Cyprinodon tularosa (White Sands pupfish): 119781547
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Entry
119781547 CDS
T07496
Name
(RefSeq) nipped-B-like protein B
KO
K06672
cohesin loading factor subunit SCC2
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119781547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ctul03036
]
119781547
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
119781547
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
Cnd1
HEAT
Motif
Other DBs
NCBI-GeneID:
119781547
NCBI-ProteinID:
XP_038137976
LinkDB
All DBs
Position
Unknown
AA seq
3013 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTAKSLLYNGRISDEVSSLLVCRDEN
LVTQLAHSLNQVSTEHIELKDNLGNDEPEGDMPILLQTLLSRNPRIFRDKSVLQQPLIQQ
YKISQNQVHGSPASNYQQSPSGCFTSPQCGSASQFVPQQNSPIPSPYTPQSPADYIQYNP
PSYSHQTQQVVGGVRTILDNKVSEQLSSNPSNHNTKAGLDEEYINVAQRLGNEENDSSIK
AAVFSVCEESPKKPRPSLIMQSPSLDVPQAAAPDLLLNTADRRKRQRERSKEENENMDKN
VFYDIVSSPSKDSARLTLKLSRVKIPDMGRSEELLPTSPMDGDHETVVLNNDIQSSSSPQ
DFSHKSEVNEEANCQQVAAQPNTKETGVISGIVFDDSEIEALAEIERMESANEKERCSKE
VQDKDKPLKKRKQDTYPQEPGIETNEGPSVHLGSPVSKLTPKKSSAASNGAGRPALMVSI
DLKQAGRVIGQPVVVLEQQPLCKDHLRRLKTSADPENRPGIIKKLPDTSQISGCDGRTES
SKQKQENMRESKRNQNSKPGSDRGHSEDRCVAWLTHDIHSDLSPKDETNNNSHRSQINKA
ETPKSISKVERNSRYEEEKGRSKEKDKDRDRQREKDGDKEKLSDREQSSERDKNEDKDQD
RVTDKLRDKARDRVKSREKDKSIEMDKYEDRDQERVKEKLREKARDREKNRERDKSIEMD
KVEDKGQDRVKGKFRDKVRDLEKPREKDKPFEIDRDEDKDQVRVKGKLRDKVKDLEKSRE
KDKSTDVDRDEDKDQERVKGKLRDKVKDREKPREKDKPTDMDGDKDKDQDRVKGKLRDKV
RDREKPNEKDKPTDIDRDENKDQERVKGKLSGRDKCRDGENQKEREKSRAEEKSRERRSD
EDKNLERLKSKVRDRDKDGEKVRGRDKSIDLDKDEDDGEGVKDKVRDKDKIRDKGRKRER
DKLRERDKEEGKDQDRVRDKFRDKEKSRGRDKSTEMDKDEDKDLERVKDKVKERDKIKDR
EKLRGGEKGQSEKGRHMDENFDINSEQDKDVKRDRDKDKEKGKEKNREKDRDRNKKHKMA
SEGKANRNPAEEQTKSDSPKLKQDEGRKSAELTDRQRTSSSSLQTTPNKEQRTSGDSSTS
QPASKRQGSERKAIDLPPYLLGGNSGSLKNFVIPKLKRDGKDGADKDLRLKSKLIDTWSE
PLVRLERVSLVENLNKRTKPVVVVKKLSIEDVKRIMKETKNAHRSRQWSSYDSSDRERAN
KRRHSMISKRSKYAEVDSDNEEVEEDDDEESESEDESPRKKKKKSHDKAWKMEERKGSRD
HKRSGSFHNSRRGSSGRQRDWSSNDDSDEHSPPPSLNDVARKMKKQKSRTAYDSKMTTEE
KMDSSAYRRFVTNVDNILESLEDVDLTAADDDEIPQELLLGKQQLNELCSDSTKIKAMGI
FSKFSSSKLVKILNILEKNIQDSVTLSTLMSQDNDSMDEERLWRDLIMERVTKSADSCLT
ALNIMTSPHMPKAVYIEDVIERVLQFTKFHLQNTLYPQYDRSYRAGASHTSKSKKPKSSA
HKQKVVTVLYNKVCDIISFISELLEIQLLTDTTILQVSSLGITPFFVENVSELQLCAISV
VTAVFSRYEKHRQLILEEIFTSLARLPTSKRGLRNFRLNSSDSDGPALYIQMVSALVLQL
IQCVVNLPSEKETDEEPKKKVDKDVLITNSYETAMRTAQNFLSVFLKKCGSKQGEDDYRP
LFENFVHDLLSAVNKPEWPAAELLLSLLGRLLVHQFSNKQTEMALRVASLDYLGTVASSL
RKDSLSSKMDQRTINRILKETPGSDEILQLQKALLDFLDENIDADPALLFARNFYIAQWF
RDTTVEVEKAMKSQTENDDDPKYRRHSTDSDTAAEIVQTVEARKKFLRKVIKTTPLNFSS
VKISSDTLDYEDSCLIVRYLASMRPFAQSFDIYLSQILRVLGESAIAVRTKAMKCLSEVV
AVDPSILGRVDMQRGVHGRLMDNSTSVREAAVELLGRFVLSRPELIEQYYDMLIERILDT
GISVRKRVIKILRDICLELPDFHKITEMCVRMIRRVNDEEGIKKLVNETFQKLWFSPTPS
HDKEAMNRKILNITDVVLACKDSGYDWFEQLLQNLLKSEEDASYKPTKKACVQLVDNLVE
HILKYEESIADCEDKGINSSRVVACITTLYLVTKIRPNLMVKHAMAMQPYLNTKCSTQND
FMVICNVAKILELVVPLMENPSESFLNTIEEDLMRLIIKHGMTVVQHCVSCLGAIVNKVT
HNYKFVWSSFNRFYGALAKLKTQHQEDPSSSTLAANKPTLLRSLFTVGALCRHFDFDLEE
FKGASKIIIKDKVLELLLYFTTHEDEEVQIKAMTGLGFQFIMHPELMFVQDVKVLYISLL
SDESSSVNLKIHVLKNLQTYLQEEDSRMQEADREWNKQAKQEDLKEMGDISSGMSSSIMQ
IYLKQVLESFFHSQSTVRHFALSVITLTLSQGLIHPVQCVPYLIAMGTDPEPTMKNKADQ
QLVEIDKKYSGFIHMKAVAGLKMSYQVQQAINGGKRAVIRGFRHDDSDTALCYHLYTLVR
GNRQHRRAFLISLLNLFDDSSKTEVNMLLFIADNLACFPYQTQEEPLFIMHHIDITLSVS
GSNLLQSFKECLRKEPVRHEKKVKTKKRKKKHHRKRKNSSDEEEEDEDEEKSSSSSSSSS
SSSSSSSDEEEEKVRKRKKPGGCDSDSDLDDEDAVMDRLPENPAPLLEFASASQGILLLL
VLKQHMKNLYGFSDSKIQKYSPTESAKVYDKAVNRKSKVNFNPRQTLEYLKNDVANRELS
YETKRNIVKQFLDFKVLMEHLDRDEEDEDGGEAKANARNKAINSLLKGPKPQNHNHSNHT
APVETEDEDSEDEDPPARKPRKDVDSAEDAGQVVEVMDIVAICRPKYKDRPQIAKIIQKN
RSGYSIHWMTGSYSGPWAVAKKRDGRKKVPWVDNIKESDIIYKKISLTSGQKLTNKVAQT
LRALYASRDGTKS
NT seq
9042 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtgatatgcctcatgttcccatcactactcttgctggaattgctagcctaact
gacttgttgaaccagctgcctttgccctcccctcttccggccaccactgctaagagcctg
ctttacaatggaaggatctccgacgaggtcagcagcttgttggtgtgtcgagacgagaat
ctggtgactcagctggcccatagccttaaccaggtctccactgaacatatagagctaaag
gacaacctgggaaatgatgaacctgagggtgacatgccaatacttctccaaactttgctg
tccaggaaccccaggatcttcagggacaaaagtgtattacagcaaccattaatacagcag
tacaagatttctcagaaccaagtgcatggaagtccagcatcaaactatcagcaaagcccc
tctggatgctttacgtccccacagtgtggctcagcttctcagtttgtaccccagcagaac
agtcctatacctagcccctacaccccccagagtcctgcagactacattcagtacaatcca
cccagttactctcatcagactcaacaagttgtcggtggtgtgagaacaattcttgacaac
aaagtctctgaacagctgtcaagtaatccatctaaccataatacgaaagccggtttggat
gaagagtacataaacgtggctcagagactgggaaatgaggagaatgactcttccataaaa
gccgccgtattctctgtttgtgaagagagtccaaaaaagcccaggccttctctcatcatg
cagtcaccatcacttgatgtgccacaggctgcagcacctgacctgctccttaacactgcc
gaccgtagaaagaggcagcgagaaaggagcaaagaagaaaacgagaacatggacaaaaat
gtcttctatgacatagttagctctccatctaaggactctgccagattgactttaaaactg
tctcgagtgaagatcccagacatgggccgctctgaagaactcctcccaacctcacctatg
gacggagatcatgaaacggttgttctaaacaatgatattcagtcatcaagttctcctcaa
gatttttcgcacaagtcagaggttaacgaggaagcaaactgtcaacaagttgctgcacag
ccaaacaccaaggagaccggagtcatcagtggaattgtgtttgatgactctgagattgaa
gcacttgctgagattgaaagaatggaatcagccaatgagaaagagcgatgctctaaggag
gtccaagataaagacaagcctctaaaaaaacggaaacaagacacataccctcaggaacct
ggcattgagacaaacgaaggaccatctgtacatttgggtagccctgtcagcaaactgaca
cccaagaagtcgagtgctgcgagtaatggtgccggtcggcctgccttgatggtcagtatt
gatctgaagcaagctgggagagtaataggtcagccagtagttgtcttggaacagcagccg
ttgtgtaaagatcacttacgtcgccttaagacaagtgcagatcctgaaaaccgacctggg
atcatcaaaaagcttcctgacacttcccagatttctggttgtgatggacgtacagaaagt
agtaaacagaagcaggaaaacatgcgtgaatcaaaacgcaatcaaaatagtaaacctggc
agtgataggggacactcagaggacagatgtgtagcgtggctaacacatgacatacattca
gatttgtcccccaaagatgaaacaaacaacaacagccaccgatcccaaataaacaaagcc
gaaacgccaaaatccataagcaaggtggaacgcaactcacgatatgaagaagagaaaggc
aggagcaaagaaaaggataaggacagggatagacagagagaaaaagatggagacaaagaa
aagctcagtgatcgagaacaatccagcgaaagagacaaaaatgaagacaaggaccaggac
agagtcacagacaaacttcgagacaaagccagagaccgagtaaaaagcagagaaaaagac
aaatccattgagatggacaagtatgaagacagagatcaggagagagtcaaagaaaaactt
cgagaaaaagccagagatagagaaaaaaacagagaaagagacaaatccattgagatggac
aaagttgaagacaagggtcaggacagagtaaaaggcaaatttcgagacaaagtcagagat
ctagaaaaacccagagaaaaagataaacccttcgagattgacagagatgaagacaaagat
caggtcagagtcaaaggcaaacttcgagacaaagtcaaagacctagaaaaatccagagaa
aaagacaaatccacagatgtggacagagacgaagacaaagatcaggaaagagtcaaaggc
aaacttcgagacaaagtcaaagatcgagaaaaaccaagagaaaaagacaaacccacagat
atggacggagataaagacaaagaccaggacagagtcaaaggcaaacttcgagacaaagtc
agagatcgagaaaaacccaatgaaaaagacaaacccacagatattgacagagatgaaaac
aaagatcaggagagagtgaaaggcaaacttagtggtagagacaaatgtagagatggagaa
aaccaaaaagaaagagaaaaatccagggcagaggaaaagtcaagagaaagacgcagtgat
gaggacaaaaacctggagagactcaaaagcaaagtcagagatagagacaaagatggagaa
aaggtcaggggaagagacaaatccatagatttggataaagatgaggacgatggagaggga
gtcaaagacaaagttcgagataaagacaaaatcagagacaaaggaagaaaacgagaaaga
gacaaactcagagaaagggataaagaggaaggaaaagatcaagacagagtcagagacaag
tttagagataaagaaaaatccaggggaagagacaaatccacagagatggacaaagatgaa
gacaaagaccttgaaagagttaaagacaaggttaaagaaagggacaaaatcaaagacaga
gaaaaactcagaggaggagaaaaaggtcagtcagagaaaggcagacacatggatgaaaac
tttgacattaacagcgaacaagacaaagatgttaagagagacagagataaagacaaagaa
aaaggtaaagaaaagaacagagagaaagacagagacaggaacaaaaagcacaagatggcg
tcagaaggcaaagctaacagaaacccagcggaggagcaaactaaatctgacagccctaaa
ctgaagcaagatgaaggcagaaaatcagctgagctcacagatcggcaaaggacttcctct
tccagcctgcagaccaccccaaacaaagagcagcgaacaagtggggacagcagcacaagc
caacctgcaagcaaacggcaaggctctgagagaaaagccattgatttgccaccgtacctg
ctgggtggcaattcaggaagtctcaagaactttgtgattcctaaactgaaacgagatgga
aaagacggagcagataaagatctcaggctcaaaagcaaactgatagatacctggagtgaa
ccattggtgcggttagagagagtttctctggttgagaacttgaacaaaagaactaaacca
gtcgttgtggtcaagaaactcagcatagaggatgtaaaacggatcatgaaggaaaccaag
aatgcacacagatccagacagtggtcctcctatgactcttcggacagagagagagcaaat
aagcgaaggcacagcatgatcagtaagagatccaaatatgctgaggtggattcagataac
gaggaggtggaagaggatgatgatgaggagtctgagtctgaggatgagtctccaagaaaa
aagaaaaagaaaagccacgacaaagcttggaagatggaagagaggaaaggttctagggat
cacaaacgaagtggaagttttcataactctcggcggggttcaagtggccgtcaacgggac
tggagcagcaatgatgattcagatgaacactcgcctccaccgagcctgaatgatgttgcc
cgaaaaatgaaaaaacagaaaagcagaacggcgtacgattccaagatgacaacagaggaa
aaaatggactcatctgcttataggaggtttgtaaccaacgtggacaacattctggagagc
cttgaggatgtagacctcactgctgcagatgatgatgagatacctcaagagctgttgctt
ggaaagcagcaattaaacgagctttgcagcgattctaccaagattaaagccatgggaatc
tttagcaagttttcttccagtaaactggtgaaaattctgaatatattggagaaaaacatt
caggacagtgtcaccctttccactttaatgagtcaagacaatgattcaatggatgaggaa
cggctgtggcgtgacctcatcatggagcgggtgaccaagtctgcagattcctgtttgact
gcgcttaacataatgacgtccccacacatgcccaaggctgtttatatagaggatgtgatc
gagagggtgttgcaatttaccaagttccacctacagaacactttgtaccctcagtatgac
cgttcataccgagcaggtgcctcgcacacttcaaagtccaagaaaccaaaatcctctgcc
cacaaacagaaagtggtcacggtgctctacaacaaagtttgtgatattatcagcttcatc
tcagagctccttgaaatccagctgctcactgacaccaccattctccaggtgtcaagcctt
ggaattacgcctttttttgtcgagaatgtcagtgaactgcagttatgcgccatttctgtg
gtgacagcagttttctctcgctatgagaagcacaggcagctcatccttgaagagattttc
acgtccctcgccagacttcccacaagtaaacgtggtctcaggaactttaggttaaacagc
agcgattcagacggacctgcactgtacatccagatggtctcggctctggttcttcagctc
attcagtgtgtggttaaccttccatcggagaaggagacggacgaggaacctaaaaagaag
gttgataaagatgtcctcattaccaactcttatgaaactgccatgaggacagctcaaaac
tttctctctgtatttctcaaaaaatgtggcagtaaacagggagaagacgactacaggcct
ctgtttgagaactttgtacatgacctgctgtcagccgtcaacaagcctgagtggcctgca
gccgaactgctgctcagtttactgggtagactgctggttcaccagttcagtaataagcag
acagaaatggcgctcagggtggcgtccctcgactacctcggcactgttgcctccagcctg
cgtaaagactctctctcttccaagatggaccaaagaaccatcaatcgcatccttaaagag
actcctggtagtgatgagatactgcagctccaaaaggctctgctggatttcctcgatgaa
aacattgatgcagatcctgctttattgtttgcgaggaacttttacattgcccagtggttc
agagacactacagttgaggtagaaaaagcaatgaagtctcaaaccgagaacgacgacgat
cccaagtaccggcggcattccacggattcggacacggccgcagagattgtgcagacagtt
gaggcacggaaaaaattcctccgtaaggtcatcaagacaacaccactgaacttcagctct
gtaaagataagctctgacactttagactatgaggactcctgtctgattgtcagatatctg
gcctctatgaggccatttgcacagagctttgatatttatctatcacagatcttgagggtc
ctgggagagagcgctattgcagtgagaactaaagccatgaagtgtctatcagaggtagtg
gctgtggatccaagtatattaggaagagtggacatgcagcggggggtgcacggtcgtcta
atggacaactccactagtgtcagagaagcagccgtggagcttcttggccgcttcgtgctc
agtcgacctgagctaatcgagcagtactacgacatgcttattgaaaggatactggacaca
ggaatcagtgtgagaaaaagagtcattaagattcttagggacatttgcttggagctgcca
gatttccacaagataacagagatgtgtgtgaggatgatccgcagagtcaatgacgaggaa
gggatcaagaaactggtgaacgagacgttccagaaactctggttttcaccaacacccagt
cacgataaagaagctatgaacagaaagatcctgaacatcacagatgtggtgttggcatgc
aaagattcaggatatgactggtttgagcagctcctacaaaatctgctaaaatcagaggag
gacgcttcatataaaccaaccaagaaggcttgtgttcagttggtggacaatttagtggag
catatactaaaatatgaggaatctattgcagactgcgaagacaaagggataaactccagc
cgtgtggtagcgtgcatcaccaccctttatctggtgactaaaatcaggcctaacctcatg
gttaaacatgcaatggctatgcagccctacttgaacacaaaatgcagcactcagaatgac
ttcatggttatttgcaatgtggccaagatcttggagctggtcgtacctctgatggaaaat
ccaagcgagtcgttcctcaacacgattgaggaagacctgatgaggctcattattaaacac
ggcatgacggtggtgcagcactgtgtgagctgccttggtgccattgtgaacaaggtgaca
cataattacaagtttgtgtggtcttctttcaatcgcttctatggagctctggctaaactc
aagacgcagcaccaggaggaccccagcagctccactctggctgctaacaagccaactctg
ctgcgctcattgttcactgtgggggctctttgtcgacactttgattttgacctagaagag
ttcaagggagcgagcaagatcatcataaaggacaaggttttggagcttctgctgtacttt
accacccatgaggatgaagaggtccagatcaaggccatgactggtttaggcttccagttc
atcatgcatccagaactcatgtttgtgcaagatgtgaaggttctatacatcagtttgctg
tcagatgagagcagctctgtcaatctgaagatccatgtgctcaagaaccttcaaacgtac
ctacaggaggaggactcccggatgcaagaggcggatcgggaatggaataagcaagcaaag
caggaagatctgaaggaaatgggagacatctcctcaggcatgagcagctccattatgcag
atttacctcaagcaggtgctggagtccttcttccactcacagtccaccgtgcggcacttt
gctctcagcgtcatcacactgactctgagtcagggcctcatacaccctgtacagtgtgtc
ccctacctgatcgccatgggaacagatccagagccgaccatgaagaacaaggcagaccaa
caactagtggagatcgataaaaaatattcaggattcattcatatgaaggctgttgccggg
ttgaagatgtcctatcaggtccagcaggccataaatgggggcaaacgcgcggtgatccga
ggtttccgtcacgacgattccgacacggctctctgttaccatctctacactctggtccgt
gggaacagacagcacagacgggccttcctcatctccctgctcaacctgttcgatgacagc
tctaaaacagaggtaaacatgctgctcttcatagcagacaacctggcgtgctttccttac
caaacccaggaggagcctcttttcatcatgcaccatatagacatcactctgtctgtctct
ggtagcaacctgcttcagtctttcaaagagtgtttacggaaagagcctgtaagacatgaa
aagaaggtgaagacaaagaagagaaaaaagaaacatcatcgtaagaggaaaaacagttct
gatgaggaggaggaggatgaggatgaagagaagagcagcagctcatccagcagcagcagt
agcagtagcagcagcagcagcgatgaagaggaggagaaagtccgcaagcgaaagaagcct
ggaggctgtgactcggactcggatctggatgatgaggatgctgtgatggaccgtctgcct
gaaaaccccgcccctctgctggaatttgccagcgcctcacagggaatcctgctgctgctg
gtgctcaagcagcatatgaagaatctttacggcttctcagacagcaaaatccagaagtac
tcaccgaccgagtccgccaaagtttatgacaaggcagtgaacaggaaatctaaggtgaac
ttcaaccctcgtcagacccttgaatacctgaagaacgatgtggccaacagagagctcagc
tatgagactaagaggaatatcgtcaaacagtttttggatttcaaggtgctaatggagcac
ttggaccgtgatgaggaggatgaagatgggggtgaagcaaaggctaatgccagaaacaaa
gccatcaattcgctgctgaagggcccaaaaccacaaaatcacaaccacagtaaccacact
gctccagtggagacagaagatgaggacagtgaagatgaagaccctcctgcccgaaaacca
agaaaagatgtggattctgctgaggacgcgggtcaggtggtggaggtaatggacatagtc
gccatctgtcggcccaaatacaaagaccgaccgcagatcgccaagatcatccaaaagaac
aggagcggctacagcatacactggatgacgggatcttactctggaccttgggccgtggca
aagaaacgggacggtcgcaaaaaggtgccttgggtcgacaacatcaaggagtcggacatt
atttacaagaaaatctccttgacaagcggacagaagctcacgaacaaagtggcacagact
ttacgagcgctctacgcgtccagggacgggacaaagagttaa
DBGET
integrated database retrieval system
