Cyprinodon tularosa (White Sands pupfish): 119782937
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Entry
119782937 CDS
T07496
Symbol
spast
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctul04131
]
119782937 (spast)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ctul04812
]
119782937 (spast)
Enzymes [BR:
ctul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
119782937 (spast)
Membrane trafficking [BR:
ctul04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
119782937 (spast)
Cytoskeleton proteins [BR:
ctul04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
119782937 (spast)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
MIT
AAA_22
AAA_5
TIP49
AAA_16
Mg_chelatase
AAA_14
IstB_IS21
nSTAND3
AAA_24
NPHP3_N
AAA_2
DUF815
CCDC53
Motif
Other DBs
NCBI-GeneID:
119782937
NCBI-ProteinID:
XP_038140078
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MSAKTNALKSKDSGELIKNHHKQAFEYISKALKIDEDDAGEKKEAVQWYKKGIAELQRGI
AVEITGTAGDHYDRAKRLRDKMEANLTMAKDRLALLEATLESKSKTPLGSNSNLANPQPK
SKTQPPGSSTTRPSASARPPTRPTEQKATPRMGRDQNGKPPAVKRPPKKDMKNFKNVDSK
LANLILNEIVDRGASVSFEDIAGQDLAKQALQEIVILPSLRPELFTGLRAPARGLLLFGP
PGNGKTMLAKAVAAESNATFFNISAASLTSKWVGEGEKLVRALFAVARELEPSVIFIDEV
DSLLCERREGEHDASRRLKTEFLIEFDGVQSGGDERVLVMGATNRPQELDEAALRRFAKR
VYVSLPDEKTRCTLLKNLLGKHGNPLNDRELSQLGKVTAGYSGSDLTSLAKDAALGPIRE
LGPEHVRNMSASEMRNIKMKDFEESLKRIKPSVSPATLNMYSKWNKDYGDTSAF
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccaaaacaaatgcacttaagagcaaggatagcggtgaactcattaaaaaccac
cacaagcaggcgttcgagtatatatcgaaggccctaaagatcgatgaggatgatgcagga
gaaaagaaggaagctgttcagtggtacaagaagggaatagctgagctgcagagaggaatt
gcggtggagatcacggggacagcaggagatcactatgaccgagcgaagagattacgagat
aaaatggaagccaacctcaccatggctaaagacaggcttgctttgttagaggccacactg
gaatcgaagagcaaaactcctcttggttcgaactcaaatctggccaatccacagccaaag
tctaaaacacagcctcctgggtcctccaccaccaggccttctgcttctgccagaccccca
acaagacccactgaacaaaaggcgacccctcggatggggagagatcagaatggaaagcct
cctgctgtgaaacggcctccaaagaaagatatgaaaaacttcaagaatgtagacagtaaa
ctggccaacttaattctgaatgaaatagttgacaggggagcttctgtatcctttgaagat
atcgccggacaggatttggcgaagcaagcactccaagaaattgtcatccttccctcttta
agacccgagctgtttactggactgagggcgcctgcacgtggtttgcttttatttggccca
cctggaaatgggaaaaccatgctggccaaagcagtcgctgcagagtctaatgccacattc
tttaacattagtgctgctagtctgacttctaaatgggtgggagaaggtgagaagctagtc
agagccttatttgctgttgcaagagaactggagccttccgtcatctttattgatgaggtg
gacagcttgctctgtgagaggagggagggggaacatgatgcctcccgtcgtttaaaaaca
gagtttctcatcgagtttgacggggtgcagtcaggcggagatgagagggttcttgtgatg
ggagcaactaacagacctcaggagcttgatgaagcagccttaaggcgctttgcaaaaagg
gtttatgtgtcgttgcctgatgaaaagacacgatgcaccttgcttaaaaaccttctagga
aaacatgggaatccgctaaacgatagggaactttcccagcttggaaaagtgacagcagga
tattcaggaagcgacctgacatcattagccaaagacgcagcacttggacccattagagag
ttgggacctgaacacgtccgcaacatgtctgctagtgagatgcgcaacatcaagatgaaa
gactttgaagaatcgctgaagcgcatcaagccctctgttagtccagcaaccttgaatatg
tacagcaagtggaacaaagattatggcgacacatcggctttttga
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integrated database retrieval system
