Cyprinodon tularosa (White Sands pupfish): 119782478
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Entry
119782478 CDS
T07496
Symbol
chad
Name
(RefSeq) chondroadherin
KO
K06248
chondroadherin
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04510
Focal adhesion
ctul04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119782478 (chad)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119782478 (chad)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ctul00535
]
119782478 (chad)
Proteoglycans [BR:
ctul00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
119782478 (chad)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_14
LRRNT
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
119782478
NCBI-ProteinID:
XP_038139387
LinkDB
All DBs
Position
Unknown
AA seq
383 aa
AA seq
DB search
MRSVTCLLLLGTCILVLGPAVKGVLSQCPEHCHCHGDLQHIICDNVGLKKIPQVSEATRL
MNLQRNNLGSIPTGAFSTSKGLISLHMQHCQLREIESQAFKGLKKLVYLYLSNNKISSIK
SGAFEDLTELTYLYLDGNQITELSKGIFSPLINLFVLQLNDNRLRELRPGTFAGTKDLRW
LHLSGNELTTLHPGSLDDVENLALFHLDNNKLSTYPTAAMSKLRVVEELMLGRNPMKTIP
DNAFQSFGRYMEKLHLDNMGLERFSAGAFNGVKAMTVLHLHNNKLKSLPSAMQLDTITNM
TLFNNSWSCSCQLAPLRKWMDSQQDETDVICASPPSQKGIKVRDSTVFKTCETKEEQKPK
TKTKAKRKDKGQKTRKGKAGRRH
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcgttctgtgacctgcctgctcttgttgggaacctgcatcctagtgttggggcctgcg
gtgaagggagtcctgagccagtgcccggagcattgccactgccatggagacctccaacat
atcatctgtgacaacgtggggctcaagaagatccctcaggtttcagaggccacccgtctg
atgaacctgcaaaggaacaacctgggcagcatacccacaggggccttcagcacaagcaaa
ggactcatttcgctgcacatgcagcattgccagttgcgagagattgaatcccaggcattc
aaaggactgaagaagcttgtctacctctacctgtccaacaacaagataagcagcatcaag
tctggtgcttttgaggatcttaccgagttaacctacctctacctggatggaaaccagatc
actgagctgtctaagggaatattctcccccttaatcaacctctttgttctgcagcttaat
gataacaggctgcgtgaactgcggccaggcacctttgcaggcaccaaggacctgcggtgg
ctgcacctgagtgggaatgagctgacaacactgcatccagggtccctagacgatgtagag
aatctagctctatttcacctagacaacaacaagctgtccacctatcctactgcagccatg
agcaaactgcgagtggtggaggagctcatgctagggaggaaccccatgaagaccatccca
gacaatgcttttcagagttttggacgttacatggagaaactacacctggacaacatgggt
ttggagaggttctctgcaggtgcatttaatggtgtaaaagcaatgacggttcttcacctg
cataacaacaagctcaagtcccttcccagtgctatgcagttagacaccatcaccaacatg
acccttttcaacaacagctggagctgctcatgccagctggctccactgcgcaagtggatg
gactcgcagcaagatgaaacagatgttatttgtgcctcacctccttcacagaaggggata
aaagttagagatagcactgttttcaagacgtgcgagaccaaggaagaacaaaagccaaag
acaaagacaaaggcaaagagaaaagacaaaggacaaaagacaaggaaaggcaaggctggc
cgacgtcattga
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