Cyprinodon tularosa (White Sands pupfish): 119781398
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Entry
119781398 CDS
T07496
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119781398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctul03021
]
119781398
03036 Chromosome and associated proteins [BR:
ctul03036
]
119781398
Transcription machinery [BR:
ctul03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119781398
Coactivators
SAGA/TFTC/STAGA complex
119781398
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
119781398
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
DNA_pol3_gamma_R_C
Motif
Other DBs
NCBI-GeneID:
119781398
NCBI-ProteinID:
XP_038137755
LinkDB
All DBs
Position
Unknown
AA seq
837 aa
AA seq
DB search
MDGTAGITPAAEHSTTAAQSHTAASDATADKQPAAAAPALDESGAVMNCHIPGSGQSDRS
PTAAVNGPSSASPGFIIRTSVDAQNSAISSGDSSQCSVKTVPTVALVRPPIQTSNTVLSS
GSLSDSCKAEPSKTITPTGAQVPASSVLTTTTSTMRSPTVLQNMRTTFSPTIGGSLPGVT
RTIAPQVLAPRATQPNQNTTGVQNFQLPPGMVLVRSESGQLLMIHQQTLAQMQAQAQSQS
AITPRPVAPSTTPSVQVTASQTPGAPLLARSVTPTTIIKQGSPVQTTVTTTATLQRPPVL
QNTIVLGGNASSSGQALGTSATVQATTVVTQRVAPLGATGAPLAPIAISAETLENVKKCR
NFLSTLIKLASNGKQSSETTASVKELVKSLLEGRIEPDDFTKQLYKELNSSPQPYLVPFL
KRSLPALRQMTPDSEAFIQQSLLPQPSTQPTAAASTALGAVVLRPPLPPTATAATGTAAT
KATVITLSHKANSKPGVVVPQQPGGTVRPQVTLAQSPLVTIRGAAPSRIIVGQPQIVRQI
SRVSMVKQTVVPGARGVKVINPASPINVQNKLKEAGGGTFKDDDDINDVASMAGVNLSEE
SARIMATSSELVGIVTRSCKDEAFLSISSLTRIVLQIGKRFGVSELGTDVISYISHATQQ
RLQNLLEKASHVAQQKNINFREDERCEQVSDVRAQLKFFEQLDQMEKQRKEEQEREILLK
AAKSRSRQEDPEQLRLKQKAKEMQQLELAQIRQREANLTALAAIGPRKKRKTDSPLSGAS
AEASGSGPTQPGGSNGPGSRQFMRQRITRVNLRDLLLCLENDRETSHSQLLYKGLLK
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggatgggacggctgggatcacaccggcggctgaacacagcactacagccgcgcaaagt
catacagcagcatcagatgcaacagctgacaaacaaccggcggctgccgctccagctttg
gatgaaagcggcgcggtgatgaactgtcacatccccggaagcggacagtcggacagatct
ccgacagctgctgtcaacggaccctcctctgcatcacctggttttattattcgaacttct
gttgatgcacaaaacagtgcgatctcttctggggattcatctcagtgttctgtgaaaact
gttcccactgtggcgctggtgaggccaccgatacaaacttccaacactgtcctgtcatca
gggagcctcagtgattcctgcaaagccgaaccttctaaaactataaccccaaccggtgct
caggtccctgcttcaagtgttttgacaactacgacttccactatgaggagtccaactgtg
ctacaaaacatgagaactacattttcgccaacaatcggtggcagcctgcctggggtaaca
cggaccatcgctccacaggtgttggcccctcgggccactcagcctaatcaaaacaccaca
ggtgtccaaaacttccagctccctccaggtatggtgttggtacgcagtgagagtgggcag
cttctgatgattcaccagcagaccttggctcaaatgcaggctcaggcccaatcacaaagc
gcaattacgccacgacctgttgccccgagcaccacgccgtctgtccaggttacagcctct
cagactcctggggctcctctgctggctcgctcagtaactccaaccaccatcatcaaacag
ggttcccctgttcaaactacagtcaccaccaccgccacactgcagaggcctccagttctc
cagaatactattgtactgggaggaaatgcgtcttcttcaggtcaggcccttggaacatca
gcaacagtccaggcaacgacagtagtgactcagagggtggcgcccctcggagccactggg
gcgccccttgctcctatagccatctcagctgaaacattagaaaatgtgaaaaagtgtaga
aactttctgtctacactcatcaaattggcatcaaatggaaaacagtcatcggagactaca
gccagtgtcaaagagcttgttaagagcctgctggaaggaaggatagagcctgatgatttc
accaagcagttgtacaaggagcttaactcttcccctcagccataccttgtccccttcctt
aagagaagtcttccagctttgcgccaaatgaccccagactcagaggccttcatccagcaa
agccttctgccccagccaagcactcagccaactgcagcagcctccacagccctcggcgct
gttgtgctgcgacctcctcttccccctacagccactgcagccacaggcactgctgcaacc
aaagccaccgtcattaccctgtcccataaagccaacagtaaacctggagtggtggtacct
cagcagccgggcggcacagtgaggccacaggtgacgttggctcagtctcctttggtgaca
atccgaggagcagctccgagccggattattgtcggtcagccacagattgtcaggcagatt
tcacgagtctccatggtgaagcagaccgtagttccaggggccagaggagtaaaagtgatt
aacccagcgtctcccatcaatgtccagaacaagctgaaggaagctggaggaggaactttc
aaggatgatgatgatatcaatgatgtggcttccatggcaggagtcaatttatctgaggag
agcgcccgcatcatggcaaccagctctgaactggtggggattgtgacccggtcctgtaag
gacgaggcttttctctccatctcctctctcactcggatagttctgcagatcggaaagagg
tttggtgtcagcgagttgggcacagatgtgatcagttacatttcccatgctacacagcaa
cgactgcagaaccttttggaaaaggcttcacatgttgcacagcagaagaatataaatttt
agggaggatgagcgatgtgagcaggtcagcgacgtgcgagcgcagctcaaattctttgag
cagctagatcagatggagaagcaaaggaaggaggagcaggagagagagatcctgctaaag
gctgctaagtccaggtcaaggcaagaagacccggagcagctgagacttaaacagaaggcc
aaggagatgcagcagctggagttggcccagattaggcagagagaagccaacctaacagct
cttgcagcaatcggtccaaggaaaaaaagaaaaacagactcccctttaagtggtgcaagt
gcagaggcttcagggtcaggtcccactcagcctggaggctccaatggacctggttccaga
cagtttatgcgacagcgcatcaccagggttaacctccgggacctgcttttatgtctggag
aatgacagagagaccagtcactcccagctgctctacaaaggtctccttaaatag
DBGET
integrated database retrieval system
