Cyprinodon tularosa (White Sands pupfish): 119781530
Help
Entry
119781530 CDS
T07496
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119781530 (exosc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctul03019
]
119781530 (exosc2)
Messenger RNA biogenesis [BR:
ctul03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
119781530 (exosc2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
119781530 (exosc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
EXOSC1
Motif
Other DBs
NCBI-GeneID:
119781530
NCBI-ProteinID:
XP_038137951
LinkDB
All DBs
Position
Unknown
AA seq
293 aa
AA seq
DB search
MAVDMRLPTIKTSMSLSVPAAGRKDLVVPGDVITSDTGFMRGHGTYVDEDKLTASVAGEV
QRVDKLICVRPLKTRFNGEVGDVVVGRITEVQQKRWKVETNSRLDSVLLLSSVNLPGGEL
RRRSAEDELTMREYLHEGDLISAEVQSVFSDGALSLHTRSLKYGKLGQGVLVQLSPSLIK
RQKTHFHNLPCGASIILGNNGFVWLYPTPGQQEQEAGGFYTSLEPVSLSDREVISRLRNC
LLALAAHKVLLYDTSVLYCYESSLQHQVKDILKPEVMEEIVMLTQQKLLEQEG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggctgtagacatgagattaccaactattaaaacatcaatgtctctgtcagttcctgct
gctggccgaaaggatctggttgtcccgggagatgttatcacttcagacaccggctttatg
aggggacatggcacttatgttgatgaagacaagctgacagcatcagttgctggagaggtt
cagagggtggacaagctaatatgtgtcagaccccttaagacaagattcaatggtgaagtt
ggagatgttgtagttggcagaattacagaggttcaacagaagcgttggaaggtggaaacg
aactccagactggactctgtcctcttgctttcatctgtcaacctgcctggtggagaactg
aggagaagatcagcagaagatgagctcaccatgagagaataccttcatgaaggcgatctc
atcagtgcagaggtgcagtctgtcttctcagatggggccctgtcacttcacactcgcagt
ttaaagtatggaaaattgggtcagggagtgctggtgcagctttctccttcactaatcaag
aggcagaaaacacatttccataacctaccctgtggcgcatccatcatcttggggaataac
ggctttgtgtggttgtatccaacgccgggacaacaggaacaggaagctgggggcttctac
accagtctggagcctgtaagcctgtcagatcgggaggtgatttctcggctcagaaactgc
ctgctggctttggctgcacataaagtgcttttgtacgacacaagtgttctgtattgttac
gagtcctccctccagcatcaggtcaaggacatcttgaaaccagaagtgatggaggagatt
gtaatgttgacacaacagaagctgctggaacaggaaggttaa
DBGET
integrated database retrieval system
