Cyprinodon tularosa (White Sands pupfish): 119781807
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Entry
119781807 CDS
T07496
Symbol
crocc2
Name
(RefSeq) rootletin
KO
K16469
rootletin
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ctul03037
]
119781807 (crocc2)
Cilium and associated proteins [BR:
ctul03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
119781807 (crocc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rootletin
Motif
Other DBs
NCBI-GeneID:
119781807
NCBI-ProteinID:
XP_038138317
LinkDB
All DBs
Position
Unknown
AA seq
1856 aa
AA seq
DB search
MMSSPQEQAGLSPRLEAVIQRLEETLLHSDGSSAEVSLALQGDEEGSRATLLPISTRICQ
IITRNLTEQPAGESLEVSKLEGSGALREHSSPSQKDGDQLLVKQTSLTERADLDSAERQK
NEDQDLHLTIQKRSAQLQEERSRTARLSQVNSLLREQLDQVDTVNKGLTESLWKARKDAE
WVDNRLRREQETYASRLNREQARVRALWRQAASLRSTFTHLKTFTDRTLSDMRGECAAVC
QLLHVACKSLETREAAKNRCCGSETSVLGMELKKKLKETMELQVLWDGEKSELNSRILEL
TDTLNCIQKQNSESDTSLSTKQISLEEMETMRAEDMTEVVLLRREVQTLQTILYQIHEMV
CSEDEKSTTENMSASPLHAKFPSKTGTLIAVQNVLSKHDKESQEIHGRLKAALEQVDAFK
DQLHEQNAQRAKLEQKIQEMQREHQEVQKALEESLEENSRSRCTLELISNEKGSLEKLLS
GLQQEVDSQRAELDVLRSSSLDLQRQRDLLRQQKEGLEVQLSRQHTEASRGEKDLQELGR
KCSDLRRELITVKESLDQITLQKEMLEDDKASLSLALDKMERHSAARDTLLIKLQSQHAT
LRDSLIKMAALSEGLAKDKVELNRIVLQTEGEKTELSERRCEAEGKRAAAREDAARAQKE
MMNLLAEKQAFESSHVQLQYLCQKLEAELSLLHRERAEALEKQSEVKRQMQTLQEELCAC
RKELDEKTTAVRRAAQDREEIAKDKAALEVKLNSADRKACSLKQELIALRAEKNSLETAI
FESQELSASLEAELTRLEGERYSLNLANEALTCEAAQMRVDAEKQLQQAAKQRGVWEEKL
AEVERNALLMLNKKEQSHREQLEAEQKRMEQQFAEFTVQQQQIEEQLRTQCEELRVHNQS
SMQQMQDELAKLQKEFSQSLLQAESDKQQALFQQEAEKAALTEKIASLQQDLEMERMQKE
ALSKQHPDKNAVIMKCELEALQSKFEESLASHQSSRMSLMEQIRELSQQKAKAKQELEGL
RRQLQVTEDNLLKGQKDLMEAHNKLQGCVEERDKLRKEALELRRTLSEETREKEAILVSN
QDLRAFIKRAERDNNSLKRALEEEERNKSILEECKSSTHEEAATLRRTIRELEKTHLQAR
RELQELRRQIKVLENKNKQQNQELLELQDQVCQEEQRKEEARREASALSQRMLECEAAKQ
AALSEVSCMQRRIRELETAEQQSQRLLHEKEAYQQQSDQSHRETTAQLEEILEDYKTQIK
ELSVKLVLAENRAQSLEEQLNVSKAKCCHLEHHLAALYAALRCTRLCDTRESTQASPSRR
HFQVKGGEYGTEESGIFSLNSEDGDLNIKSIQTSLQEFMKELRDAQRERDEAQAQIVRLK
QHVTELKASQEKSLNQMQELQSSLRLSEEGKQEISKQLQKVQTSLALQHDVTQCKEKESR
NLEAQLAQLKTTLQATQTMSRSLQDKLEVLQGSEMCANAENQKLKKSLEAAESRVSHLEI
SQCTLQGELQRAHLRVAELDAEAGALQERLTDTRKKLCESEDRCAALRVSEEKLTVSLAR
AEQHENVLREQVHTLSNTASLNRKNAEGLQEQVTELQGALTASEADRRLLQEHLDKTRDA
LSESKRLNYSLTKQTQNLNSAQEDSYVRISELEKSNRTLQESLKQQEESQLQASIRIEKE
KKELQEKLSNLQSSLQTLQNEKAKMEKVVTNLSKNKSALRKTLEKVEMERLRKEDEVISV
TREKAKLEETLHSLKKELSEEQRVVQTLQVQLSELERAHAQHLLEVTAHHHRELSAETEH
LREGQLQVELALETREMAHRQRVRCLEEQVLTLKEQLDQETRRRQEYFIQMLQPGV
NT seq
5571 nt
NT seq
+upstream
nt +downstream
nt
atgatgagttctccacaggaacaagctggactctcaccgagactggaggctgtgattcag
aggttggaggagactctgcttcactcagacggcagctcagcagaggttagcctggcactt
caaggcgatgaagaaggatccagagctactctccttcccatctccactcgaatttgtcag
atcatcactcgcaacctaaccgagcagccagctggtgagagcctcgaggttagcaagctg
gagggaagcggtgccctaagggagcattcttctcccagccagaaggacggcgatcagctg
ctggtcaaacaaaccagtctcacagagagggctgacctggactctgctgagcgtcagaag
aatgaggatcaggatcttcacctcactatccagaaacgttctgctcagctgcaggaggag
cgaagccggactgccaggctaagccaagtgaactctttgctgcgggaacaactggaccag
gtcgacactgtcaataagggcctgacagagagcttatggaaggcccgcaaagatgctgag
tgggttgataatcgcctgcgcagagagcaagagacgtacgcctcccggttgaatcgtgag
caggctcgcgtcagggcactgtggcgccaggccgcctccctgcggagcactttcacccac
ctaaagactttcactgacagaactctgtccgatatgcgaggtgagtgtgctgctgtttgt
caactgctgcatgttgcatgtaagagcttagagaccagggaagcagcaaagaaccgttgc
tgtgggtcggaaacatcagtgcttgggatggagctgaaaaagaagctgaaggagaccatg
gagctccaggttctctgggatggagagaaatctgaactcaactcaagaatcttggagctg
actgacaccttgaactgcatccagaaacagaacagtgagagtgacacaagcctcagcacc
aagcaaatcagtctggaggagatggagacgatgagagcagaagatatgacggaggtggtc
cttctccggagagaagtccaaacccttcaaaccattctataccaaattcatgagatggtt
tgcagtgaggatgaaaaatcgaccactgaaaatatgtcagcctcacctctccatgccaag
tttccatcaaagaccggcacccttatagctgtgcagaatgtgctgtccaaacatgataaa
gaatcacaggagattcatggtcgtttgaaggctgctctggagcaagtggatgcatttaaa
gatcagcttcatgagcagaatgcccagagggcaaagttggagcagaagatccaggaaatg
cagagagagcaccaggaggttcagaaagctttggaggaaagcctggaagaaaacagcaga
agtcgctgcacgctggagctcatctctaatgagaaagggagcctggagaagctgctgtct
gggctccagcaggaggtggactcccagcgagctgagctggatgtactgagaagttcgtca
ctggacctccagagacagcgagacctcctgaggcagcagaaggagggcttggaagtgcag
ctgtcacgccagcacacggaagccagcagaggagaaaaggatttacaggaacttggacga
aagtgctctgatctgcggagggaacttataacagtgaaggaatctctggatcaaatcact
ctgcagaaagagatgctggaggatgacaaagctagcctttctttggctctagataagatg
gagcgtcatagcgctgcacgggacactcttctcatcaaactgcagagtcagcatgctacc
ctcagagattccctcattaaaatggctgccctaagtgaaggtttagccaaagacaaagtg
gagctcaaccgcattgtacttcagacagaaggtgagaaaacggagctcagtgaacgtaga
tgtgaagccgaagggaagcgagcagcagccagggaggacgcagcacgggcacaaaaggag
atgatgaacttgctcgctgaaaaacaagcctttgaaagctcccacgttcagctgcaatat
ctctgccagaagctcgaagcagaactgagcctcctgcacagggagagagccgaggccctg
gagaagcaatcagaggtcaagaggcagatgcagactctacaagaggagctgtgtgcatgc
aggaaggagttagatgaaaaaactaccgctgtcaggagagctgctcaagatagggaggag
atcgccaaggacaaggctgctctagaagtgaaactaaactctgctgaccgaaaagcctgt
agcctcaagcaggagctcatagcactgagagcggagaagaactccctggagacagctata
tttgagagccaggagctttctgcatccctggaggccgagctcaccaggttggagggcgaa
agatacagcttgaatctagctaacgaggccttgacgtgtgaggcggctcagatgcgtgta
gatgctgaaaaacagttacaacaagctgcaaaacaacgaggagtgtgggaagaaaaactg
gccgaggtagaaagaaatgccctcttgatgctgaacaagaaagagcaaagtcacagagag
cagctggaagctgaacagaagcgtatggagcagcagtttgcagaattcacggtccaacag
cagcagatcgaagagcagctgcgcacacagtgcgaggagctgcgtgtgcacaaccagagc
tcgatgcagcagatgcaagatgagctggcaaagctgcagaaggagttcagccaaagcctc
ctacaggctgaaagtgacaagcaacaggctttgttccagcaggaagcagagaaagctgcc
cttacagaaaaaatagcatccctacaacaagatctggaaatggagcgaatgcagaaggaa
gccctcagcaaacaacatccagacaagaatgcagtaattatgaaatgtgagctggaagcc
ttacaatcaaagtttgaagaatccctggcatctcatcagagctccaggatgagtctcatg
gagcaaatcagagaactgagccaacaaaaagcaaaagcaaaacaagagttagagggtctt
cgccgtcagctgcaggtgacggaggataatctcctgaaaggacagaaagatctgatggag
gctcacaataagcttcaaggctgtgtggaagaacgagacaagctacgcaaagaggcactg
gaactgaggcgaactctgtccgaagaaaccagagagaaagaggccatcctggtttctaac
caggatctcagagctttcatcaaaagagcagagagagacaataacagcttgaaacgagcg
ttggaggaggaggaacgtaataagtccatcttggaagaatgtaagagctcaacgcacgag
gaagcagccactctaaggagaaccataagggagctggagaagactcatctacaggcacgc
agagagctgcaagagctacgtaggcagataaaggtccttgaaaacaagaataaacaacag
aaccaggaactgctggagctgcaggaccaagtatgtcaggaagagcagaggaaagaggag
gcacggcgggaggcctctgctctcagtcagagaatgctggagtgtgaggctgccaaacag
gcagctctcagtgaggtttcatgtatgcagcgacgtataagggaactggaaacggctgaa
cagcaaagccaaaggctgctgcatgaaaaagaagcctatcagcagcagagtgaccagagc
catagagaaaccacagcccaacttgaggaaatactggaggactataagacccaaatcaaa
gaactttctgtaaagctagttctggcagaaaacagagcccaaagcctggaggagcagcta
aatgtgagcaaagctaaatgttgtcacttggagcaccatctggcagcgctgtatgcggct
ctgcgctgcaccaggctatgtgacacacgggagtccacacaagcatctccctcaaggaga
cacttccaagtgaaaggtggggagtatggaacagaggaatctggaatattctcactcaat
tctgaagatggagacttaaatattaaatctatacaaacatctctacaggagttcatgaaa
gaactcagagatgctcaaagagagagggatgaagcccaggctcagatagtccgtttgaaa
caacatgtgactgaactaaaagcttctcaggagaagtctctcaaccagatgcaggagctg
cagagctccttgaggctttcagaggagggaaaacaggaaatctcaaagcagctgcaaaag
gtacagacttccctggccctgcagcatgatgtaacacagtgtaaagagaaggagagcaga
aacctggaggcccagttggctcagctcaagaccactttgcaagctactcagactatgtcc
aggtcattgcaggacaagttggaggtcttgcagggctcagagatgtgtgcaaatgccgaa
aaccagaagctcaaaaagtctttggaggcagcagaaagcagagtaagccacctggagatt
tctcaatgcaccctccagggtgagctacagagggcccacctcagggtggcagagctggac
gcagaggctggagctcttcaggaaagactcacagataccaggaaaaaactgtgtgagagt
gaagatcgatgtgcagcgctaagggtcagtgaggagaagctgaccgtgtcactggctaga
gctgagcagcatgagaatgtgctgagagagcaggttcacacgctttcaaataccgcaagt
ctgaacaggaagaacgctgaaggtctgcaggagcaagttacagagctgcaaggggctctg
actgctagtgaagcggaccgaaggctgctgcaggagcatttggataaaacacgggatgca
ctttcagagagtaagaggctgaactattcactcaccaagcagacccagaaccttaactca
gctcaggaggattcatatgttagaatttctgagctggagaaaagtaacagaaccctgcag
gagagtctgaagcaacaggaggagagtcagctgcaagcttccatccgaattgagaaagag
aagaaggaactccaggaaaagctcagtaacctgcagagctctttgcaaacccttcagaat
gagaaagctaagatggagaaggtggtgacgaaccttagtaagaacaagtctgctctcaga
aagacactagagaaggtggagatggaaagactcaggaaggaagatgaggtgatatccgtc
acccgggagaaagcaaagctggaggagaccctccacagcctgaagaaagagctgagtgag
gaacagcgagtagttcagactctccaggtccaactgtcagagctggagcgcgctcatgca
cagcacctcctggaggtgacagctcatcatcacagggagctgagtgcagagacggagcat
ctgagggagggtcagctccaggtagagctggccttggagaccagagaaatggcacatcgc
cagagggtcagatgccttgaggaacaggtactgactctgaaagagcagcttgatcaagag
acaagacggcgtcaggaatatttcattcagatgctacaacccggtgtgtag
DBGET
integrated database retrieval system
