Cyprinodon tularosa (White Sands pupfish): 119781171
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Entry
119781171 CDS
T07496
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119781171 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctul03019
]
119781171 (nup98)
03036 Chromosome and associated proteins [BR:
ctul03036
]
119781171 (nup98)
Messenger RNA biogenesis [BR:
ctul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119781171 (nup98)
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119781171 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
119781171
NCBI-ProteinID:
XP_038137487
LinkDB
All DBs
Position
Unknown
AA seq
1808 aa
AA seq
DB search
MFNSSFNTPFGGTTGGFGTTSTFGQQNTGFGTTGGFGTSAFGATTNTGGLFGSTQNKPGG
LFGSSTFSQPATSSTSTGFGFGAASGTSTSLFGNTATNTGGGLFSQQNNAFGANKPNSFG
SFGTSTSSGGLFGSTNTTTNPFGGTALFGGSGFSANQQPGTTVKFAPPTGSDTMVKAGVT
TSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPTNPMAPGTGGLFGGATPTSSASTG
LFGASASNTNFNFGANKSTFGATTGSFGTNAGNLFAQPNQQAAGSLFKPFGATTTTQSAG
FNFANTNTIGQPNTSSMGLFGSTAASQPGGLFGNTQTSTTTGFGTGTGLFAQPNAGFGNV
GTQPSLFGNKASGFGTTTTNAQSFGTGTLFGNKPALTLGTGTNTSNFGFGTNQAGGGLFG
NKTATGGLGAGLGTGFGTVGTGTTLFGNNQNKLGTTLGTMGAFGTTGFNSGGTGLGFGAP
QQPVALTDPNANAAQQAMLQQQLNVLAYSPYGDSPLFRNPLSDPKKKEERLKPTNPTAQK
ALTTPTHYKLTPRPATKVRPKALTSSGASKSQLFDGLDDDEPSLTNGAFVPRKSIKKLVL
KNLNSSQYSNSSLNKENDDLASPSDYPQNGHSQVEEEDIREVPGVSNRTDDDPEVTQFYV
NPIAKPIPQGRVQSSLQDTISDLNMHKQPRNGLELSSDDVSASFGEDSLQEEVEEEQQQE
PKQSPHPAGIVLNKMGYYTIPSLDDLAEMVDENGECVVENFTIGRKGYGSIFFPGEVNLT
GLNLDEIVHFRRKEVIVYPDDKNKPPEGEGLNRRAEVTLDGVWPNDKTTCAQIRSPERLT
DMNYEGRLEKASRRQGARFLEYRPETGSWVFEVTHFSKYGLQDSDEDDDVPPKTDPKKLK
TMMSLPASRLKQLLPPSQQQVAPQAQSTTVDLASGMAELDSDMADITQSVPMESILGAED
GELPLDDTELSKLGGEVLADHELTGSSHIPSSLGINPHTLQIMKASLFTEEEEDDMFQNR
TRGSTDTSSPRVVLSGPLGRPPVGGLLQARFSTSQRLDSPRPSALADPPRPMQWKSPGPA
SFLLPPRVPEPAIRTVGVRRLGGPVPLTESVTQGKGALLMDTGLFATRSFRVGWGPGWTL
AHCGSRLSSQNQHQEVGSKMDFSFMPKPSRNKPLAESPFKVVLEQLVGLEPLQRKTSEEE
EEEDSNAVLQRPLEICLKNSTVSIPEGGACPLVEPQSGVAALHEYAEWITELRERRDDAE
PVLAHWAEVWTLCEALWGRLGPSHQDSEPEPLGEYEQQLQRRRAFSAWLSHGASCRVEKE
VALVGRSRHTEAVFSYLTGSRISEACRVAQKEGDHRLALLLSQAVGSQFCRDLLGLQLAD
WNRMQTDHYMTEDRLRIFVLLAGKAVWQSSESAVNVCSELDWKRCLALHLWYMLPPTASV
ADALAKYEAAFQGSTEAGRYACAPLPPYQEAELPDEEEEESERPLYDLCFHLLKLYSDRH
YSLQPLLDPLTVTWRRLDYRLSWHLWGVLQALNYSHLSVCRQGLVHASYAAQLESAGLWH
MAVFILLHIPDHSQRERAVREMLTLHCPLLETEESVCRERFLTERLLIPESWIHEAKAIR
AHRDGDRRQQALHLYRAGYWNQCHRLLIQHLASDCIINDDHDYLLEFLEGLAVPEHSASI
QDWDTAGRVYLDYIRVIKCLQDIQQMENTGYELERLYADVTSLCSRIELLPCRTAKDRLA
QSEMAKRVANILRVVLSLQQGDGAADPLSIPLAQLAPHISRLPMPEDYTLEELRGLTQSY
LRQLVVSQ
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacagttcatttaacactcccttcggcgggacgacagggggcttcggcaccacg
tcaaccttcggtcagcaaaacacaggttttgggacgacgggaggttttggaacgtctgcg
tttggggcgaccaccaacaccggcggactgtttggctccacgcagaacaaacccggcggc
ttatttggatccagcaccttcagccagccggccacctcctccaccagcactggttttggc
tttggtgccgccagcggaacgtccaccagcctgtttggaaacacagcaaccaacaccggt
ggcgggcttttctcccagcagaacaatgcattcggcgccaacaaaccaaattcttttgga
agctttgggaccagtaccagcagtggtggcctgtttgggtcgaccaacaccaccaccaac
cctttcggtggtaccgccctgtttggaggctctggcttttcagccaatcagcagccaggg
acaacagtgaaattcgctcctccaacaggaagtgacaccatggtcaaagctggtgtgacc
acaagcataaacaccaaacatcagtgcatcacagccatgaaggagtacgagaacaagtct
ctggaggaactgaggctggaggactaccaggcgggcaggaagggccccacaaacccgatg
gccccggggacgggcggcctgtttggtggagccacacccacttccagcgcctcaacggga
ctgttcggtgcctcggcctcaaacaccaactttaactttggggcaaacaagtccacattt
ggtgccactacaggctccttcggaaccaacgcagggaatctgtttgcacagcccaaccag
caggcggccggcagtctcttcaagccctttggagcaaccaccaccacccagagtgccggc
ttcaacttcgccaacaccaacacaataggccagcccaacaccagcagcatgggtttgttt
ggaagcacggcggcttctcaacccggcggcctgttcggaaacacccagaccagcaccacc
actgggtttggaacgggaaccgggctttttgcacaaccaaacgctggctttggaaacgtc
ggcacacagcccagtttgttcgggaacaaagcctctggctttggaaccacgacaacaaat
gctcagtcttttggcaccggtactctctttgggaacaagcccgccctgactctgggaacc
ggaaccaacacctccaacttcgggtttggtaccaaccaagctggaggaggactctttggg
aacaagacggccactggtggactcggcgctgggcttggaaccggctttgggacagttggt
accggaaccactctgtttggaaacaaccagaacaaactgggcaccacgctgggaaccatg
ggagcgtttggaaccacaggcttcaacagcggaggaacgggtctgggctttggggcacca
cagcagcccgttgcgctgaccgacccgaacgccaacgccgcccagcaggccatgctgcag
caacagctcaacgttctggcctactctccgtacggcgactcgccgctcttcaggaacccg
ctgtctgatccgaagaagaaggaggagcgtctgaagccgaccaatccaacggcccagaag
gctctgaccacgcccacccactacaagctcaccccccgacctgccaccaaggttcggccc
aaagcgctcacgtcctccggcgcctccaagtcacagctgtttgacggtctggatgacgac
gagccgtcgctcaccaacggagctttcgtccccaggaagagcatcaagaagctggttctg
aagaacctaaacagcagtcagtacagcaacagcagcctgaacaaggagaacgatgacctg
gcctcgccatcggactacccccagaacggacacagccaagtagaggaggaggacattcgg
gaggttccaggtgtgagcaaccggaccgacgatgacccagaagtcacccagttctatgtg
aaccccatcgccaaacccatcccacagggccgggtccagagcagcctgcaggacaccatc
agtgacctgaacatgcacaagcagccgaggaacggcctggagctgagcagtgatgatgtg
tcagcgtccttcggggaggattctctgcaggaggaagtggaggaggagcagcagcaggag
cctaagcagtctcctcatcctgcaggcatcgttctgaacaaaatgggttactacaccatc
ccctccctggacgatctggccgagatggtggatgaaaatggagagtgtgtggtggagaac
ttcaccatcggcaggaaaggttatggctcgatcttcttccccggcgaggtgaacctgact
ggactcaacctggatgagatcgtccacttcagacgcaaagaggtcatcgtctacccggac
gacaagaacaagccgccggagggggaggggcttaacagacgggccgaggtgactctggac
ggtgtctggccaaacgataagacgacctgtgctcagatccgcagcccagagcgtctgacc
gacatgaactacgaagggcggctggagaaggcctccaggaggcagggagcccgcttcctg
gagtaccggccagagaccggctcctgggtctttgaggtcacccatttctccaaatatgga
cttcaggactccgacgaagacgacgacgtcccgcctaaaactgaccccaagaagctgaag
acgatgatgtcactgcctgcctccaggctgaagcagctgcttcctccatctcagcagcag
gtggcgccacaggctcagtccaccactgtggatctggcgagcggcatggcggagctggac
agcgacatggccgacatcacgcagagcgtcccgatggagagcatcctgggagccgaagac
ggcgagctgccgctggacgacacggagctgagcaagctggggggggaggttctggcggac
catgagctgactgggtccagccacatcccctcctctctgggcatcaacccgcacaccctg
cagatcatgaaggcgtcgctcttcactgaggaagaggaagatgacatgttccagaacaga
accagggggtccactgacacctcgtctcctcgagtcgtcctgtcgggacctctgggtcga
cctccagtcgggggcctccttcaggcccgtttcagtacctctcagcgtttggactccccc
cggccgtcggcgctggccgaccctccacggcccatgcagtggaagagtccaggccccgcc
tccttcctgctgccgcccagagttccagaaccagcgattcgaacagtgggagtccgcagg
ctgggcggcccggtccccctcacagaatcagtcactcagggcaagggggcgctgttgatg
gacacaggcctcttcgccacccgctcattcagggtgggctgggggcccggctggaccttg
gcccactgcggtagccggctcagctctcagaaccagcaccaagaggtcggctccaagatg
gacttcagcttcatgcccaaaccgtccaggaacaaaccgctcgctgagagccccttcaag
gtggttctggagcagctggtgggactggagcctctgcagaggaagaccagtgaggaagag
gaggaggaggacagcaatgcggtgctgcagcgccccctggagatctgcctgaagaacagc
accgtcagcatcccagagggaggcgcctgtcctctggtggagcctcagagcggcgtggcg
gcgctgcacgagtatgccgagtggatcacggagctgagggagcggcgggacgacgcagag
cccgtcctggctcactgggccgaggtctggaccctgtgtgaggccctgtggggccgcctg
ggcccctcccatcaggactcggaaccagaaccgctgggcgaatacgagcagcagctgcag
aggcggcgcgccttctccgcctggctatcccacggcgcctcctgcagggtggagaaggag
gtggcgctggttgggaggagtcgtcacacagaggcagttttcagctatctgacaggaagc
cgcatcagcgaggcgtgtcgggtggcccagaaggaaggagaccaccggctggcgctgctg
ctctctcaggccgtcggctcccagttctgccgcgacctgctgggcctgcagctcgccgac
tggaaccggatgcagacggaccactacatgacggaggacagacttcggatctttgtcctg
ctggccgggaaggctgtgtggcagtcgtctgagtcggcggtgaacgtttgctctgagctc
gactggaagcgctgcctggcgctgcacctgtggtacatgctgcctcccaccgcctccgtg
gccgacgccctcgctaaatatgaagccgcgttccagggctccactgaggctggccggtac
gcctgtgcccccctgcccccctaccaggaggcggagctaccagatgaggaggaggaggag
tctgagcggccgctgtacgatctgtgtttccacctgctgaaactctacagcgacagacac
tacagcctgcagccgctgctcgacccgctcaccgtcacctggcgacgcctggattaccgc
ctcagctggcacctgtggggcgtcctgcaggcgctgaactacagccacctgagcgtctgt
aggcaaggcctggtccacgccagctacgccgcccagctggagagcgccggtctctggcac
atggccgtcttcatccttctgcacatcccagaccacagccagcgagagcgagccgtcagg
gagatgctgacgctacactgccccctactggagacggaggaatctgtctgcagggagcgc
ttcctgacggagcggctgctcatccccgagagctggatccacgaagccaaggccatccgg
gcccacagggacggagaccggcgccagcaggcgctgcacctgtaccgggccggatactgg
aaccagtgccaccggctgctgatccagcacctggcctcagattgcatcatcaacgacgac
cacgactacctgctggagttcctggaaggcctggcagtacctgaacacagcgccagcatc
caggactgggacacggcagggagagtctacctggactacatccgagtcatcaagtgtctg
caggacatccagcagatggagaacaccggatacgagctggagcgtctctatgccgacgtg
acgtcgctctgcagccggatcgagctgctgccctgcaggacggccaaggaccgcctcgcc
caatcagaaatggcgaaacgtgtggcgaacatactacgggtggtgttaagcctgcagcag
ggtgacggtgccgccgacccgctcagcatcccactggctcagttggcgccgcacatcagc
cgcctgccgatgccggaggactacaccctggaggagctgcggggcctgacgcagtcgtac
ctgcggcagctggtcgtcagccaatga
DBGET
integrated database retrieval system
