Cyprinodon tularosa (White Sands pupfish): 119782619
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Entry
119782619 CDS
T07496
Symbol
rc3h2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctul03000
]
119782619 (rc3h2)
04121 Ubiquitin system [BR:
ctul04121
]
119782619 (rc3h2)
Transcription factors [BR:
ctul03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
119782619 (rc3h2)
Ubiquitin system [BR:
ctul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119782619 (rc3h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_2
zf-RING_UBOX
zf-CCCH_4
zf_CCCH_4
zf-CCCH_UNK
Prok-RING_4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
119782619
NCBI-ProteinID:
XP_038139574
LinkDB
All DBs
Position
Unknown
AA seq
1118 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDSSGHQPISLGCSHTVCKTCLHKLHRKACPFDQTPISTD
IDLLPVNCALLQLVGAEVPEVQPVSLSSAADVEHYEICRLCVEELALYLKPISGAKGVAN
LSSSVLSRPMQRKLVTLVNCQLVEEEGRVRVVRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEDALKLVLLALEDGSALSRKVLVLFVVQKLEARFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLVHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPSNLTSLRPHLELLANI
DHNPDAPAPSWAELESVMLAVKFVVHGLVEFVQNFSKKSHETPQPQANSKYKTSMCRDLR
QQGGCPRGTSCTFAHTQDELEKFRLRNKKSGSVVRQFPLANKGIKDTEENMGSTTEVGSS
LTNPLLISRGSGGVEELKRVVTNGTNGTNGPTRTPSGSTELKSLSPPRTPVSLSSASSPL
STPGGADVCTPLPRHGQFILSSPHPSQGSEMYYQEPHPGYDKAHFQQSSGSFYPSTLHPP
HKTCMARFLRSSNVQESALPPSAGVSSYPNDHQPPHPASSPSSGFPPRDQMGAPTFHHHP
GQGQYGHLGPSHGVYAPLYDSRRLWRPQLYHREDARSNSLPPEVLHSSVYQPPLRERFNS
LDSNYCSGAEHRTGLHRDYGRVPLGYEDLFRRKQEHWTHIHHHHRPSQSSPIFTADFGPE
HMENGGGQCMGCRFRGEESLARYSPWSCGTAGPSLSPFEPEPLKPAPAHSHSHSERPELD
CNEGGQGVVSGTGKRWLHSLDHYRRLKEEDPIIPFSEAPIISKWGAISRASRTGYHTTEP
VQATARQGSASTTAINFKDYNHHFDHSDYRWSSRGSDSSSHSSFLESEHLCASELNGRRS
SISSGEKIVSEQLQDNQTSFSREPNQTENESDPDRDIELELRALDMEDSEHHEIKSQEGL
DLPSPQSQDASHLLPPPCSSPLCPSPVEERSKSESLLTEKMDALQLKKMAFRKSLSPIGL
GSGGLGIMKLVLRTGPHQLGDTSTKAHPETPGTEMLLN
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgcaggcagcccagtggacagagttcctgtcctgtcccatctgctacaatgag
ttcgacagcagtggccaccagccaatcagcctgggctgctcccacactgtgtgcaagacg
tgcttgcacaagctgcaccgcaaggcctgccccttcgatcagacccccatcagcacagac
atcgacctgctgccggtcaactgcgccctgctgcagctggttggagcagaggtcccagaa
gttcagcctgtgagcctaagcagtgcagctgatgttgagcactatgagatctgccgattg
tgtgtagaagagctggctctctacttgaaaccgatcagtggtgccaaaggtgtggctaac
ctgagttcgagcgtgctcagcagacccatgcaaaggaagctggtgaccctggtgaactgc
cagctggtggaagaggagggtcgtgtccgcgtggttcgggctgcccgctctctgggggaa
cggactgtaactgagctcatcctgcagcaccagaacccccagcagctctctgccaatctc
tgggcagcagtgagggcacgtggctgtcagtttctgggtcctgcgatgcaagaagatgcg
ctgaagctggttttactggctctggaggacggttctgctctctccaggaaggtgctggtt
ttgtttgtggtccagaagctggaggcccggttcccccaggcgtccaaaacaagcattggc
catgtggtgcaactactctacagggcctcctgttttaaggtgactaagcgtgatgaggac
tcctccctgatgcagctgaaggaggagtttcggacgtatgaggcgcttcggagagaacat
gatgctcagattgtccacattgccatggaggctggccttcgaatctctcctgagcagtgg
tcctctctcttatatggagacctggttcacaaatcacacatgcagtccataattgacaag
ttgcagtctccagaatcatttgcaaagagcgtccaggaactgacgattgttctccagagg
acaggagacccttccaacctaaccagtcttagaccacacctggagctcctggccaacata
gatcacaaccctgatgccccagctccatcatgggcagagctggaaagtgtgatgctggct
gtaaagtttgtggttcacggtctggtggagttcgtccagaactttagcaagaagagccat
gaaactccacagccccaagccaacagtaaatataagacgagcatgtgcagagaccttcgt
caacagggaggatgccccagaggaaccagctgcacatttgcacacacccaggatgaacta
gagaaattcaggctgaggaacaagaagagtggcagtgtggttcgccaatttcctctggcc
aataaaggcatcaaagatacagaggaaaacatgggttctacaacagaagtaggttccagc
ctaacaaacccgctgctgatctccagagggtctggaggtgtggaagaactgaaaagggtt
gttacgaatggaaccaatgggactaacggccctaccagaaccccatcggggtcaacagag
ctgaagtccctgtctccccccagaactccagtcagcctctcgtcagcttcgtctccattg
agcacgcctggtggtgctgatgtctgtactcctctgcctcggcatggccaattcatcctc
tcctcacctcacccctctcaggggtcagagatgtactatcaggagccccaccctggttac
gacaaggcacactttcagcaaagctcaggttcattctatccatctactcttcaccctcca
cacaaaacatgcatggctcgcttcctccggtcctctaacgtccaggaatcggccctgcct
ccttctgcgggtgtttcctcgtacccaaatgaccatcagccacctcacccagcctcatcc
ccttcttcaggatttcctcctagagatcaaatgggagcccccaccttccatcaccatcca
ggacagggacagtatggacatttgggtccttctcacggtgtttatgctcctctctatgac
agcaggagactatggagacctcagctgtaccacagagaggatgccaggagtaactcactg
cctccggaggttctgcactcctcagtctaccagcctccactcagggagagattcaactct
ctagacagcaactactgctctggagcggagcatcgcaccgggctgcacagggactatggg
cgcgttcctctgggatatgaggatctgttcagacggaagcaggaacactggactcacatt
caccaccatcacagaccctcccaatcttcccccatcttcactgctgattttgggccagag
catatggaaaacggtggaggtcagtgcatgggatgtaggttcagaggtgaggaaagtttg
gcacgttattctccatggtcctgcggcacagccgggcccagcttaagcccctttgagcct
gagcccctcaaacccgccccagctcactcccattcccactcggagcgtccggagctagac
tgtaacgaaggaggacaaggcgttgttagcggcactgggaaacgatggctacactcgttg
gatcactatcgacgtttgaaagaagaagatcctattattcccttcagtgaggcgcccatt
atctcaaagtggggggccatctctagggcatcccgcacaggctaccataccaccgaacct
gtacaagccacggcccgccagggcagcgccagcaccacggccataaacttcaaagattac
aaccatcactttgatcacagtgactatagatggagctccagaggatcagactcctctagc
cattccagtttccttgagagtgagcatctttgtgcgtcggagctgaatggccgccggtct
tcgattagcagcggagagaaaattgtgtcggagcagcttcaggataatcagacctccttc
agccgggaaccaaaccaaactgaaaatgagtcagatccggatcgagacatcgagctcgaa
ctgcgggctctggacatggaggattcagaacaccacgagattaagtctcaggaaggttta
gatctgcccagccctcagtctcaggatgcttcccacctcctccctcctccctgctcctct
cctctgtgcccctcccctgtagaggaacgcagcaaatcagaaagccttctgactgagaaa
atggacgctctccagctaaaaaagatggctttcaggaaatctctttctcctattgggctg
ggatcaggaggtctgggcatcatgaagctcgtactacgaactggacctcatcaactgggc
gacacttccaccaaggctcatccagaaacccctgggacagagatgctgcttaattaa
DBGET
integrated database retrieval system
