Cyprinodon tularosa (White Sands pupfish): 119783013
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Entry
119783013 CDS
T07496
Symbol
u2af2a
Name
(RefSeq) U2 small nuclear RNA auxiliary factor 2a isoform X1
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119783013 (u2af2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ctul03041
]
119783013 (u2af2a)
Spliceosome [BR:
ctul03041
]
Complex A
U2 snRNP components
U2 related factors
119783013 (u2af2a)
Complex B
119783013 (u2af2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Transformer
Motif
Other DBs
NCBI-GeneID:
119783013
NCBI-ProteinID:
XP_038140198
LinkDB
All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
MSDYDEFERQLSENKQAERDKENRHHRRSSSRSRSRERKRRSRDRDRRSRDRRGDSKERR
HRRSSPSSYPQDKAGSRSPHREKKKKVKKYWDVPPPGFEHITPMQYKAMQAAGQIPATAL
LPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLGGLTQA
PGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSEN
PSVYVPGTQTINGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSA
TGLSKGYAFCEYVDVNLNDQAIAGLNGMQLGDKKLLVQRASVGSKNATLTTINQTPVTLQ
VPGLNSSVTQMGGLPTEVLCLMNMVAPEELLDDEEYEEIVEDVREECSKYGQVKSIEIPR
PVDGLEVPGTGKIFVEFTSVFDSQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDFW
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactacgacgagttcgagagacaactgtctgaaaacaaacaagctgaaagggac
aaagagaaccgccaccaccgccgctcctcgtcccgcagccgcagcagagagaggaaaagg
aggagcagagacagggacagacgcagcagggaccgccgtggagacagtaaggagcggaga
cacaggcgcagctcaccatccagctaccctcaggacaaagctggaagccgttctccccat
cgtgagaagaagaagaaggtgaagaagtactgggatgtccctccacctggttttgaacat
attactcccatgcagtacaaagccatgcaagccgccgggcaaatcccagccacagccctc
ctgcctaccatgaccccagatggcctggctgttactcccacccctgtccccgtggtgggc
agtcagatgacccgtcaagctcgccgtctctatgtgggcaacatcccatttggcattaca
gaggagtctatgatggacttttttaatgcccagatgcgtttggggggtctcactcaggcc
cctggaaatcctgtccttgctgtacagatcaaccaggataagaactttgccttcctggag
ttccgttcagtggatgaaacaacgcaggcgatggcctttgatggcatcatctttcaaggc
cagagtctcaaaatccgtcgtccccatgattaccagcccctgcctggcatgagcgagaac
cccagtgtctatgtgccgggtacacagacaattaatggtgtggtgtccacagtggtgcca
gattcggctcacaagctcttcatagggggtttgccgaactacctgaatgatgaccaggtg
aaggagctgttgacatcatttggccctctgaaggctttcaacctggtgaaagacagtgcc
acaggactatctaaaggatatgctttctgtgaatatgttgatgtcaacttgaatgatcag
gctattgctggactcaacggcatgcagttgggtgacaagaagctcctggtgcaaagagcc
agcgtgggatccaaaaacgccactctgacaaccataaaccagacacctgtgacgctgcag
gtaccaggcttaaacagctctgtcactcagatgggcggcctgcccactgaagttctctgt
ctgatgaacatggtggccccggaggagctcctggatgatgaagaatatgaggagattgtg
gaggacgtcagggaagagtgtagcaagtatggccaagtaaagagcatcgaaataccccga
ccagtggacggcttggaggtgcctgggactggcaagatctttgtggagtttacttcagtt
tttgattcccagaaagctatgcaggggctgactggaagaaagtttgccaacagggtggtc
gtgacaaaatactgcgatccagatgcttatcaccgccgggacttctggtag
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