Cyprinodon tularosa (White Sands pupfish): 119782751
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Entry
119782751 CDS
T07496
Symbol
strc1
Name
(RefSeq) stereocilin
KO
K24636
stereocilin
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ctul03037
]
119782751 (strc1)
Cilium and associated proteins [BR:
ctul03037
]
Other cilia and associated proteins
Stereociliary proteins
119782751 (strc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Stereocilin
Motif
Other DBs
NCBI-GeneID:
119782751
NCBI-ProteinID:
XP_038139794
LinkDB
All DBs
Position
Unknown
AA seq
1958 aa
AA seq
DB search
MWSSPTVRMVCILFGIISDITPVCSQPRLVPGQNNKMTAEDGKLGEDIQKVIDEIHLLSE
QNSRSFAVPSTEDHLNLNTYYSILSNLYRLFQPLMRKGFFDDLPKMLVCLLLERQDCGLE
AELTKTVSLEMGKPFLMFFSSLRSQTCGPMTPDGESRSFFGTYLNVGSTLTSAFSGFQQL
FINMLSNLMLSENLTNVLRSLLDSLSANVLHFLSMFLEIPVDYVRIALEFGIEVPSLDGQ
DTCQQGDLKQLIMWGLKRNVSWSFGVPLVDILLESFLPLDESLNNYPGAGCHSPSSILFQ
RSASPPNKHTDIRYKMSCDHQNLANINDTLCADVLMGLGNASLSLLTFCKALGSLNNSQM
EHVWSNMCYIFQMLTSPLVNKSSNCVVEDTQPSAVSSPLNESQLVPPSAPRRVAREASRL
QQLDCNYSSWLNSTADAALVSFCRDNDNKEFVRQVCNNASLMKKLLLDQANIWLYGFCAN
SSADDVYMVSQFCRYEQWIDQPSYQVGAALLQFCISLDAPRLTSLICEHTGFFMLLNSNP
DNWQLMPNCTNSRPPAPFPNPSLLQLDSCQYSEWHNVMQITTDILSKCILIDQIRFATEV
CANKTFLSNLLQNKDIAWLETHCSTFLVVQPTEPIPTFDLASWCDYHTWGERQVDDSVVG
LCWQNDQAAFQENVCCKIAVFEKLLENPKNKWLTTVCTDMEKITVTPQLCRYTDWTHPII
VDMTELALCAEIDPQNFTSKVCANATVIQNLLANQDNAWLVQYCSNHSSSVSPPVTGGGQ
TTLTGFIVFEQCVYSNWITSLPNATLLAQCWENDQANFVSSICPNPVLLLLLSREPSTAW
VSSMCTTFTNYTNTPTKNGTTTVPNTCASQTLMKQFTLLCPKYLIQDCQPCPSENMILQM
MVRCWVESLSSRMESLLTTPVTEVLNKAVATTVVILLAVEDSMGPIWQVNNTIRQNVLAS
IVDFLKRETNQDKKTVLLQCFGIVLSNLLQSTRDMTSKEQLFIKEYFSLPLSSLRPVLAA
AHISTVRLILQYYNRFKDSLQLSDEYQSTMVSVLLKIHQAKDEKLLLELGSLLAAASPTD
IQALPSMLNINVRETINTNMDRMSLAQREAFGLWYSKVMSASNITGGHLSLIRDTGNLIA
YLPFHSFQHLSAAQLFDGLDVLQRNTLSSLKQEFIADKFIGTYRNLTAQDFIRLGNLSCL
ADPEDLLVYRNTEAFQVIQENILSCALKGLSLPSQMVSDFLLNNPELQTPSSLSANRLKE
LAPLLPLLGVTFLKDLTSSQLISALPALKSVPFTPIQASIIVDKLFLNNTLRQNQLQELG
SLIVGVKTETLLPLTSDRLLSMLKALSQHTPIRCLPHKHALCAPEANAIATKLWGFPEVV
SWLDDVEPLLRCTPLLSILPRTRLLVERLSNTSTKPWNTQQAQAIVKELININPDLIKQD
FLTLQRLGQGLSCKILKYHFQADKSPSSVRKILSFLQKQPTVLHTSLKKCVIEELDTFDF
TDMLQDLGAEIALSIPVSTIKKFSADKMDTLRNMIVTTPQHFLMLSRTKQELLVDKIVQR
MAMNTGPFTEEEFRSLGIMAPFVEDEVFVQLERTFFIQNLEYLKGLCYSSSKTEIVARML
QEPAVFGPVKNWNKATLSAVGRFLFFLPWNILQEISSPLMTVGRIERLFMSHRHWEEGEV
GILCSDMNERKELSQKQQFVLQTYLGFLKINSFSLPQIVPTCEILRTTAPSAWTSSSLGR
MSSSAFSNCLELMGQDPFLQSYQRAEVLSRVKKIYGPISSFSQSLIAQLGGIALELSPEE
LSALHLEERRSIAAMGAISTWNNRQLTTLFTRVLNSTKRTPSQLDSSMLVALGHIVCGAK
TTEIKTFNNVELSKAVLWLGQLRLSCSEEQMLALVELLTNNLAFGPMDSWGTDVFIEIGV
LAAGLPDIAMSALVKEQIEGITPLAISIIPPEKFAFLL
NT seq
5877 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcttcaccaactgttcgtatggtttgcatcctatttgggatcataagtgatatc
acaccggtgtgttcacaacccagattagttccaggacagaacaacaagatgactgctgag
gacggcaagttaggagaggacattcaaaaagtcattgatgaaatccacctcctctctgag
caaaactcacgcagctttgctgtcccctccacagaggaccatctcaacctgaatacatac
tatagcatcctcagtaacctctacaggctttttcaaccactgatgagaaagggttttttt
gatgacctgcctaaaatgctggtttgccttctcttagagagacaggactgtggcctagag
gcagagctaacaaagacagtttcattggagatggggaagccgttccttatgtttttctcc
tcactcagatctcagacctgtggtccaatgacccccgatggagagtcgaggagcttcttt
gggacctacctcaatgttggaagcacactgacatcggcatttagtggttttcagcagctg
ttcattaacatgctgtcaaacctcatgctgtctgagaacttgactaatgttctgcgtagc
cttctagattcactttcagccaatgtgctacatttcctatcaatgttccttgaaatacca
gttgattatgtgagaatagccttagagttcggaattgaagtcccatccctggatggacaa
gacacctgccagcaaggcgatctcaagcagctaattatgtggggactaaagcgcaatgtg
agttggtcttttggcgtcccacttgttgacatcctcctggaatccttcctccccttagat
gaatctttgaacaattatccaggagcaggatgccacagtccttccagcatcctctttcag
cgcagcgcatcaccaccaaacaaacacaccgatatccgctacaagatgtcgtgtgatcat
caaaacctggccaatatcaatgacactctctgtgctgatgtcctcatgggtttaggaaat
gcatctctgtctttgttaaccttttgcaaagccctgggctccctgaacaacagccagatg
gagcatgtgtggagcaacatgtgttatatttttcagatgttgacgtctccactggtcaac
aagtcatctaactgtgttgttgaggacacccagccctctgctgtgtccagccctctgaac
gagtctcagctggtccctccttcagctcctcgccgagttgccagggaggcttcaaggctc
caacagctggactgcaattatagcagctggttgaacagcactgcagatgctgctcttgtg
tctttctgcagagataatgataataaagagtttgtgaggcaggtctgtaacaatgcttca
ctgatgaagaagctgctcttagatcaggcgaacatctggctatatggattctgtgctaac
tcctctgcagatgatgtgtacatggtgagtcagttctgcaggtatgagcagtggattgac
cagccttcttatcaagtgggtgctgccctgctgcagttttgtatcagccttgatgctcca
aggctcaccagtctaatttgtgagcacactggatttttcatgcttctaaactccaaccct
gacaactggcagctgatgcccaactgcacaaattcacgccctccagcaccgttccctaac
cccagtttattacaattggattcctgccaatactcagagtggcacaacgtgatgcagatt
accacagatattttatcaaagtgcatccttattgatcagattagatttgcgactgaggtt
tgcgcgaataaaacctttcttagcaaccttctgcaaaataaggacattgcatggctggaa
acccactgcagcacctttttggttgttcaacccactgaaccaattccaacctttgacctg
gcatcgtggtgcgactatcacacctggggggagaggcaggtggacgattctgttgttggc
ctctgctggcagaacgatcaagctgcttttcaggagaacgtgtgctgcaagatagctgtg
tttgaaaagttgctggaaaaccctaagaacaagtggctcacaacagtctgcactgacatg
gagaaaataaccgtgacaccacagctttgcaggtacactgactggacccatcctatcatc
gtggatatgactgagctggctctctgtgctgagattgacccacagaacttcacttccaaa
gtctgtgctaatgctacagtcatacagaaccttctggccaatcaggataatgcatggctg
gtacagtactgcagcaaccactcaagctcagtgagccctcctgttacaggtggaggacag
accaccctaactggattcatagtctttgagcagtgtgtgtactccaactggatcacatct
cttccaaatgcaacactcctggctcagtgctgggagaacgaccaggccaatttcgtctca
tctatctgccctaaccctgtcctccttttgcttctgtcccgggagccatctacagcctgg
gtgagcagtatgtgtactacctttactaactacaccaacacccccacaaagaacggtacc
acaacagtacccaacacctgtgcatcacagactctaatgaagcagttcaccttattgtgc
ccaaaatacctcatccaagactgtcagccttgtcccagtgagaacatgatcctacaaatg
atggtgcgctgctgggtggagagtctgagctcaaggatggagagtctgctgactacgcct
gtaactgaggtgctaaataaggcagttgctactactgtggtgatcctgctggctgtagag
gactcaatgggtcccatttggcaagtcaacaacaccataagacaaaacgtcctggcgtct
attgttgactttttaaaaagagaaaccaaccaggacaagaagacagtgttgctacaatgc
tttgggatagtactcagcaatttgctgcagtcaacaagagacatgactagcaaggaacag
cttttcatcaaggagtatttcagtttgcctttgagcagcctaaggccagtgttggctgct
gcacatatcagcacagtcaggctgatccttcagtactataacagattcaaggactcccta
cagttatcagatgaataccagtccaccatggtgtcagtgctcctaaagatccaccaggca
aaagatgagaaacttcttcttgagttgggctctctgctggctgcagcaagtccaactgat
atccaggcattgccctccatgctcaacatcaatgtgcgggaaactatcaacacaaacatg
gacagaatgagtctggcccagcgagaggcattcggcttgtggtacagcaaagttatgtcc
gcctctaacatcactggaggtcatctatcgctcatcagggacacaggaaacctgattgct
tacttgcctttccacagtttccaacacctttcagctgctcagctgttcgatggtctggat
gtgttgcagagaaacacgctctcttctctaaagcaggaattcattgccgacaaatttatt
gggacctacaggaacctgacggctcaggactttatccgattgggaaatctgtcatgcctc
gcagatccagaggatctccttgtttacagaaatactgaagcctttcaggtcatccaggag
aacatattgagctgcgcactcaaaggactcagtctgcccagtcaaatggtttcagatttc
ttactcaacaacccagagcttcagaccccgtcctcactcagtgctaaccgactgaaagag
cttgccccactcctgcccttactaggtgtaaccttcttaaaggatctgacatcatctcag
ctgatctctgctcttcctgcacttaaatccgtaccattcacaccaatacaggcatctata
attgtggacaagctgtttttaaacaacacgctgaggcagaaccagctgcaggagcttggc
tcgctcattgttggtgtaaagacagagaccctgctgcccctcacttctgacagactgctg
tccatgttgaaggccctcagccaacacactcccatccgctgcctgccacacaagcatgcc
ctctgcgcaccagaagcaaacgccattgcaaccaaactatggggctttccagaagttgtc
agctggctggatgacgtggagcctttgctcagatgcacgcccctgctgagtatccttccc
agaactcgccttcttgtggaaagactctctaatacatccactaaaccttggaacacacag
caggctcaagcaattgtcaaagagctgattaatattaacccagatctaatcaaacaagat
tttctgactctgcaaagactgggtcagggtctcagctgtaagatcttaaagtaccatttt
caggctgataaatcaccttcttctgtgaggaagattttgagcttccttcagaagcagcct
actgttcttcacacttccctgaaaaagtgtgtgatcgaggagctggacacatttgacttc
accgacatgcttcaggatcttggagctgaaattgctttgtcgataccggtgagcaccatt
aagaagttttctgcagataagatggacactctgaggaacatgattgtcactacacctcaa
cactttctcatgttatccagaacaaaacaggagcttcttgttgacaagattgttcagagg
atggccatgaacaccgggccattcaccgaagaggagtttcgttcactgggcattatggca
ccatttgtggaggatgaagtttttgttcagttggaacgaaccttcttcattcaaaacctg
gaatacctcaaaggactgtgctacagcagcagcaagacggaaatagtggcacgtatgctg
caagaacctgctgtttttgggccagtgaaaaactggaacaaggcaactctcagtgcggtg
ggacggtttctctttttcctgccttggaacattctacaggagatttcatcgccgttgatg
acggtggggcgcatagagaggctgttcatgagccaccgtcattgggaggagggggaagtg
gggatcctctgctcagacatgaacgagaggaaggaactttctcaaaaacagcagtttgtt
ctgcagacttacctgggattcctgaaaataaattctttctcacttcctcaaattgttccg
acctgtgaaatcctgcgtaccacagccccgtctgcctggacttcaagcagccttggcagg
atgtcttcatctgccttctccaactgtctggagctaatggggcaggaccccttccttcaa
tcctatcagcgtgcagaggttctcagcagagtaaaaaagatatatggccctatctcctcc
ttctcccagtctctaattgctcagctgggtggaatagcattagagctgtcaccagaagag
ctgagtgctcttcatctggaagaacgaaggagtattgctgctatgggagccatcagcacc
tggaacaacagacagctgactacactgtttactagagtgttgaactccaccaagcggaca
ccgagtcagcttgactccagcatgctggtggcgctcggacacattgtgtgcggagctaaa
accacagagatcaagacttttaacaatgtggagttaagtaaggcagttctctggctgggg
cagctgaggctgtcctgctcagaggagcagatgcttgctctggttgagctgctcaccaac
aatcttgcttttggacccatggattcatggggcacagatgtgtttattgaaataggagtc
ctggcagctggtcttcctgatattgccatgtcagctctggtgaaagaacaaatcgaaggt
atcacgcccctggctatctccattatacctcctgaaaagtttgctttcttgctttag
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integrated database retrieval system
