Cyprinodon tularosa (White Sands pupfish): 119782282
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Entry
119782282 CDS
T07496
Name
(RefSeq) VPS10 domain-containing receptor SorCS1 isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctul04131
]
119782282
Membrane trafficking [BR:
ctul04131
]
Protein recycling
Others
Others
119782282
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
APC1_3rd
Motif
Other DBs
NCBI-GeneID:
119782282
NCBI-ProteinID:
XP_038139107
LinkDB
All DBs
Position
Unknown
AA seq
1193 aa
AA seq
DB search
MEREVSFCPKWHGALCSGLFFILSCLALVAEADITCRSCQDGYKWRPQELLLRVETSGPA
AGFQGEVWGSGSRTGRVLCEPGSAGCAELSRITDSWSGQPGQGKVGLTSQRFKRDSGGAR
TPAEGAGAAEERRVPRWSREERRAAGARQEDLKLNSSTFALTGDSAHNQAMVHWSGHNSS
VILMLTKLFDFNLNSVTESSLWRSTDYGATYQKLNDKVGAKTILSYLYVSPNNKRKIMLL
TDPEVESSLLISSDEGATYQKYRLNFYILSLLFHPEQEDWILAYSHDQKLYSSVEFGRRW
QLVHEKVAPNRFYWSKMGLDKEPGLIHLETSISEGQALYVTCKLQNCTDANKGKPFPGYI
DPNSLVVQDEYVFVQVSTAGRPVYYVSAKRDVFTPMKLPKYTLPKELHVISTDENRVVAA
VQEWNQNETYNLYVSDTSGVYYSLALENVVSSMGLEGNVMVDLYEVAGIKGMFLANKKTD
NQVKTYITYNRGRDWRLLQAPSRDLRGNSIHCVLPYCSLHLYLHVSANPYTSGNIASRET
APGIIVASGCIGSELTTSNVSVFITSDAGNTWRQIFDEEYAVLYLDQGGALVAIRHTPLP
IRHLWLSFDEGRQWNKYSFTNTPLFVDGVLGEPGEETLIMTIFGHFSHRSEWQLVKIDFR
SIFNRRCTEADYQTWHLHNQGEPCLMGVKRIYRKLKPTSRCVMGKTFSVTMTSAPCDCTE
ADFECDYGYERRTDGKCSPAFWFHPSAMSRSCTTGMTFLNSTGYRKVVSNNCTAGVIAEY
TARRQHCPIQAPKGLHLVTSEGRLTATLGTNVTFLVFLEEGDGARTSITLDFGDGHALTY
SNVSSIEDGIKHIYKSVGIYRVTATGENSLGSETATLFLHVTCQLEHIHLSAPFVAVKNK
EVNLTAVLHPSQVGTVTYIWWIGNNTEQPVITLEGSVACTFPREGINTVTVQVAAGNTIL
QDRKTIAVHEYFRSHLLAFSSNLDDHNPDVAEWRLDVSRVIRKSLIQATGVREDLLLVTV
LPGLPTAAEFFLLPDKQLTEGKPEKSSAHLDQLSELLLNALNQNLVQFTLRPGVQVTVYA
AQLSAAPLVDTSENHSGSAMLMLLSVVVAGLAVFVIYKFKRKIPGLNVYAQMQNDKEPEM
MSPANPSEATPSSQQDLVPSLEILDTEFNSRPIGCMKPHVHVKFSTDLPTYIV
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atggagagggaggtcagcttctgcccaaagtggcacggtgcgctctgctccgggcttttc
ttcatcctgtcctgcttggctctcgtcgccgaggcggacataacctgcaggtcatgtcag
gatgggtataagtggcgtccacaggaattactgctgagggtggaaacaagtggccccgct
gcggggtttcagggggaagtttgggggagcggcagccggaccgggagggtcctctgcgag
cctgggtctgccggatgcgcggagctgagccggattacagacagctggagcggacagcct
gggcaggggaaagttggtttgacttcccagcgcttcaagagggacagtggcggtgctaga
accccggctgagggagcgggcgcggcggaggagcgcagagtgccgcgctggagcagagag
gagcgcagagctgcaggtgcgcggcaggaggacttaaagctcaacagctccacgttcgcc
ctgacaggcgactcggcccacaaccaggccatggtgcactggtccggacacaacagcagc
gtcattctgatgttaaccaaactctttgacttcaacctcaacagtgtgactgagagttca
ttatggaggtcaactgactacggtgcaacataccagaagctgaatgacaaagtgggagca
aagacgatcctcagctatctgtatgtgagccccaacaacaagaggaagattatgctgctg
acggatccggaggtggagagcagccttctgatcagctctgatgaaggagccacataccag
aagtatcggctgaacttctacatcctgagcctgctcttccaccctgaacaggaggactgg
atccttgcatacagccacgaccagaagctttacagctctgtagagtttggaagaaggtgg
cagctggtacacgagaaagtggctccaaatcgtttctattggtccaagatgggtttggac
aaagaaccaggcttaattcacctggaaaccagcatctctgaaggacaggcgctttatgtc
acctgcaagctgcagaactgcacagacgccaacaagggcaaaccgttccccggatacatt
gaccccaattccctggtggtgcaggatgagtatgtgtttgtccaagtgtccactgcaggg
aggccggtctactatgtttctgcaaaacgagacgtctttaccccgatgaagctgccaaag
tacaccctgcccaaggagctgcatgtgatcagcacagatgaaaaccgagtggtggccgcc
gttcaggagtggaaccagaatgaaacctacaacctgtatgtgtctgacacttctggagtc
tactacagtctggctctggagaacgtggtcagcagcatgggcctggagggaaacgtcatg
gtggacctctatgaggtcgctggaataaaagggatgtttcttgccaacaagaagacggat
aaccaagtgaagacgtacatcacctacaaccgtggcagagactggaggttgctgcaggct
ccgagcagagaccttagaggaaacagtatccactgtgtgctgccgtactgctcattacat
ctctatcttcacgtgtctgccaacccctacacatctggaaacatcgccagcagggagact
gcgcctgggatcatcgtcgcctcaggctgcatcggttcagagttgaccaccagcaatgtc
agcgtgttcatcacctctgatgcaggaaacacgtggagacagatctttgatgaggagtat
gctgtgctttatctcgaccaaggtggagccttggtggcaataagacacactccacttccc
atccgacacctgtggttgagttttgacgaaggacggcagtggaacaagtacagcttcacc
aacacgcctctgtttgtggacggagtgctgggcgaaccaggggaggagaccctcatcatg
acgatctttgggcacttcagtcatcgctctgagtggcagctggtaaaaatagatttcagg
tccatcttcaacaggaggtgcaccgaggcggactaccagacgtggcacctacacaaccag
ggtgagccgtgcctcatgggggtgaaaagaatctacaggaagctgaagcccacctccagg
tgcgtcatgggaaagaccttctccgtgacgatgacctcggctccctgtgactgcacagag
gctgactttgagtgtgattatggctacgagagaaggactgatgggaagtgcagccccgcc
ttttggttccatccatcggcgatgtcccggagctgcacaacaggaatgacttttctcaac
agcaccggttacaggaaagtggtgtctaataactgcacagctggagtgattgcagagtac
acggccaggcgacagcactgtcccatccaggctccaaaaggtctccacctggtcaccagt
gagggcaggctgacagctacactgggcaccaatgtcaccttccttgttttcctcgaggag
ggagacggagcaaggacaagcatcactttggactttggagatggccacgccctgacatac
tccaacgtcagctccatcgaggatggcatcaaacatatttacaaatccgtggggatctac
agggtgacggccactggggagaacagccttggctctgagaccgccacgctctttctgcac
gtcacatgtcagctggagcatatccatctctctgctccctttgtggcggtgaagaacaag
gaagtgaacctgaccgccgttctgcatcccagccaagtgggaacggtcacctacatctgg
tggatcggaaataacacagagcagccagttatcaccctggagggaagtgtggcgtgcaca
ttccccagggaggggatcaatacagtcacggtgcaggtggccgctgggaatacaatcctc
caggacagaaagactatcgctgtccatgaatacttcagatcccatctgctcgccttctca
tccaacctggacgaccacaacccggacgttgccgagtggcggctggatgtaagccgggtc
atcaggaagtctctcatccaggctacaggcgtgcgagaggatctgctcctggtcaccgtc
ctcccaggtttacccacagccgccgagttcttcctcctgcctgacaagcagctcaccgag
ggcaaaccagagaagagctcagctcatttagatcagctctccgagcttctgctgaacgcc
ttaaaccaaaacctggtccagttcacgttgcggccgggagtccaggtcaccgtctacgct
gctcagctgtcggcagcgcccctggtggacaccagcgagaaccacagtggctctgccatg
ctaatgctgctctctgtagtggttgcaggtttagctgtgtttgtcatctacaagtttaaa
aggaagatcccaggcctcaacgtctatgcgcagatgcagaacgacaaagaaccagaaatg
atgagtccagccaatccctcggaggccacgcccagctcacagcaggatttggtgccttct
ctggagattctggacaccgagtttaactcgcggcccatcggatgtatgaaacctcatgta
catgtgaaattctccacagatctccccacatacatcgtctga
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