Cyprinodon tularosa (White Sands pupfish): 119782876
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Entry
119782876 CDS
T07496
Symbol
pkd2l1
Name
(RefSeq) polycystic kidney disease 2-like 1 protein
KO
K04990
polycystin 2L1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ctul03037
]
119782876 (pkd2l1)
04040 Ion channels [BR:
ctul04040
]
119782876 (pkd2l1)
Cilium and associated proteins [BR:
ctul03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
119782876 (pkd2l1)
Ion channels [BR:
ctul04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119782876 (pkd2l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
EF-hand_6
Filament
EF-hand_7
MCM_C
DUF6377
Motif
Other DBs
NCBI-GeneID:
119782876
NCBI-ProteinID:
XP_038139987
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MKCLNNRAESHLTGQVESELDIMANGAWINHGYCGSPQPLPPVINTIYGPQPPFPGFMDS
AYKLDPPGQIQEEPCTAERTKMKKRRGCCSVKGLWSTAWTENTSNNREKFIRTTLRELVV
YLVFLVDVCLLTYGMTSSSTYYFTKAMTDLFVSSASESGVTFQSIGTMEDFWDYAQGPLL
DGLYWTKWYNNQSLNSGNRSFIYYENLLLGVPRMRQIKIKNNSCKVHEDFRNEIIGCFDV
YNDKKEDDLSFGLINGSAWSYHTEKDIDGSSYWGLLTTYSGAGYYQDLSRTKEGSADILA
ELMDNLWLDRGTRAVFIDFSAYNANINLFCVVRLVVEFPASGGTVPSYQIRTVKLIRYIS
TWDYFVLGCELFFCVFILYYIVEEILELRIHKFAYFNSIWNILDIVIILLAIVAIVFNVF
RTVKVDNLLGSLLEQPDIYADFEFLAFWQTQYNNMNAVNLFFAWIKIFKYISFNKTMTQL
STTLGRCAKDILGFAIMFFIVFFAYAQLGYLLFGTEVESFSSFVKCIFTQFRIILGDFDY
DAIDRANRVLGPIYFVTYVFFVFFVLLNMFLAIINDTYSVVKEELVSQKDDLQITDLIKQ
SYMKTFMRLKLKKEKISDVQKALQSGSGEIEFNDFRETLKEMGHGDNEISAAFTKFDRDG
NRVLDADEQTRMKMELEEKRDALNAELNNLGKNYGKEFMEPPASSGDQRSRTFVDQEHFL
RLTSQVLQIETSVAGLTSRMDQIMVKLGLEEKTDTKKLME
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtttgaacaaccgcgctgagagccacctgacggggcaggtggagtccgagctg
gacatcatggccaacggggcctggatcaaccatggctactgtggatcccctcagcctctg
ccccctgtcatcaacaccatctatggtccacagccccccttcccgggcttcatggacagt
gcatacaagctggatcccccgggccagatccaggaggagccatgcaccgctgaacggact
aagatgaagaaaagaagaggctgttgctctgtaaaagggttgtggagcacagcatggacg
gaaaacacctctaacaacagggagaaatttatccgcaccactctgcgggagttagtggtc
tacctggtgttcctggtggatgtttgtctcttgacatacggtatgaccagctccagcacc
tattatttcactaaagccatgacggacttgtttgtgagctcggccagtgaaagtggagtc
acgtttcagtccattggaaccatggaggacttctgggattatgcccagggtcctttatta
gacggcctgtactggaccaaatggtacaataaccagtccctcaacagcggaaaccggtcg
ttcatctactacgagaacctgctgctcggtgttccccggatgaggcagatcaagatcaag
aacaactcctgtaaggtccatgaagactttagaaacgagatcatcggatgctttgatgtc
tacaacgataagaaagaggacgacctcagctttggtcttatcaatggatcagcgtggagc
taccacacagagaaagacatcgacggttcctcctactggggcctcctgactacctacagt
ggagcaggatactaccaggacctgagccggaccaaggaggggagcgccgacatcctggca
gaactgatggacaacctttggctggatcgaggaaccagagcagttttcatcgacttctca
gcctacaatgcaaacatcaacttgttctgtgtcgtcaggttggtggtagagtttccagcg
agcggtggaaccgtcccttcttaccagatcagaaccgtcaaactgatccgctacatctcc
acctgggattactttgtcctcggctgtgagttattcttctgtgttttcatcctctactac
atcgtggaggagatcctagagctccggatacacaagtttgcttatttcaatagcatctgg
aacatcctggatatagtcatcatattgctcgccatcgttgcgattgtcttcaatgttttc
cgaactgtgaaagtggacaatctgctgggttcgctgttagaacagcctgacatatacgct
gattttgaattcctggccttctggcaaacccagtataacaacatgaatgcagtgaacttg
ttcttcgcctggatcaagattttcaaatacatcagtttcaataagaccatgactcagctg
tccactacgctgggtcgatgcgccaaagacatcttgggattcgccatcatgttcttcatc
gtcttctttgcctatgctcagcttgggtatctgctgtttggaacagaagtcgagtctttc
agctcatttgtgaagtgcatattcacacaattccgaatcatccttggagactttgattac
gacgccattgaccgtgcaaacagagtcctcgggcccatttactttgtcacctatgtgttc
ttcgttttctttgtcctactgaacatgtttcttgccatcataaatgacacgtactcagtg
gtcaaagaggaactggtatctcaaaaagatgatctgcagattacagatctcatcaaacag
agctatatgaagactttcatgagactcaaactcaaaaaagagaaaatatcagacgttcag
aaagctctgcagtccggatctggagaaattgaattcaatgacttcagggagactctaaag
gaaatgggtcatggagataatgaaatatctgcagcctttacaaagtttgaccgggacggc
aaccgagttctagatgcagatgaacaaaccaggatgaagatggagctggaagaaaaaagg
gatgcgcttaacgccgagctgaacaaccttggaaagaattatgggaaggagtttatggag
cctcctgcctcgtcaggagatcaaaggagtcggacatttgtggaccaggaacattttctc
aggctgaccagccaggtcctccagattgagacatctgtggcaggtcttacatccagaatg
gatcagatcatggtcaaactgggattagaggaaaaaactgacaccaaaaaactgatggaa
tga
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