Cyprinodon tularosa (White Sands pupfish): 119781472
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Entry
119781472 CDS
T07496
Symbol
apex1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119781472 (apex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctul03400
]
119781472 (apex1)
Enzymes [BR:
ctul01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
119781472 (apex1)
DNA repair and recombination proteins [BR:
ctul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
119781472 (apex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
119781472
NCBI-ProteinID:
XP_038137880
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
MKRGKNTEEAAAEGENDTGSASTKKAKKTKEPEAPILYDDPPDKTTSKDGRSANMKITSW
NVDGLRAWVKKNGLNWVREENPDVLCLQETKCSEKALPAEITSMPEYPHKYWAVSDDKEG
YSGVAMLCKTEPLKVTYGIGKEEHGREGRVITAEFPNFYLVTAYVPNASRGLVRLDYRKT
WDVDFRAYLSELDIQKPLVLCGDLNVAHQEIDLKNPKGNKKNAGFTPEEREGFSQLLEAG
FVDSFRELYPEQANAYTFWTYMMNARSKNVGWRLDYFLLSSSLLPGLCDSKIRNKVMGSD
HCPITLLVAV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaggaaagaacacagaggaggcggctgcagagggggagaatgataccggatca
gcttctacaaagaaggccaagaaaacaaaggaacccgaggctccaattttgtacgatgac
ccccctgataaaacgacaagcaaagacggacgcagcgccaacatgaagatcacctcctgg
aacgtggatggactcagggcgtgggtgaaaaagaatggcctgaattgggtgcgtgaggag
aacccagacgtcctgtgcctccaggaaaccaagtgctcagagaaagcccttcctgctgag
atcacgtctatgccagagtacccccacaagtactgggctgtgtccgatgacaaggaggga
tacagtggggtagccatgctgtgcaagactgaacctctgaaagtgacctatggaattggc
aaagaggagcatggcagggaggggcgtgtcattactgctgagttcccaaacttctatttg
gtgacggcctacgtccccaacgccagcagaggcctcgtccgcttagattaccgcaaaacc
tgggatgtcgacttcagagcttacctcagcgagctagacatccagaagcccctggttctg
tgcggagatctcaacgtggcacaccaggagatcgacctgaagaacccgaagggcaacaag
aagaacgcgggattcaccccggaggagcgcgaaggcttcagccagctgctggaggcgggc
ttcgtggacagcttccgtgagctgtaccccgagcaggccaacgcctacaccttctggacc
tacatgatgaacgcacgatctaagaatgtcggctggaggctggactatttcctgctgtca
tcttctctgctccccggcttgtgcgacagcaagattcgcaacaaggtgatgggcagcgac
cactgcccaatcacgctcctcgtagctgtgtga
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