRLCARKLKFSQARVYYEEALGVSVDSFSDVPLLVALFTNLTAIYLK
QRMNDKLPKTLEKAGALILCLPRHAFTSTDEVELLKLLLRRSVVLGDKLLEARVCYLISS
LFSLLKKTEDALPFLERLQFLNVTLSAAEGGPIAPLDLNWLLSWLYHRKYMPHLALASLS
LDSREDHSLQHAFQRIELFIRNSVRLNPSWKEGTSLLPAQIVVYLQQALAVAEKSNDIKM
QRDLCLGLALTYQQYGALDKAVRCAQQAVETGSHINEEDGFEASVLLGWLLVLTGQAERA
QNILQPLLTSLQSTDSPTQRGVIHNLLALCLRHQNRVREAGWHLHSALVISKESGNQRNQ
ALALANLGCLALDAGASLLAERFLVRSLCLFLDLWESPTDEEHVQAYLWLGRSYKDRGKS
QDIRACYEMGLLIALHARNLHSQMVVAKLLSLLYADMLLYGQSIVYYEHCVSVSRELKDK
RREGEYLEKLSSLYLSLNTEKSSRKSLDYTKQSLRISIDLGKREEESETWLQVGRIYYLI
QEDELADMYLQAAVKTALRMNDPRFAMNIYEEAGDVYFKGHRNRMASEHFYRDGSLPFAR
SIKDVHSEFRLLGKLIELLTKQGEQEEALQYATLAVEIANQTGVRENERTAYHRLATIYY
NLQQYEMAENYYLKSLSLCPPTLQNPAEAQYYTKVYCRLGNLTLHELKDAFDALGYFHLA
LAAALEDRAHPEALYVVYMKLAEIHGSHMPDAQLCQLYRDKAQSLQRVLAVVENSADTSP
KILNVDTSLLEGRSSADLEDREDTEDQSQCFADTDTIVSQSYSDSVITGSLDTAKENISD
SSSSTGTYQNPTEGKDSELDSEHSMPSQIPANPNSEFTDARDTDTDDQDEQNTPTEETAD
PIKADCVKGSVSMNNEKAANKNDAQRHGEGLSYAHNGNADVDT
NT seq
4632 nt
NT seq
+upstream
nt +downstream
nt
atggcattgatctctgggagctgccggctcttgggcgagatggcgtcttgttgctgcaga
cccttcctcaactcgccctgctgtcgaccactcatcaaagtctgcctctcctccttcaca
gacatctctcccgctgagctggatgctctttggagggagccgccgtacggtcttggagga
acaagtgagaacttctcagggactaccatcatgactcaaggtgaggaagaggatggccga
attggcgatgcaggagaggaagaggaacatgacaactactggaagaagaaagaggccttc
ctcaggggaagtaaaatttcagtcggggagaaattctcttcagaaattgtactgctgttt
acgggccggaggcgttccagcgaagatcccgaccagtccctgcaggaggcgctgcgcaca
cgcctccgagttgtagagagcaacagcaaagacattacgcagctcttcaaagacctttct
gctcgtctggtctctgtccatgctgagaaggacagctttgtcctcacatttaagacggtg
gaggaagtctggaagttttcaacctacctctcattaggttatgtcgctcgatgcttggag
aacttcctgtgtgaccagtctttctggctgaatcctgagctgctaagcgagctggagatc
agtgtcattgtagacgaggagcatctagcaaccctctatctgggacttctgctccaagaa
ggatcttttttcgcgaaggctttgttcaccaggagtgaagaggataatgaagagcagctg
tcatttaaaaagaacgacctgctgatggtgagggacacggggcaggacagcagctgggag
ggcaccatgctctccactggaaaacacggccaggtgcccgtcgacgccatgcagccgctg
ccctaccccttctaccagtggttcctaaggaagtatccaggccatgctggatgctcacca
gtagaaaaggaactgtttgaaaatgaaattgtgaccggttcgtgtgaagccatcgtggac
tacagtccagccgggccagatgagctgcagctgaaccaaggcgacgctgtggagatccag
ggcctgctgctccgcggactcaccgtcttcataggaagacacgcatccacaggacgcact
ggattcgtccacagagcccacgtcaagcctctgaacaccacacctctaaacagacaactg
gtgtttctcactgaggaggagaaggccagcctggctcgggtgaacgcatacagctcacag
ccaagtgacagctgcctgttggagagactcttctcgtcagacatcagttctgtgtacaga
ttagacagattagacgaggctgactttatgtacatccggaatcggcccaaacacgatctg
aagggtctttccagcgcccgtcagagcctgatgtctgaaagaagtgagggtacgacgctg
tatcagtcctcccctcgtgcctctgtctcttactccttacctcgcacctccttccatcat
tcccataatcctctgcctggagagggagaacgcatctccttcaacctggaggacacgttt
aaagagctggatgagtttcaggaggatcctcctctattggtggaagaaaacagctgggag
ggggacgagtcagagctcagcgacccaacactgactctgtttaaccaggaacacttccaa
gatgacttcctgcccttgtacgacatagactattccttcctgtgggtgactttcagtggg
aagaacgaagatgagctgtccggacaccttgagagcgtcagggagtgtgccaagagactg
ggcatgcactgggcgcatcggcgtgcgtgctttgtgttgggcagactttgtgccagaaag
cttaagttttcccaggcccgtgtatactatgaagaagctctgggtgtctctgtcgacagt
ttctctgatgtcccactgctcgtggctctcttcacaaacctcactgccatctacctgaag
cagcgtatgaatgacaaactgcccaaaaccctggagaaggctggtgccctgatactctgt
cttccccgacatgccttcacgtccacagatgaagttgaactcctgaagcttctgctgagg
agatccgtcgtattgggggacaaacttttggaggctcgcgtctgctacctcatttctagc
ctcttttcacttcttaagaagactgaggatgcactacctttcttagaaagacttcagttt
cttaatgtaacattatcggccgctgaagggggaccgattgcacctttggaccttaactgg
ctcttgagctggctctatcaccgtaaatacatgcctcacttggctctggcttccctaagc
ctggactcaagagaagaccattcacttcagcatgccttccagaggatcgagttgttcatc
aggaactctgtccgtctgaatccgagctggaaagaaggaacctcccttcttcctgcgcaa
atagtggtttacctccaacaggccttagctgtagctgagaagagtaatgatataaagatg
cagagggacctttgtttgggtttggcattgacctaccagcaatatggcgcactggataaa
gctgtacgctgcgctcaacaagctgtggagacaggaagtcatatcaatgaagaagatggc
tttgaggcatcagtgctacttggttggctgctggtgttgacaggtcaggctgaaagagct
caaaatattttacagccgctgctcacatcactacagagcacggatagtcccactcagcga
ggagtcatccataatctgttagctttatgcctgaggcatcagaatcgggtccgagaggca
ggctggcacctccactctgccctggtgatctccaaagagagcggaaaccaaaggaaccag
gctctggcactggctaacctgggctgcctcgctctggatgctggagcatccctcctcgca
gagcgattcctggttaggtccctgtgtctttttctggatctttgggagagtccaacagat
gaggaacacgttcaggcctatctttggctcgggcggagctacaaggacagaggaaagagt
caggacatcagggcatgctatgagatggggttgctaattgcactgcatgccagaaatttg
catagtcagatggttgtagccaagcttctgagtctgctctatgctgacatgctgctctac
ggtcagagcatcgtttactacgaacactgcgtctcagtttccagagagctaaaggacaaa
agacgggagggagagtatctggaaaaactcagcagtctctacctctcactcaacacggag
aaatcatctcgtaagtctcttgactacaccaagcagagcctgaggatctctattgacttg
ggaaagagagaggaagagtctgagacgtggttgcaggtgggacgcatctattacctcatc
caagaggacgagctggcggacatgtacctgcaggcagcggtgaagacagccctgaggatg
aacgaccctcgctttgcgatgaacatctatgaggaggcaggagatgtttactttaaaggc
cacaggaaccgaatggcttcagagcatttctacagggatgggagtctgccgtttgctcgg
agcatcaaagacgtccattcagagttccgtttgttggggaaattaatcgagctcctaacg
aagcaaggagagcaggaggaagctttgcagtatgccacactggctgttgaaatagctaac
cagacaggagttcgtgaaaatgagaggactgcatatcatcgcttggccactatttattac
aacctgcagcagtatgagatggcagaaaactactacctgaagtccctgtccctgtgtcca
cctactctgcagaatcctgcagaagcgcagtattacactaaagtctactgcaggctgggg
aacctgacgctacacgaactcaaggatgctttcgatgcattggggtacttccatttggct
ctggcagctgctcttgaggaccgagctcatcccgaagcgctttatgtggtgtacatgaag
ctggcggagatacacggcagccacatgcctgatgctcagttatgccaactttatagagac
aaagctcagagtctgcagagggttttggccgttgtggaaaactctgccgacacaagtcct
aaaatattaaatgtcgatacgagtttgcttgaaggacgctcttcggctgatcttgaagac
agggaagacacggaggatcagagtcagtgctttgcagacacagacaccatcgtgagtcag
tcctatagtgacagcgtcatcacagggtccttagatacagctaaggagaacatttcagac
tccagcagctccaccggcacgtaccagaatcccaccgaagggaaggattcagagttggac
tctgagcacagcatgcccagtcaaatccctgcaaatcctaacagtgagttcacggacgcc
agagatacagatacggacgatcaagacgagcaaaacaccccgaccgaagaaacagctgat
ccaattaaagcagactgtgtgaagggttctgtctccatgaacaatgagaaagctgcaaat
aagaatgatgcacagagacacggggagggactcagttatgcacacaacgggaacgcagac
gttgacacgtag
DBGET
integrated database retrieval system
