Cyprinodon tularosa (White Sands pupfish): 119781870
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Entry
119781870 CDS
T07496
Symbol
prdm1a
Name
(RefSeq) PR domain zinc finger protein 1a
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctul03000
]
119781870 (prdm1a)
Transcription factors [BR:
ctul03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
119781870 (prdm1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
zf-C2H2_jaz
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-met
FOG1-like_PR
zf-C2HE
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
119781870
NCBI-ProteinID:
XP_038138407
LinkDB
All DBs
Position
Unknown
AA seq
844 aa
AA seq
DB search
MCGWDQSYTATSHSSAMLTSEGAHTMEQDDTNHKMASTATSTGSDGAETMTDTDVDMEME
MEEADMTQWTEAEFEEKCTYIVKDTAWEAGPDADVTMTATRAEASLPRNLVLKHLAGTKE
VVGVSSREYIPKGTRFGPLVGEIYTADSVPKDANRKYFWRIFVDGEFHHFVDGLDETRSN
WMRYVNPAKSAAEQNLAACQNGMEIYFYTVKPVPAGAELLVWYCPDFARRLRYPPSGELM
MEKLKQSLMEVKQQQEDREDSSVETSSTSPVSMTPSPPKREHSVLSILRGTNTSSSAPKR
EPSRPLPTRPLCADSPERPLYPLARYPTLRPPFPLPEDMLKPSQLSYPSTHSPGKQSSAT
PSPSARSSPDTSPHSSPSGPALSPASFYPYPGYSPPSAPLPSSFYPPGPQYSRYLLPHHY
PIHGGGVPAVGGIFPRIYPVYSSLLPPHLPLLPSDTAARRLVIPEPVHPSSISANRDYFL
PGPRSAFSTATSLRDKAGAHSSYPGHPNSHGPAHTPSSSSPTAGTAPPSEQVPTKPTSAL
VGNTIERHPDEEAINLTKMKRGAGSAGYKALPYPLKKQNGKIKYECNVCSKTFGQLSNLK
VHLRVHSGERPFKCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLR
LHSGEKPYHCKLCPAKFTQFVHLKLHKRLHSRERPHKCPHCHRHYIHLVSLRLHLKGYCL
AASSGSGSPNVSTQAALEEAHRANDEIERFDISEHAERLEQLQGGVDMDGMLEKQVLGML
WREADLKSPNFHPSYNSTGSELLSASYGAFESPNETSVIKMHHSTPVPTLAAGITVKQES
EERA
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggatgggaccaaagttacacggcgacctctcatagctcggccatgttgaccagt
gagggggcgcacactatggagcaagacgacacaaaccacaagatggcctccacagctacg
agcacgggttcggatggagcagagaccatgaccgacaccgacgtggacatggagatggag
atggaggaggctgacatgacacagtggacggaggccgagtttgaggagaagtgcacatac
atcgtgaaagacacggcgtgggaggcggggccagacgctgacgtcacgatgacagcgacc
agagcagaggcgtcgctgcccagaaacctggtgctcaaacacctggcaggcaccaaagag
gtggtcggggtgagcagcagggagtacatccccaaaggaactcgcttcggtcccctggtg
ggcgagatctacacggccgacagtgtcccaaaagacgccaaccggaagtacttctggagg
atctttgtggatggtgagtttcaccactttgtggacggtctggatgagacgcgctccaac
tggatgcggtacgtgaacccggccaagtcggcagcagaacagaacctggcggcatgccag
aacggcatggagatttatttctacactgtgaagcccgtcccagctggcgctgagctgctc
gtctggtactgtccagactttgcccgccgcctgagatacccaccatcgggcgagctaatg
atggaaaaactcaagcagtcacttatggaagtaaagcagcaacaggaggacagagaggac
agctcagttgaaacatccagtacatctcctgtctcaatgactcccagtccgcccaagagg
gagcacagtgtcctgtccattctgcgtggcaccaacacatcctcctctgcccctaagagg
gagcccagccgccctctccccacacggccactttgtgccgatagcccggagcggcccctg
taccccctcgcccgctacccgacgctcaggcccccttttcccctccctgaagacatgctc
aaacccagccaactcagttacccttcaactcattcccctggcaaacagtcctcagcaaca
ccaagcccctctgcaagaagcagcccagacaccagccctcatagtagcccctctggtcca
gcattatcaccagcttctttttacccataccctggttactcccctccatctgccccactc
ccttcttcattctaccctcctgggccccagtactctcgttaccttctaccccatcattac
cctatacacggaggtggcgtcccggctgtgggagggatatttcctaggatctacccagtc
tacagcagcctattgccccctcatttgcccctcctgccttctgacactgcagcgaggcgc
cttgttatacctgaacctgtgcacccctcctcaatctctgccaacagagactattttctg
cccgggccacgaagtgccttctcaactgcaacttctttgagggacaaagcgggagcccac
agctcttatcctggacaccctaactcacacggaccagctcacactccgtccagcagctcc
ccaactgccggcacagcaccacccagcgagcaggtgccaaccaagcctacctcagccctc
gtgggaaacactattgaacgtcacccagatgaagaggctatcaatctgaccaaaatgaag
cgtggcgcagggtcagcgggctacaaggcgttgccttaccctctgaagaagcagaatggc
aaaattaagtacgagtgcaacgtgtgcagtaagacctttgggcagctgtcaaacctgaag
gttcatcttcgggtgcacagtggagaaaggccattcaaatgtcaaacctgtaacaaaggc
ttcactcaacttgctcatctgcagaaacactacctggttcacactggggagaaaccacat
gaatgccaggtttgtcacaaacgcttcagcagcaccagcaacctgaaaacccacctgcgc
cttcactcaggggaaaagccctatcactgcaaactctgcccagctaagttcacccagttt
gttcacctcaagctgcacaagcgcttacactcccgtgaacgcccccataaatgcccccac
tgccaccgccactacatccacctggttagcctgcgactacacctcaagggttactgcttg
gcggcaagctccggttccggcagtccgaacgtttcgactcaggctgccttggaggaggcg
catcgcgccaatgatgagatcgagcgcttcgatatcagcgagcatgccgagcgactggag
caactgcagggaggtgtggatatggatgggatgttggagaaacaggtcttggggatgctg
tggagggaggctgacctcaagtcccctaatttccatcccagttacaatagcactggcagt
gaacttctgtctgcaagttacggtgcgtttgagtccccgaatgagacgtcagtcatcaaa
atgcaccatagcacccccgtcccaacacttgctgctggcattactgtcaagcaggagtca
gaggaacgtgcgtaa
DBGET
integrated database retrieval system
