Cyprinodon tularosa (White Sands pupfish): 119783041
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Entry
119783041 CDS
T07496
Symbol
cnot3a
Name
(RefSeq) CCR4-NOT transcription complex subunit 3a isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119783041 (cnot3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctul03019
]
119783041 (cnot3a)
Messenger RNA biogenesis [BR:
ctul03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119783041 (cnot3a)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
119783041 (cnot3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
119783041
NCBI-ProteinID:
XP_038140253
LinkDB
All DBs
Position
Unknown
AA seq
897 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQRE
KEETGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDKQDRIDELKRLIERHRYHI
RMLETILRMLDNDSVPVDAIQKIKDDVEYYIDSCQDPDFEENEFLYDDLDLEDIPPALVA
TSPSGNVEDDMYLHSSSTPTSTTSSSPIPPSPATCTAENSEDDKKRGRSTDSHVSQSPVK
NGTPSLQSSFSSSVTSGSSSSSSLSMASVVGGVPVVPTSSSLIGSFSSAVQQHQHQSAQQ
QHQSQPSNQSQQQQQPPQTKPSVPSNNAPSPPSNQALPASTAPSLSTPSTPSSTAPNSGS
TPSSSLGLGSDLRKSGMSGTSNANQMPSLGLAGHTTPLNTMAGLITSSTSALYAHAAASG
GLGLSNTTQSSVLPESSNSISNSSSSGITTNGAGSGLSLLGSSSAHISLGNSILGLVPGQ
SVAPAASQGPPSSANSTPGAVGLMVGNSGNAGVAGVNAAPARPPSGLKQNGSPSYSAVVA
ESSTESALSTPSQSQSSQASSLSSSTSQPMDNGPSLISSITLPPSSPSPSFSDSTPGGGS
LLNGPHSFPQASEGLKAPEPLSSLKAMAERAALGSGIEGEISNLHVSNRGLNDIFSVSSA
APGTPAAPQPSVSEVSIPPSLGVCPLGPTPLSKDHLYQQAMQESAWTHMPHPSDSERIRQ
YLMRNPCPTLPYHHQVPPHHSDTIEFYQRLSTETLFFIFYYLEGTKAQYLSAKALKKQSW
RFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaaagaaaactacaaggtgaaattgacagatgtttgaaaaaagtagcggaa
ggtgttgaacagtttgaggacatctggcaaaaactccacaatgcagctaatgcgaatcag
aaggaaaaatacgaagctgatctcaagaaagagattaaaaaacttcagcgattgagagat
caaataaaaacatgggtggcctccaacgagatcaaagacaaacggcagctagtagagaac
cgaaaactaatagaaacgcaaatggaacggttcaaagtggtggaacgtgaaacgaaaaca
aaagcctactctaaagaaggcttagggcttgctcagaaggtggatccagctcagagggaa
aaggaagaaacgggacagtggctaacgaatacaatagatacactaaatatgcaggtggat
cagtttgagagcgaggtggaatctctttcagtccagacgcggaagaagaagggcgataaa
gacaagcaagatcgtatcgatgaactcaagcggttgattgagagacatagataccatatt
cgcatgttggagacaattctacggatgctggacaatgactctgtaccggtggacgctatc
cagaagatcaaggatgacgttgaatactacattgattcctgtcaagacccggactttgag
gagaacgagttcctgtatgatgacctagacctggaagacatccctccggcacttgttgcc
acttctccatcaggcaatgtggaagatgacatgtaccttcactctagcagcactcccacc
tctactacatcttcttcgcccatccctccgtctccggctacttgcactgctgagaactca
gaggacgataagaaaaggggacggtcgacagacagtcacgttagtcagtcgcctgtgaag
aacggtaccccttccttgcaatcttctttctcttcttccgtcacctccgggtcctcttct
tcctcctccctgtctatggcaagtgttgttggaggtgttcctgtggttcccaccagcagc
agtctcataggaagtttcagcagtgcggtacagcagcatcagcatcaatctgcacagcag
cagcaccagtctcagccatcaaatcagtcgcagcagcaacagcagccacctcaaacgaaa
ccttcggtcccctcaaacaatgcccccagtccacctagcaaccaagctctcccagcatcc
accgccccctccctgtccacacccagcacacccagttcaacagctcccaactctgggtct
accccatcatccagtcttgggctcgggtcggatttaaggaaaagcggcatgagcgggacc
agcaatgctaaccagatgccaagcttaggcttggcaggccacaccactccgttaaacaca
atggcaggcctaattacaagttccacgtctgccctttacgcgcacgcagcagcatctggt
ggacttggtctgagcaacaccactcagtccagcgttttgcctgagagcagcaattccatc
tccaattcaagctccagtggaatcaccaccaacggagccgggtctgggctcagcttgcta
ggctctagctcagcccacatctctctgggtaacagcatattgggtctggtccctgggcaa
agcgtggcccccgctgcatcacaggggcccccgagttctgccaactccacccccggagca
gttggcctgatggtcggaaacagcgggaacgccggtgtggctggagtgaacgctgctcct
gccagacctccgagtggattaaagcagaatggaagcccaagttacagtgctgtagtggca
gagagttccactgaatcagctctaagcacaccaagccagtcacaaagcagccaagcctcc
tcactcagctcctcgacaagccagcccatggacaatggccccagcttaattagctccatc
acattgcccccaagctctccctccccctccttctcagacagcacaccgggtggagggagc
ctcctcaacgggccccactcatttcctcaggcctctgagggccttaaggctccggagccc
ctcagctctttgaaggcgatggctgagagagcggcgctgggatcaggaatagagggagag
atctccaacctgcacgtatccaacagagggctgaacgatattttttctgtttcatcggca
gcacccggcacacctgcagctcctcaaccatctgtttcggaggtcagcatccccccttcg
cttggggtttgtccactgggcccaactcctctctccaaagaccatctctaccagcaggcg
atgcaggagtctgcatggacgcacatgcctcacccctctgactctgagaggatcaggcaa
tacctgatgaggaacccatgtcctaccttgccataccaccatcaagtaccaccccaccac
tctgacaccatagagttctaccagaggctgtccacagagacgctcttcttcatcttctac
tacctggagggcaccaaggctcagtatttatctgccaaggctctaaagaaacaatcatgg
aggtttcacaccaagtacatgatgtggtttcagaggcacgaagagcccaagactatcact
gacgagtttgagcagggcacttacatttacttcgactatgagaaatggggccagaggaaa
aaagaggggttcaccttcgagtacaggtatctggaggacagagacttgcagtga
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