Cyprinodon tularosa (White Sands pupfish): 119781078
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Entry
119781078 CDS
T07496
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03430
Mismatch repair
ctul03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119781078 (mlh1)
03460 Fanconi anemia pathway
119781078 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctul03400
]
119781078 (mlh1)
DNA repair and recombination proteins [BR:
ctul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
119781078 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
119781078
NCBI-ProteinID:
XP_038137361
LinkDB
All DBs
Position
Unknown
AA seq
771 aa
AA seq
DB search
MAGVIRRLDETVVNRIAAGEVIQRPANAVKEMIENCLDAKASSIQVTVKDGGLKLLQIQD
NGTGIRREDMEIVCERFTTSKLQTFEDLSAIATYGFRGEALASISHVAHVTITTKTADAK
CAYRASYSDGKLKGPPKPCAGNQGTQILVEDLFYNVSTRRKALKSPGDEYSRIVEVVSRY
AIHNSGKSFSVKKQGETVADVRTLPNASVVDNIRSVFGNAVSRELIEVGCEDPKLAFTLK
GYISNANYSVKKCILVLFINHRLVESSALKKAVERVYAAYLPKNTHPFLYLSLEIAPQNI
DVNVHPTKHEVHFLHEDSVIESVQKHVESKLLGSNSSRTYFTQTLLPGLSVSGGTEMKAS
SSAAESAERVYAHQMVRTDCRAQKLDAFLQPKERPAPDPEKPGPSRGAAQPDSLEMDDAD
DAEMLEAVQEAQVEESREEGSVTAEEAPRKRPREENRQPPEREDDEMTAAATPKRRVIKL
TSVRELRAEVTENTHKGLQEMLQKHSFVGCVNPQWALIQHHTKLYLLNATKLSQELFYQI
LIYDFGNFGVLRLSTPAPLYDLAMLALDSEESGWTEEDGPKEGLAQYIVDFLKKKAEMLE
DYFSMEIDQEGNLTGLPLLLDKYTPIMEGLPMFILRLATEVNWDNEKECFRDFSKECSAF
YSIRKQYVLEAEPGEEPVRRSDFTGTRKTCLQVFNVCLCSRRQRGAPGAGKWNTSSSKPS
ERSSVPRKPSARTAACCRSPTCPTSIKCSSDAETRNASRAAVLYVNHLFCK
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgtcatcaggaggctcgatgagaccgtggttaacaggatagcagcgggagaa
gttatccagcgtcctgccaacgcagtcaaagaaatgatcgaaaactgtttggatgcaaag
gcttccagcatccaggtgacggtgaaggacggaggcctgaagctcctccagatccaggac
aacggcacagggatcaggagagaggacatggagattgtttgtgagaggttcaccaccagc
aaactgcagacctttgaggacctgtcagctatcgccacctatgggttcagaggagaggct
ctggccagtatcagccacgtggctcatgttaccataacgaccaagacagctgatgcaaag
tgtgcttacagagccagctacagcgatggcaaactgaagggcccgcccaagccgtgcgcc
ggtaaccaggggacccagatccttgtggaggaccttttctataacgtgtccaccaggagg
aaagctctgaagagcccaggagacgagtactccaggatcgtggaggtggtcagcaggtac
gcgatacacaactctggtaaaagcttctcagttaaaaagcaaggagagacggtggccgac
gtgaggacgcttcctaacgcctccgtcgtggacaacatccgcagcgttttcggaaacgcg
gtcagcagggagctgatcgaagttggctgcgaagatccgaagctcgcgttcaccttaaaa
ggctacatctccaacgccaactactctgtgaagaaatgcatcctggtcctgttcatcaac
caccgtctggtggagtcgagcgctttgaagaaggcggtggagagggtttacgctgcgtac
cttcccaagaacacgcaccccttcctgtacctcagcttggaaatcgccccacagaacatc
gacgtgaacgtccaccctaccaaacacgaggtgcacttcctgcacgaggacagcgtgatc
gagagcgttcagaagcacgtggagagcaaactgctgggctccaattcctcccgcacgtat
ttcactcagacgttgcttcctgggctgtcggtttctggtggaaccgagatgaaggcatcc
agctccgcggcggagtccgccgagcgcgtctacgcccaccagatggtgagaaccgactgc
cgcgcgcagaaactggacgccttcctgcagccgaaagaaaggccggcacccgaccccgag
aagcccggtcccagcaggggggcggctcagccggacagtttggagatggacgacgcagac
gatgcagagatgctggaggctgtgcaggaagcacaggtggaagaaagcagagaggaaggc
agcgtcactgctgaggaggcgccaaggaagcgaccgagagaggagaaccgtcagcctcca
gagagggaggatgacgagatgacggcggcagctacgcccaagaggcgggtgatcaaactg
accagcgtcagagagctgagagccgaggtgacggagaacacgcacaaaggtttgcaggaa
atgttgcagaagcactccttcgtcggctgcgtcaatccacagtgggctttgatccagcat
cacactaagctctacctgctgaacgccaccaaactcagtcaggagcttttctaccagatt
ctcatctatgactttggaaactttggagtcctcagactgtctacgccggcgcctctctat
gacctggccatgctggcgctggactcggaggagagcggctggacggaggaggacgggccc
aaggagggcctggctcagtacatcgtggacttcctgaagaagaaagcagagatgctggag
gactacttctccatggagatagaccaggaaggaaacctaacaggactgcctctcctcctg
gataaatacacgcctataatggaaggcctccccatgttcatcctccgccttgccaccgag
gtcaactgggacaatgagaaggaatgcttcagggacttcagcaaggagtgcagcgccttc
tactccatcaggaagcagtacgtcctggaggccgagccaggggaggagccggtaaggagg
tccgactttaccggaacgagaaaaacctgccttcaggtgtttaatgtttgcctgtgttcc
aggaggcagaggggtgctcctggagctggaaagtggaacacgtcctcttcaaagccttcc
gaacgctcttcagtcccccgaaaaccttcagcgaggacggcagcgtgctgcagatcgcca
acctgcccgacctctataaagtgttcgagcgatgctgagacacgaaacgcctccagagct
gctgttttatacgtgaatcacttgttctgtaaataa
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