Cyprinodon tularosa (White Sands pupfish): 119782307
Help
Entry
119782307 CDS
T07496
Symbol
fn1b
Name
(RefSeq) fibronectin 1b isoform X1
KO
K05717
fibronectin 1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04510
Focal adhesion
ctul04512
ECM-receptor interaction
ctul04810
Regulation of actin cytoskeleton
ctul04820
Cytoskeleton in muscle cells
ctul05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119782307 (fn1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119782307 (fn1b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119782307 (fn1b)
04810 Regulation of actin cytoskeleton
119782307 (fn1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
119782307 (fn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctul04131
]
119782307 (fn1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ctul04147
]
119782307 (fn1b)
00536 Glycosaminoglycan binding proteins [BR:
ctul00536
]
119782307 (fn1b)
04990 Domain-containing proteins not elsewhere classified [BR:
ctul04990
]
119782307 (fn1b)
Membrane trafficking [BR:
ctul04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
119782307 (fn1b)
Exosome [BR:
ctul04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
119782307 (fn1b)
Glycosaminoglycan binding proteins [BR:
ctul00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119782307 (fn1b)
Domain-containing proteins not elsewhere classified [BR:
ctul04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
119782307 (fn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
fn1
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
fn2
NDNF
Fn3_Dep-1_2nd
Interfer-bind
FN3_Tor_3rd
fn3_2
DUF4945
Motif
Other DBs
NCBI-GeneID:
119782307
NCBI-ProteinID:
XP_038139141
LinkDB
All DBs
Position
Unknown
AA seq
2448 aa
AA seq
DB search
MTGGPLTGLLVALCVSSAVHCAPKKEKRQTGQYQVYPDLRDAAALTPARCEDNGQSYRLN
QQWEKPYLGSILVCTCKEAAGVECKTKPDAQETCYDKDNARTYRVGDSYERPKDGLMWDC
TCIGSGKISCTIAYRCHDSGRSYRIGETWQKPHENGEYMLECVCLGNNKGEWTCKPVAER
CYDGYASSSFLVGETWERPYQGWMMLDCTCLGEGNGRISCTSRNRCNDPKTKRSYRIGDT
WTKTDSRGNPMQCMCLGNGRGESSCQAQSVGRGSGDVVTQTLLHHHVPTSVGNCRTNSGH
SYLDGHRWITTQGSKQMLCTCLGNGVSCQEWEVKKQAYGGNSNGQPCVFPFVFMGKTYYS
CTSDGRSDGQLWCSTTSDYERDGQYSFCTEQIAIVVTQGGNSNGALCHFPYLYSGRNYTD
CTTDGRRDGMRWCGTTYNYDADQRFGFCPMAAHEEVCTTNDGVMHRVGDKWDKRHDTLGH
MLECTCLGNGRGEWNCIPHSQLRDNCIVDGLTYEVNQQFSKRHDEGHMMNCTCFGQGRGY
WKCDAIDQCKDPQSNTIYQIGEQWDKLISGYHYRCTCYGNGRREMGCEPLQSYPGGSRPV
QVRITEAGNHPDSHPIQWNVPSSTHIAGYILKWRLKNSQKPWNEVNIPGHLTSYTISGLR
PGVTYEGQLISILHFGQQEVTRFDFTTASDSLQTWEGETTQPPPVVDMSESITEITSNSF
VVSWTSASSTISGFKLEYELIEDGAKPKYLDIPRTTTSVTLTDLEPGRRYNVSVYEVPEG
NREPNLILTTSQTTAPDAPTLHPVNDVTETSIRISWSRPQAPITGYRLVYIPSEEGSSTE
LILPDSETSVTLEDLSPGVLYNISIYAVEDNLESEPVFVRVNTAGSPRREKVQAPTDLQF
SEVADTRISLTWEGPPTEVTGYRVVFSPMGQDGTELQRLQVPLFPNAYIEINHLQPGTLY
RFYVYAIRGDTESEPLVGEKSTKPDAPTDLRFTDIGHDSALVIWEAPRAVVTGFRLLLSI
DGSSPVEKRIPGSVTQYLLKNLRPDTQYTAELFSEQNAVLSEGITKYFTTAPRMGNAPPF
STEVTDTSIIIAWIPVRRFSYKLSVLPSEEGESPREETSDSGRIDISGLIPGNQYTYSVQ
PIFNGRNRGNPITRNVVTTLSPPTDLRVVSNPDTGGLTVYWVASRRQGISGYRVTSTPTS
GQRGNFLEEVVSPDKNTCLLENLNMGVEYNVSVFTVKGEVESVPASTIVTPENPTPTHID
FVDITDTTIGLRWIPLNITNIVAYRIMVVASGESLPIFEDMVEASAGYYTIQGLEPGVDY
DISIIAVTKRGESKPTTYTKQTQAAVPAPTNLQFGSAGPDYIRVTWTIPNIATPSEISRF
VIRYHPVDTDNDIKEVNVGGATNTYLLQNLQPNTEYRVIVVCVYGERESEPATGTQKTTL
DSPTDLQFTNIRTNSFTVHWQAPKSPITGYRIHYQKTSGGRAKDERLPPTRNHFTLTGLE
PEAEYMIYVYAVSDNKESQPLTGTQATFSDAPTDLQVTSSTPTSITIRWDAPSIEVKNYR
ITYRGTSGEYPQEITIPGTETHATITGLQPGTEYTITVYAVTGRGDSPASNRPVYITHKT
DTEAPNNMRITDVTDNGIKVRWSPAQGSVRGYRVTVVPKNGFGPSYSEVVAPQTTEKTFN
GLNPTVEYVVSVYALGSDGQPSPPVVENTRTAVDGPKGLTFSDISDNTMRITWESPGGTV
TSYRVLYSSSEEGERELRPAPRADQDSAVLRGLRPGTEYTIKVIAFNGRTPSTPLMGTQE
TAIPTPTNMEVSEVGPSFFTVSWQAPNAGLTGYRVVIRPKNINTPQKEMTLNPDTTRVVV
PGLMVATTYQIQVYALKNAVTSRPLEGEATTLEEVSAPRRVRISDVTDTSFTLTWRTKME
TITGFLLEATPMSGSRDTITRTIPGDRTSYTFTGLQPGTTYFINMYALNGNTRSPKYSLR
AETAMPAVQAPTDLQFTSLTPNTISFTWQPPPTQITGYYVTYEENGRAPKELIPQPHAGQ
NYATIVGLRPATEYIIKIIAMQNTQQSQPLVGRIRTQPDSLLPQPLPQPYGPGVLGNLDV
PEIDDNRVHLTGPDQDVVGGQSQHIEYTEFNNGGNPQSPNEQYREPLVFVPLPDAEGRRK
PVLKLTFPIGASLFNKTGFPEEAQTETSISWKPYRQSNAYLLSCNPLTNRNEMFQVRLPG
TATTATLIGLTPGEDYNVLVEALLGALKHKVLEQVITPGNKVSTGVPSTREDPCYDSFTA
TYHDIGGEWERMSETGFKLWCRCLGGGHFRCDSSKWCHDNGVNYRIGEQWDRQSENGQLM
SCTCLGNSKGEFKCEPHSSMCYDEGKSYQVGNQWQREYLGAICTCTCYGGQKGWRCENCR
KPVSDVDTRLFQSVGYGENTLRKNIHCPIECLRPELLADGIAPQNSQK
NT seq
7347 nt
NT seq
+upstream
nt +downstream
nt
atgactggtggcccactgacagggttgctggttgctttgtgcgtcagcagcgcagtccac
tgcgccccgaagaaggagaaaagacaaacgggtcagtatcaggtgtatcccgacttgcgt
gacgcagctgctcttactccagcccgttgtgaggacaatggtcaatcctacaggctaaac
caacagtgggagaaaccctaccttggaagtatattggtttgcacctgcaaagaagcagca
ggcgttgagtgtaaaacaaagccagatgcacaagagacctgttatgataaggacaatgcc
cggacataccgagttggagacagctacgagagaccaaaggacgggttgatgtgggactgc
acctgcattggctctggcaaaatcagctgcactattgcatatcgttgccatgatagtggg
aggtcttatagaattggagaaacttggcagaagcctcatgagaatggcgaatatatgcta
gagtgtgtttgccttggcaacaacaagggagaatggacgtgcaaacctgttgctgaaaga
tgctacgatggctatgcttcttcatctttcctggtcggagagacctgggagaggccatac
caaggctggatgatgctggactgcacctgcttaggagaaggaaatggacgtatcagctgt
acctcaagaaatcgttgcaacgaccctaagaccaagaggtcctatcgcattggagacacc
tggacaaagactgacagcagaggaaaccccatgcagtgcatgtgtttaggaaacgggagg
ggagaatcaagttgccaagcacaaagtgtaggccgaggcagtggtgatgttgttacccag
actctcctgcatcatcatgtaccaacctctgtgggaaattgccgcacaaactctggtcac
tcatacctggatggacatcgctggatcacgacccagggaagcaaacagatgttgtgtaca
tgtctgggcaatggagtcagctgtcaggagtgggaggtgaagaaacaggcatatggcggt
aattctaatggacagccatgtgtcttcccgtttgtcttcatgggaaagacgtactactct
tgcacgtcagatggacgctctgatgggcagctgtggtgttccacaacatcagattatgag
agagatgggcagtattcattctgtacagaacaaattgctattgtagtcacacaaggtggg
aactccaatggtgccctctgccactttccgtacctgtacagtggtcgaaactacacagac
tgcaccacagatggtcgccgagatggaatgaggtggtgcggtaccacctacaactatgat
gcggaccagcgttttggattttgccccatggctgcccatgaggaggtatgcaccaccaat
gatggagtgatgcaccgtgttggagacaagtgggacaaacgccatgataccctgggtcac
atgttggaatgcacttgcctcggaaatggccgcggggagtggaactgcattccccattca
cagctgcgagataactgcattgttgatggcttgacctatgaggtcaaccagcagttctct
aagcgccatgacgaggggcacatgatgaattgcacctgctttggacagggacgtggttac
tggaagtgcgatgctatagatcagtgtaaggatccacaaagcaacaccatctatcagatc
ggagagcagtgggacaaattaatcagtggctaccactacagatgcacttgctatggtaat
ggaagaagagaaatgggttgtgaacctctgcagtcctacccaggtggttctagacccgtc
caggtccgtataacagaagcagggaaccatccagactcccaccccattcagtggaatgtt
ccatcgtctacgcacattgctggatacatcctaaaatggagacttaaaaacagtcaaaaa
ccttggaacgaggtcaacattcccggccacctcacctcctacaccatcagtgggctgcgt
ccaggtgtgacctacgagggtcaactcatcagcattttgcactttggacagcaagaggtc
acacgctttgatttcacaactgcctctgactccttgcagacatgggaaggagagaccacc
cagcctccgccggtggtggacatgtctgagtcaataacagagatcacctccaacagcttt
gtggtatcatggacctcggcttcttctaccatctctggcttcaagttagagtatgagctc
attgaggacggggctaaaccaaagtaccttgatattccccgcaccaccacgtctgtcacc
ctcaccgatcttgagcctggtcgtagatataacgtcagtgtgtatgaggtgcctgaagga
aacagagagccaaacctcatcctgaccacctcacagaccactgctcctgatgcccccact
ctgcatcctgtgaatgacgtcacagaaacttccatccgcatcagctggagcagaccccag
gctcctattactggttaccgtttagtttacattccatcagaggaaggcagcagcaccgag
ctcatcctccctgactcagagacttcagtaacgctggaggacctcagccctggtgtcctc
tacaacatcagcatctatgctgtggaggataacctggagagtgagcctgtttttgtccgg
gttaacactgccggatctccaagacgagagaaggtccaagctccgactgacctacagttc
agtgaggttgcagacaccaggatcagtctcacttgggaaggtccgcccactgaggtcacc
ggttacagggtggtcttctcaccgatgggccaggatggcactgagctgcagcgccttcag
gtgccgcttttccccaacgcatacatcgaaatcaaccacctgcagcccggcacattgtat
cgcttctacgtgtatgccatcagaggtgatactgagagcgagcctcttgtgggagaaaaa
tcgaccaaacctgatgctcccacagatttacgtttcaccgacattggacacgatagcgca
ttggtcatctgggaggctccccgtgccgtcgttactggctttcgcctcctgctgagcatc
gatggttccagccctgttgagaagaggatcccaggaagtgtcacgcagtaccttttgaag
aatctgcgcccggacacacaatacacagcagagctgttctctgagcagaacgctgtgctc
agcgagggcatcactaaatatttcactacagctcctagaatgggaaatgctcctcctttt
agcacagaggtcacagacacctccatcattatcgcctggatacctgtccgcagattcagc
tacaagctttctgttctcccgagtgaggaaggcgagtctcctagagaggagacctctgac
tctgggcgtattgacatcagcggtctgatcccaggaaatcagtacacctacagtgttcag
cccattttcaatggacgtaaccgtggaaaccccatcacccgcaacgttgtcactactttg
tctcctccaaccgatctcagagtagtgtccaacccagacacaggaggtttaaccgtctac
tgggtagcctccaggagacaagggatctccggctacagagtgacaagcacgcccaccagt
ggacaaagagggaactttttagaagaggttgtcagtccagacaagaatacctgccttcta
gaaaacctcaatatgggtgtggagtacaacgtcagtgtgttcacagtcaagggagaagtg
gagagcgtaccggcgtccaccattgttaccccagaaaaccccaccccaactcatattgac
tttgtggacattactgacaccaccattggcctccgctggatccctctaaacattaccaac
atcgtagcttaccgaataatggtagtagcctcaggcgagagcttgcccatctttgaagat
atggtggaggcatctgcaggttattacacgattcaaggtttggagcccggcgtggactat
gacatcagtattatcgctgttacaaagaggggcgagagcaagccgaccacatacacaaag
caaacacaagctgctgtgccagctccaacaaacttacagtttggaagtgcgggtcccgac
tacatccgtgtcacatggaccatccccaacatcgccactcccagtgaaatatctcgcttc
gtaattcgctaccaccccgtggacactgacaatgatatcaaggaagttaatgttggtggt
gccaccaatacctacttgttgcaaaacctgcagcccaacacagagtatcgtgtcattgtt
gtctgcgtctacggtgaacgggaaagtgaacctgctacagggactcagaaaacaactctg
gactcgcccactgatctgcagtttaccaacattcggaccaactccttcactgttcactgg
caggctccaaaatcccctatcactggttacagaatccactaccaaaagacaagcggtgga
cgagccaaggatgagcggctccccccaaccagaaaccatttcactcttaccggactcgaa
cctgaggccgagtacatgatttatgtgtatgctgtcagcgacaataaggagagccagcct
ctgactggaacacaagctaccttctcagatgcacctacagaccttcaggtaacgtcttct
acacctaccagcatcaccatccgctgggatgccccctctattgaagtaaagaactacagg
atcacctacagaggcacaagtggtgaatatccccaagagattacaataccaggcaccgag
acccatgccaccatcactggactgcagcctggcaccgaatacaccatcacagtttatgct
gttactggacgaggggacagccccgcctccaacagaccggtctacataacacacaagact
gatactgaggcccccaacaatatgaggatcacagatgtaaccgacaatggcattaaagtg
cgctggtctcccgctcagggctcagtcagaggctacagggtcactgttgtccctaagaat
ggttttggaccttcctactctgaagtagtggctccccaaacaacagaaaagacattcaat
ggtctcaaccccactgttgagtatgtcgttagtgtttatgccttgggcagtgatggacaa
ccctctccccctgtggtggagaatactaggactgctgtggacggtcccaagggtctaaca
ttctctgacatcagcgacaacactatgcgcatcacatgggaaagccctggtggcacggta
acatcttaccgcgtcctgtactccagttcagaggagggtgagagagaactgcgtcccgcc
cccagagctgaccaggacagcgctgtactgagaggtctacgtccagggactgagtacacc
ataaaagtcatcgcttttaatggccggactcccagcacaccgttaatgggaacccaagag
acagcaatccccacaccaaccaacatggaggtctcagaggtgggcccatctttcttcacg
gtttcatggcaggctccaaatgctggcttgaccggctatcgagtggtcatccgtcccaag
aacattaacaccccccaaaaagaaatgaccctgaacccagataccacccgtgtagttgta
ccagggcttatggttgcaacgacctatcagatacaagtctatgccttgaagaacgctgtc
acaagcagaccattagaaggagaagcaaccacactggaagaggttagtgctcctcgccgt
gtacgcatctctgatgtgacagatacctctttcactctgacgtggcgcacgaagatggag
acaatcactggcttcctccttgaagctacgcccatgagtggttctcgtgacaccatcaca
aggaccatccctggagacagaaccagctacacttttactggtctgcagccaggaactact
tacttcatcaacatgtacgcactgaatggaaacacaagaagccctaagtattctctcagg
gccgaaacagctatgcctgcagttcaggctcccaccgacctccagtttacatctttaacc
cccaacaccatctccttcacctggcagccacctcccacacaaatcacaggttactacgtc
acctacgaagagaatggaagagccccaaaggagctcatcccacaacctcatgctggccaa
aattacgccaccatagttggtctgaggccagccacagagtacatcatcaagatcatcgcc
atgcaaaacacgcagcaaagccaacctttagtgggaaggattaggactcagccagactcg
ctgcttccccagcctctgccgcagccctacggccccggggttcttggcaatctggatgtg
cctgaaattgatgacaacagagtccatttgacaggacccgaccaggatgtggttgggggt
caaagccagcatattgagtacacagagtttaataatggaggcaacccacagtctcccaat
gagcaataccgtgagcccctggtctttgtccccctccctgatgcagagggccgtagaaag
cctgttctgaaactcacatttccaatcggagcctcgctttttaacaagacagggttccct
gaggaagcccagactgaaaccagcatctcctggaagccttacaggcagagcaatgcctac
ctgctgtcctgtaatcccctcaccaatagaaatgagatgttccaggtccggctgccaggc
acagccaccactgccaccctgataggactcaccccaggagaagactacaatgtattggtg
gaggcactgctaggagcactcaagcataaggtcctggagcaggtcatcacccccggcaac
aaagtatcaactggggttccaagtaccagagaagacccatgttacgactccttcaccgcc
acctaccatgacattggtggtgaatgggagcgcatgtcagagactggattcaagctgtgg
tgcaggtgcctgggtggcggccacttcagatgtgattcctccaagtggtgtcatgacaac
ggtgtcaactaccgcattggagaacagtgggaccgtcagtctgagaatggacaactgatg
agctgcacctgcctgggaaacagcaaaggagagttcaaatgtgaaccacattcatctatg
tgctacgatgagggcaaatcttaccaggtgggcaaccagtggcagagggaatacttaggt
gccatttgcacctgtacttgctacgggggacaaaagggatggaggtgtgaaaattgccgc
aaaccagtttctgatgttgataccaggttgtttcagtctgttggatatggagaaaacaca
ctccgaaaaaacatccattgccccattgagtgcctccgacctgagctgctagcggatgga
attgctcctcaaaattctcagaaataa
DBGET
integrated database retrieval system
