| Entry |
|
|---|
| Symbol |
herc4
|
|---|
| Name |
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
|
|---|
| KO |
|
|---|
| Organism |
ctul Cyprinodon tularosa (White Sands pupfish)
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:ctul00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119781069 (herc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:ctul04121]
119781069 (herc4)
Enzymes [BR:ctul01000]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119781069 (herc4)
Ubiquitin system [BR:ctul04121]
Ubiquitin ligases (E3)
HECT type E3
119781069 (herc4)
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
Unknown
|
|---|
| AA seq |
1063 aa
MSGQVRSQVYPEVRDTMLCWGNASYGQLGLGGIDEEIVVVPRKCEFFHGKRVNGVGCGRR
HTAFLLDDGTVYTCGCNDLGQLGHEKSRKKPEQVGALDAQIIVALSCGESHTLALNDKGQ
VFSWGLGSDGQLGLNNFEECIRVPRNIKSLSEVQIAQVACGFWHSLALARGGQIFSWGQN
RSGQLGLGLAGQSIPTPQMVQSLQGIPFAQLSAGGAHSFALTLSGAVFGWGCNKFGQLGV
NDTNDRCFPTLLKSLRSQRVIYVSCGEDHTAVLTKEGGVFTFGAGGYGQLGHNSTNHEIN
PRKVFELMGNVVTQIACGRQHTLAFTPACGKMDSFGLGGNGQLGTRSTCNRKSPAPVKGP
WAASSAAEENDADQSCFVKRIYAGGDQSFAHYCTVNDPQDMDNMRMENLSGKICTLNEDV
VQKWLNHSAARLPADVSNEIDLVFSSASCLNGSFLSTSHPGHFCTSSKYSGVDMNTARLL
LHRLIQQDHPKISQQVAASLEKDLIPRLTNSPPDIEALRLYLTLPECPLFSDRSNYITIT
IPFAKCVISLKEAPLKVLGNWWSTFEPMFFQRLVDLYKDVVVYLLQMHKVGIPLAEQRIF
SCFMDTALSFLEILHKVNEKAGSIIQYDKFYIHELDNLIDIRNDYVTWIQRQMYPMGRDG
VVTLCKYPFVFDAQAKTALLQTDAVIQMQMAVDQAQLQNFSSMFLPAVESVNPCLILIVR
RENIVGDTMEVLRKSKNVDYKKPLKVIFVGEDAVDAGGVRKEFFLLIMKELLDPKYGMFR
YYEESRLIWFSHKTFEDFDLFNLIGVICGLAIYNFTIVELNFPLALYKKLLKRKPTLEDL
KELMPDVGRSLQELLDYTEDDIEDTFCLNFTITEDNYGATEVLELVPNGENINVNKSNRQ
DFVDAYVDYVFNSSVGPLFEGFYAGFHKVCGGKVLDLFQPSELQAMVIGNTNYDWTELEK
STEYKGEYWAEHPTIKLFWEVFHELPLEKKKQFLLFLTGSDRIPILGMKSLKLVIQPTGG
GEHYLPVAHTCFNLLDLPKYTNIETLREKLLHAIDHNQGFNLA |
|---|
| NT seq |
3192 nt +upstreamnt +downstreamnt
atgagcggacaagtacggagccaagtgtatcccgaggtgagagacaccatgctgtgttgg
ggaaatgcttcctatggacagctgggactgggcgggatcgacgaagagatcgtggttgtc
ccgcgaaagtgtgagttctttcacggtaagcgggtgaacggcgtggggtgcggccgcaga
cacacggctttcctgctggacgatggcaccgtttacacttgtggctgtaacgacttgggg
caactgggacacgagaagtccagaaagaaaccagagcaggtaggggccttagatgctcag
atcatcgtggctttgtcctgcggagagtcccacacgctcgccttaaacgacaaagggcag
gttttctcctgggggctcggttcagacggacaactgggcttgaataactttgaagaatgt
atcagagtcccgaggaacataaagagtctgtcggaggtacagatcgcccaggtagcctgt
ggcttctggcactccctggctctagcaagaggtgggcagatcttctcctggggtcagaac
cgatccggtcagctggggcttggattagcgggacaaagcattcccacacctcagatggtt
cagtccctgcagggcattcctttcgctcagctgtcagcaggtggcgctcacagcttcgcg
ctcacgctctctggagccgtgtttggttggggctgcaacaagttcggccagctgggtgtc
aacgacaccaatgatcgctgtttcccaaccctcctcaagtcattaagatcacagagggtg
atctatgtctcctgtggagaagatcacacagccgtgctcaccaaggaaggaggtgtgttt
accttcggagcagggggatacggacagctggggcataactctaccaaccatgaaatcaac
cccaggaaggtgtttgagctcatggggaacgtcgtcacacagattgcatgtgggaggcag
cacacactggctttcactcctgcctgtgggaagatggattcattcgggttggggggtaac
gggcagctgggtactcgctccacctgcaacaggaaaagcccagccccggtcaaaggcccc
tgggctgcctccagtgctgcagaggaaaatgatgctgatcagagctgcttcgtcaaaagg
atttatgctggaggagatcagagctttgctcattattgcactgttaatgaccctcaggat
atggacaatatgagaatggagaacctttcaggaaagatttgcaccctgaatgaggacgtt
gtacagaaatggctgaatcactcggcggcaagactcccagcagacgtatccaatgagatc
gacctggtgttctcctctgcaagctgcctcaacggatcgtttttgtcaacgagtcatcca
ggtcacttctgtaccagcagtaaatactctggggtggatatgaacacggctcgcctcctt
ctccacagactgattcaacaagaccatccaaagatttcccagcaggttgctgccagtctg
gagaaggacctgattcccagattaaccaactctcctccagacatcgaagctctgaggctc
tacctaacgctaccagaatgcccgctcttcagcgaccgcagcaattacatcaccatcact
atcccctttgccaaatgtgtcatcagtttgaaagaggctccgctgaaggtgctgggaaac
tggtggtccaccttcgagcccatgttcttccagcgcctggtggatctgtacaaagatgtg
gtggtgtacctgctccagatgcacaaggtgggcattcctctggccgagcagaggatcttc
tcctgcttcatggacacggcactcagcttcctggagattctgcacaaggtgaacgagaaa
gcaggaagcatcatccagtacgataagttctacattcatgagctggataatctgatagac
atcagaaacgactacgtcacgtggatccagaggcaaatgtacccaatgggtcgagacggc
gtggtgactctctgcaaataccccttcgtattcgacgctcaggcgaaaacggcgctgctg
cagacagacgccgtcattcagatgcagatggcggtggatcaggcccagctgcaaaacttc
agctccatgttcctgccagccgtcgaatccgtcaacccctgtctcatcctgatcgtgcgc
agggaaaacatcgttggagacacaatggaggtcctcaggaaatccaagaacgtcgactac
aaaaaaccgctcaaggttatcttcgtgggagaagatgcagtcgatgctggaggcgtcaga
aaggagttcttcctcctgatcatgaaagagctgctggatcccaaatatgggatgtttcgc
tactacgaggaatccagactcatctggttttcacacaagaccttcgaggactttgacttg
tttaacctcattggggtcatctgcggtctggccatctacaatttcaccatcgtggagctc
aacttcccgctggcgctttacaagaagctcctgaagaggaaaccgacgctggaagacctg
aaggagctaatgccagacgtaggaaggagcctgcaggaactactcgactacacggaggat
gacatagaagacactttctgtttgaatttcaccatcacggaggataactacggcgccacc
gaggtcttagaattggtaccaaacggtgagaacatcaatgtcaataagtcgaaccggcag
gactttgtggacgcctacgtcgactacgtcttcaactcctccgtagggccgctgttcgaa
ggcttctacgcaggcttccacaaagtgtgtggcggaaaagttttagatctgttccagccc
agcgagctccaagctatggtcatcggaaacaccaactatgactggacagagctagaaaag
agcactgaatataaaggagaatactgggctgaacatccaaccataaagcttttctgggag
gtcttccatgagcttccattggaaaagaaaaagcagtttctcttgttcctcacaggaagc
gaccgcatccccatcctgggcatgaagagcctgaagctggtgatccagcccaccggtgga
ggcgagcattacctacctgtagctcacacctgcttcaacctcttagaccttcccaaatac
accaatatagaaacactcagagagaagcttctacacgccatagatcacaatcaaggcttt
aacctggcctga |
|---|
