Cyprinodon tularosa (White Sands pupfish): 119782784
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Entry
119782784 CDS
T07496
Name
(RefSeq) LIM domain only protein 7-like isoform X1
KO
K06084
F-box protein 20
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
119782784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ctul04121
]
119782784
Ubiquitin system [BR:
ctul04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
119782784
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
PDZ_6
PDZ
LIM
PDZ_2
Motif
Other DBs
NCBI-GeneID:
119782784
NCBI-ProteinID:
XP_038139858
LinkDB
All DBs
Position
Unknown
AA seq
1267 aa
AA seq
DB search
MEWRQQSSVSCEDAFTEAQRWIQEVTGKSFGCSDFRVALENGVLLCDLINQLKPGIIRRV
NRLSTPIAGLDNVTVFLKACGKLGLNESQLFHPGDLQDLSTRVTLRRDESQRRLKNVLIT
IYWLGRKAQLDTLYSGPQLNFKAFEGLLGLALSKALEEGTNAFVKDGSYKECLHSEGEES
LQTRQTYNRGNSLVGFDCVDPKAVCLHEEGFESDAEAEQVYKMDSTKVSAQQSKGHVQPP
LGRKQGRSEKAADHTSQLPRACQIQSETPVQVNPGWIWSKSLSDIPMVYPVRKVSNGNAI
SDKGQDTRDWNQEIERNCSAVARDSEVQWQDDLTRWKNRRRSTKSELYRRSFEREHIFKE
MTNGAVRNYEGNEAPGGPIKRDQSPWRHSSLPRPYSVSPSKPLSFALRPHTEAISTSSYA
TDTPFRPQSYSQECHQGASSKSGGSIIGGEPALASLASDGRAGVTTPSLHQAFTSQTQVK
ALGSQSTFHSSLGQVQPQRCLPNQISSSFNIIQPELFDSEESATTCNSASYMHSFSTDLK
GKTFSPNVVSHSGVDVTDDLIKKSDGIPKSYPNSAEDGRVCRQESARLSKYLSRNATWSS
SASLPRGYRRSEGSTRLSTPITARPFEAKPSGISTLPKQHNVDSLSLIVNTGDSHSSTKP
ALKRQTAAAHLRGQYQASVRQKKANQVRQNAAGQRKEVNDQTFPQTYTKSSSNNKSSVLA
SNASTVLKVDHSDMRVSLTLKPNSVPDFGFQTHWDCTGVRIKSIQPGSPAEHCQLCVDDE
IVAVDGVAVAHMTYSQWKDKMASSLDSGSLTMDIRRHGIKDWSTNKGSNDIQPGHSMLTL
NLTSTAPILIGRSDHHANSPASAEMADTQESQLNGQTDNVTQEKVIGGPFSVNTTKARCK
GGLESAISDIQVPSLNPSSSSWAWDCEEDRRRQEKWQEEQERLLQEQYQRDQEKLEAEWQ
RAQQDAIESETLRENAVEMGSGPELFASSQFYANGLTKGKKEEKVNLDGEYQKEAGLMHP
SIAHRVQSNRIAEKDWAEGSSGFAQLSHAHRAMSMSTPVLSGPCRQSRGLGDPRKRRGLT
MSKAERERQQILEEMKKRTQLLTDNSWIRQRNGGFHKEPADVGTAMKRYESLDNLDIFHQ
SPDCAATFTYPRPSSAAGGYSAQTRTASSRYSTGSLSFQRHVNMESSHQPRMVSGRRTCC
VCERVLGSGAAMIIKTLSLCFHLTCFQCVGCNRHLGGTETGVQVRIHNRRPYCDYCHFQL
KYSALRM
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcggcagcagagcagcgtcagctgcgaggacgccttcacagaggctcagcgc
tggattcaggaggtaactggaaaatcctttggctgcagtgatttccgtgttgccttagaa
aatggtgtgttgctttgcgacttaatcaaccagttaaaacctggaatcatcagacgagta
aacaggctatccactcccattgctggactggataatgtgacagttttccttaaagcctgt
ggaaagctcggattaaacgagtcgcagttgtttcatcctggtgatcttcaggatctgtcc
actcgggtgacactcaggcgtgatgaaagccagaggagactcaagaatgttcttattaca
atctattggctgggtcgcaaggctcaacttgacacactctacagtggtcctcagcttaat
ttcaaggcttttgaggggcttttaggtttggccttgtccaaggctcttgaagagggcact
aatgcatttgtaaaagatgggagttacaaggagtgcttgcactctgagggagaggaaagt
ctgcaaacaagacagacttataatagaggaaactctttagttggctttgactgtgtggac
cccaaagctgtctgtctacatgaagaaggttttgaaagtgacgcagaagcagagcaggtg
tacaagatggacagtacgaaggtctcagcccagcagagcaaaggacatgtccaaccaccg
cttggtagaaaacagggacggtcggaaaaggcagcggatcatacgagccaacttccaaga
gcatgtcagattcagtctgagacaccagttcaggtcaaccctggctggatttggagcaaa
tccctcagtgacatccctatggtgtaccccgtgcgtaaagtttcaaatggaaatgccatt
tctgataaaggccaagacaccagggactggaatcaagaaattgaaagaaactgtagtgct
gttgccagggacagtgaagttcagtggcaggatgatttgacgaggtggaagaatcgacgc
aggagcaccaagtctgaactgtacaggaggtcatttgaaagggagcatatctttaaagag
atgaccaatggggctgtgagaaattatgagggtaatgaagcaccaggagggcctataaag
agagatcagtcaccatggcggcacagctccttaccacgtccttattccgtttctccatcc
aaacctctgagttttgctctcaggccacatacagaagcaatttccaccagcagctatgcc
actgacacccctttcagaccccaaagctattcacaggagtgtcaccagggagccagttct
aaatctggtgggtccatcatcggaggggagcctgcccttgcctccttagcttcagatgga
agagctggagttactacaccttctctacaccaagctttcacctctcagacccaagtgaaa
gccctaggcagccagtctacctttcattccagtctcggacaggtgcaaccacaaagatgt
ttgccaaaccagatctcctcttcttttaacatcatacagcctgaactgtttgactctgaa
gaatccgctacaacctgcaattctgcttcatacatgcattccttcagcactgatctgaaa
gggaaaactttttctccaaatgtagttagtcattcaggagttgatgttactgatgatttg
atcaagaaatctgatggaattccaaaatcatatccaaattcagctgaagatggaagggtc
tgtagacaggagtctgcaaggctttccaagtatttgtccagaaatgcaacatggtccagc
tctgccagtcttcctcgtgggtaccgtcggtctgagggttccactcgtctctccactccg
atcacagccagacccttcgaggcaaagccatccggaatatccacactaccaaaacaacac
aatgttgacagtctgagtttaattgtaaacactggggattcccattcctcaacgaaacca
gctctgaaaaggcagactgcagcagcgcatctgcggggtcagtatcaggcctcggttagg
cagaagaaggctaaccaggtgaggcagaatgccgcaggacagcgaaaggaagtgaatgat
caaaccttccctcagacttatacaaaatcatcttccaacaacaaaagctctgttcttgca
tctaatgcaagtacagtcttaaaggttgatcacagtgacatgagagtgagcctgactctg
aaaccaaacagcgtcccagactttggcttccaaactcactgggactgcacaggggtgaga
ataaaaagcattcaaccaggcagtccagcagagcactgccagctctgtgtggatgatgag
attgtggcagttgatggagttgctgttgcacatatgacctacagtcagtggaaggataaa
atggcatcctccctggattctggcagtttaacaatggacattcggcgtcatggcatcaag
gattggagcacgaataaaggaagtaatgacatccagccaggacacagcatgttgaccctt
aatctgacttctacggcacccattttaataggccgctccgatcaccatgccaacagtcca
gcctctgcagaaatggcagacacacaagaatctcaacttaatgggcagacagacaatgta
acgcaagaaaaagtcatcggtgggcccttctctgttaacacaaccaaggctagatgtaaa
ggaggcttggaatcagcaatatctgatattcaggtgccttccctcaacccatcctcatcc
agctgggcttgggactgtgaggaggatcgtaggcggcaggagaagtggcaggaagagcaa
gagcgccttctgcaggagcagtaccagcgagatcaagagaagttggaggcagagtggcaa
agggcacaacaggatgcaatagaaagcgagacgctgagggagaatgctgttgagatgggc
agtggtcctgagctgtttgccagttcccaattttatgcaaacggactgacaaagggaaaa
aaagaagagaaagtgaatcttgatggagaatatcagaaagaagctggactgatgcatccc
agtattgcccacagagtgcagagtaacaggattgctgagaaagactgggctgagggttcc
agtggtttcgctcagctgtcccatgctcacagggcaatgtccatgtcgactccggtttta
tctggaccctgcagacaatcaagaggtttaggcgatccaaggaaaagaagagggttaacc
atgtcaaaagctgagagggagagacagcagattttggaggagatgaagaagaggactcag
cttctgactgacaacagctggatacgccaacgcaacggtggatttcataaagagccagct
gatgttggcaccgccatgaagagatatgagtctctggacaacctggatattttccatcaa
tccccagactgtgctgcaacatttacttaccctcgccccagttcagctgctggaggttac
agtgctcagactaggactgcctcctcacgctacagcactggctcgttgtctttccagaga
catgtgaacatggagtcctctcatcaacccaggatggtcagtggcaggaggacttgctgt
gtgtgtgagcgtgtcctgggtagtggggctgcgatgatcataaagacccttagtctctgt
ttccacctgacctgtttccagtgtgtgggctgcaatcgacacctcggaggaacagagact
ggagtccaggttcgcatccataacaggaggccctactgtgattactgccatttccaactc
aagtactctgccctccgcatgtga
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