KEGG   Cyprinodon tularosa (White Sands pupfish): 119781101
Entry
119781101         CDS       T07496                                 
Symbol
ercc8
Name
(RefSeq) DNA excision repair protein ERCC-8
  KO
K10570  DNA excision repair protein ERCC-8
Organism
ctul  Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03420  Nucleotide excision repair
ctul04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ctul00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    119781101 (ercc8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    119781101 (ercc8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ctul04121]
    119781101 (ercc8)
   03400 DNA repair and recombination proteins [BR:ctul03400]
    119781101 (ercc8)
Ubiquitin system [BR:ctul04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     119781101 (ercc8)
DNA repair and recombination proteins [BR:ctul03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      119781101 (ercc8)
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EML WDR55 Beta-prop_TEP1_C WDR90_beta-prop_4th ANAPC4_WD40 NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_RIG_1st Beta-prop_WDR75_2nd Beta-prop_SCAP WD_LRWD1 Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N Cytochrom_D1 Beta-prop_HPS5
Other DBs
NCBI-GeneID: 119781101
NCBI-ProteinID: XP_038137396
LinkDB
Position
Unknown
AA seq 401 aa
MLGFLSARQTGLDDPLRLRRAESTRRVLSLKLNPDRDVDRIHGNGINAIDIETIEGRYML
SGGADGVIVIYDLENHSGKQQYTCRPVRTVGRSSRHVHRFSVETVQWYPYDTGMFVSSSF
DKTMKVWDTETLKPAEVFEFEGNVYSHHLSPIARKHSLIAVGTKNPKIQLCDLKSGSRIH
VLQGHRAEVLSVRWSPRYEYILATASADSKVKVWDVRRASGSLFTLDQHNGEKSKASSEA
VNTAHNGRVNGLCFTSDGLYLLTTGTDDRMRLWNSATGENTLVNFGKVCNESRKRLQFSV
SHGCSPEFVFVPCGSSVAVYTLHTGELITMLRGHYNNVDCCEFHPDYQELYSGGKDGNLL
AWVPVVRNPDVEEDSKDEKRGAAGLPAVNPAFQDTWSSDED
NT seq 1206 nt   +upstreamnt  +downstreamnt
atgttagggttcctatcagcgaggcagactggtctggacgatccactgcggcttagacgt
gcagaatcaacgagaagagtcctcagtctgaagttaaatcctgacagagatgtggaccga
atccacggaaatgggattaatgccattgacattgaaacaattgaagggagatatatgttg
tctggaggagcagacggagtcattgtcatctatgacctcgagaaccacagtggaaaacaa
caatacacctgcaggccagtcaggactgttggaaggtcaagcagacacgtccacagattc
agcgtggagacagtccagtggtatccttatgatacagggatgtttgtctccagttccttt
gataagaccatgaaagtgtgggacacagaaacattaaaaccagctgaagtgttcgagttt
gagggcaacgtctacagtcaccacttatcacccattgcaaggaaacacagtctcattgca
gtcggcaccaaaaaccctaaaatccaactgtgtgacctgaaatcgggctcacggatccac
gttcttcagggtcacagagcagaagttctgtccgtgcgatggtcgccaagatacgagtat
atcttagccactgccagtgcagacagtaaggtgaaggtttgggacgtgcgccgagcttca
ggtagtctttttactttggatcaacataatggagagaagtcaaaggcctcctctgaagca
gtaaacacagcccataacggcagagtgaatggcctttgctttacatctgatggcctctac
cttttaaccaccgggacagatgaccgcatgagactatggaatagtgctacgggtgaaaat
acgctggtaaattttgggaaggtctgcaacgagagtcgtaaacggcttcagttctccgtg
tctcacggctgcagcccagagtttgtgtttgtgccatgcggcagctcagtggccgtctac
actctccacacaggagagctgatcactatgctcaggggtcactacaacaacgtggactgc
tgcgagttccacccagactaccaggagctgtacagtggtgggaaagatggtaacctgctg
gcatgggttcctgtcgtccgtaatccagatgtggaagaagactcaaaggatgagaaaagg
ggtgctgctggccttcctgctgtgaaccctgcctttcaagacacctggagcagtgatgaa
gattaa

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