Cyprinodon tularosa (White Sands pupfish): 119782821
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Entry
119782821 CDS
T07496
Symbol
scarf1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119782821 (scarf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctul04131
]
119782821 (scarf1)
Membrane trafficking [BR:
ctul04131
]
Endocytosis
Phagocytosis
Scavenger receptors
119782821 (scarf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_Teneurin
EGF_2
Motif
Other DBs
NCBI-GeneID:
119782821
NCBI-ProteinID:
XP_038139913
LinkDB
All DBs
Position
Unknown
AA seq
896 aa
AA seq
DB search
MRFLRALSVLLCCSLSSAQTLDPGGRNVCKDSRDSSTLLCCTGWRQQGKECTIALCEGEQ
MCLENEICVFPGVCRCPPGYYGAQCKTRCPPEFWASDCRQVCPCYPHGHCNAVTGECTCN
PTRWGPLCQNTCKCTRNGHCHPVMGNCICDEGWWSPTCSKPCQCSSIGSLGSSCDPLTGR
CQCRRGYWGIRCQASCNCNQSPCNERTGVCECEAGSWGSSCDRKCNCDLLHSSCDPVSGQ
CLCQPGYTGVSCNHPCKAGDYGSSCKMRCGHCKDNQPCSSTDGACAACEPGWNGTRCDRP
CASGWYGDGCRHKCPKCWNNEPCDPITGKCLRCDPGRTGARCEELCSDGRYGDGCHFLCS
PCFQGKCHHVTGRCVCSPGFQGDSCNSTCPAMMFGANCSSLCDCGEGVSCNTVTGACPSS
GRGAVLAGVLVPLFLLFVAVLCCCLCCGGGPTDGKNRVAVAEGGLLVRMKYHVYSVLANI
GAALPCMSDWSSGLPRVTVSHHDPELTFNHSFIEPPSSGWVDEGSSFDSDEEEGESLYCV
PPREDIPAVAGGEFQEMSSKCNMFLDPSGFSNEDITSSFNIPRTSSIAKSKRPSVSFAEG
TRFSPKERRGSGQDPGGPSRGKAKTPWGVLMLSALQSQGGTARTGEEDEDEEEQRGDEEG
AQTTDDQQSSREDQEVDSNPSYANLQVPGTSGRRRTMSNTAGLKGTPTPTSDGEVGASHK
LTTVYVTVGKAGRPVTKPESSSEGPVQAMLRRLGSLQRQREQDGGKSKSKPVEGITKPPR
RKLGARAAVWEQGGPSGAQTKPIRQKNVSEAPPSEGNTPKRPLSSILKSVPELAAADCGS
TPRAEGAAVHSVNAGVEQTESSYLTVGPAGEAAEIISNQEAAHYEPCYENVLITQP
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgaggtttctccgagctctgagcgttctgctctgctgctccctgtcctctgcacagaca
ctggatcctggtgggagaaatgtttgcaaggattcaagggactcctctacactgttgtgt
tgcactggatggcgccagcagggaaaagagtgcactatagctctctgtgaaggtgaacaa
atgtgtcttgagaatgagatctgtgtgtttcctggagtatgccgctgcccacctgggtac
tatggagctcagtgtaaaacacgctgtcctcctgagttctgggcgtcagactgccgtcag
gtgtgtccctgctaccctcatggccactgtaatgctgtcaccggcgagtgtacatgcaac
cccacccgctggggcccgctttgccagaacacctgcaagtgcactcgcaatggccactgc
caccccgtcatgggaaactgcatctgcgatgaaggctggtggtccccaacctgctccaaa
ccatgccaatgctccagcattggatctctgggctccagctgtgacccgctaacaggccgc
tgccagtgtcgcaggggatactgggggattagatgtcaggccagttgcaactgtaaccag
tctccatgtaatgagcggaccggcgtgtgcgaatgtgaggcgggctcctggggatccagc
tgtgacaggaaatgtaactgtgacctgctgcacagcagctgtgacccggtgtctgggcag
tgcctctgccaaccaggttatacaggggtttcatgcaaccacccttgtaaagctggggac
tatggcagcagctgtaaaatgagatgtggccactgtaaagacaaccagccatgttcgtcc
actgatggtgcctgtgctgcctgtgaacccggctggaacggcacgcggtgtgaccgcccc
tgcgcctctgggtggtacggtgatggctgcaggcataagtgcccaaagtgctggaataat
gaaccctgtgatccaataacagggaaatgtttgagatgtgaccctggaaggacgggagcc
aggtgtgaggagctctgctctgatgggagatatggagacggctgccacttcctgtgcagt
ccgtgctttcagggcaaatgccatcatgtgacaggaagatgtgtctgtagccctggtttc
caaggagacagctgtaacagtacctgtcccgctatgatgtttggggccaactgctcgtcc
ctctgtgactgtggagagggagtcagctgcaacaccgtcacaggggcctgtccctccagc
ggtagaggggctgtgcttgcaggcgtgctggttcctttgttcctgctgtttgttgctgtg
ctgtgctgctgcctgtgttgtggaggaggtcctactgatggaaaaaacagggtggctgtg
gctgagggtggcctgttggtcaggatgaaatatcacgtctacagtgttctggcaaacatc
ggtgctgccctcccctgtatgtctgactggtcctcaggtctgcctcgagtcactgtttcc
caccatgacccagagctgacctttaaccacagcttcattgagcctccttcatccggctgg
gtcgatgagggttcgtccttcgacagcgatgaagaggagggagagtccctctactgcgtt
cccccgagggaagatatccctgctgtggcaggtggggagttccaggagatgagctccaag
tgtaacatgttcctagacccatctgggtttagcaacgaagacattacgtcgtccttcaac
atccctcggacctccagcatcgccaagtccaagcggccgtctgtgtcgtttgcagaaggg
acacgctttagtcccaaagagaggcgtggatccggtcaggaccccggtggtccttctcgc
ggcaaagctaagaccccctggggggttttgatgctgtcggccctccagagtcagggaggc
acagctaggactggggaggaggatgaagatgaagaagagcagagaggagatgaggaaggg
gctcaaacaacagacgatcagcagtcaagccgtgaggaccaggaagtagacagtaaccca
tcatatgcgaatttacaagtccctggaacatcaggacgaagacggaccatgtccaacaca
gctggtctgaaaggaaccccgaccccaacatctgatggtgaggtgggagcttctcataag
ctgaccacagtatatgtgacggtaggaaaggctgggaggcctgtaacaaaaccagagtca
agctctgaagggcccgtccaggccatgctgcgcagacttggcagcctgcagagacaaaga
gagcaggatggaggaaagtccaagtcaaagcccgtcgaggggatcactaaacctccaagg
aggaagctgggagctcgtgccgcagtgtgggagcagggagggccgtcaggagcacagact
aagccgatcaggcagaagaatgtctcagaggctcctccatcagaaggaaacactcccaaa
cgacctctgtcatcaattctgaaaagcgtcccagagttggccgccgctgactgtgggtca
actccaagagctgaaggagcagccgtgcacagtgtgaatgcaggtgtagaacaaacagag
agcagctatctgacagtgggaccagcaggagaggccgctgagattatcagcaaccaagaa
gcagcacactatgaaccctgctatgaaaacgtcctaattacacaaccataa
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