Cyprinodon tularosa (White Sands pupfish): 119783088
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Entry
119783088 CDS
T07496
Symbol
vars1
Name
(RefSeq) valine--tRNA ligase isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
119783088 (vars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ctul01007
]
119783088 (vars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ctul03016
]
119783088 (vars1)
Enzymes [BR:
ctul01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
119783088 (vars1)
Amino acid related enzymes [BR:
ctul01007
]
Aminoacyl-tRNA synthetase
Class I (U)
119783088 (vars1)
Transfer RNA biogenesis [BR:
ctul03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
119783088 (vars1)
Prokaryotic type
119783088 (vars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
Val_tRNA-synt_C
tRNA-synt_1e
Spectrin_Anc-1
Jag_N
Snapin_Pallidin
Motif
Other DBs
NCBI-GeneID:
119783088
NCBI-ProteinID:
XP_038140343
LinkDB
All DBs
Position
Unknown
AA seq
931 aa
AA seq
DB search
MMCIPPPNVTGSLHLGHALTNAIQDCLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLK
RERGLSRHDLGRDNFIQEVWKWKNEKGDRIYHQLKKLGSSLDWDRACFTMDQKLSYAVQE
AFIRMHDEGVIYRSKRLVNWSCTLNSAISDIEVDKKELSGRTLLPVPGYKEKVEFGVLVS
FAYKVDGSDEEVIVATTRIETMLGDTAVAVHPADPRYQHLKGKMVLHPFCERKMPIVFDD
FVDMNFGTGAVKITPAHDHNDYEVGERHNLAFINILDENGLLINVPPPFLGMKRFEARTA
VLQALKDRGQFKEIKDNPMVVPVCSRSKDIVEPLLKPQWYVNCRDMGKEAADAVREGRLK
IIPDHHLKTWFNWMDNIRDWCISRQLWWGHRIPAYFVTVNDPAVKPGEDMDGHYWVSGRS
EEEAKDKAAKRFNVSVDKISLRQDEDVLDTWFSSGIFPFSIFGWPNETQDLNVFYPGTLL
ETGHDILFFWVARMVMMGLKLTGKLPFKEVYLHAVVRDAHGRKMSKSLGNVIDPLDVITG
ISLEGLHAQLMDSNLDPVEVEKAKQGQKSDYPNGIPECGTDALRFALCAYTSQGRDINLD
VNRILGYRHFCNKLWNAVKFAMKTLGENFVPSEMAQLSGEESVSDRWILSRLSAAVALCE
AGFKAYDFPGITTSIYNFWLYELCDVYLESVKPVFIKADEDSAAQRQAEVCRQTLYTCLD
VGLRLLSPIMPFVTEELYQRLPRRKPQTDPPSICVTSYPDTAEFCWNSEEVDRDMEFSMT
VVKTIRSLRADYNLTKTRADCYLQCIDAATVSLVQKYNLQIQTLSYSQAVIPLTANQPVP
EGCAVAIASDRCTVNLMLKGLIDVEKEVTKLMTKKGDLEKQMEKLREKMAKSDYKEKVPA
KVQEQDAEKLRQSQTELEKVKEAIENFKKMM
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcatccctcctccaaacgtgacaggatctctccacctgggtcacgctctcacc
aatgccattcaggattgtctgaccagatggcacaggatgcggggggaaaccaccctgtgg
aacccgggctgcgaccatgctggcatcgcaacacaagtggtggtggagaagaagctgaag
agggagaggggtctgagccgccatgatctgggcagggacaacttcatccaggaagtttgg
aaatggaagaacgagaagggagaccgtatttaccaccagctgaagaagctggggtcctct
ctggactgggatagagcgtgctttaccatggatcagaagctgtcctacgcggtgcaggaa
gccttcatccgtatgcacgatgagggggtgatttacagaagcaagcggctcgtcaactgg
tcctgcaccctgaactccgccatatctgacatagaggtggataagaaggagctcagcggc
agaactctgctccctgtgcctggctacaaggaaaaagtagagttcggagtcttggtgtcc
tttgcttacaaggtggatggatcagatgaggaggtgatcgtggccacgacccgtattgag
acgatgttgggagacacggctgtggctgtccacccggcggaccccagataccagcatctg
aaggggaaaatggtgctgcatcccttctgtgagcgcaagatgccaattgtctttgacgac
tttgtggacatgaattttggaacaggtgctgtcaaaatcaccccagctcatgaccataat
gactacgaggtcggagagaggcacaatctggccttcatcaacatcttggatgaaaatggg
cttctcattaatgtgcctcctcccttcctgggcatgaagcgttttgaggccagaacagcc
gtccttcaggcgctcaaggacagaggccagtttaaagagatcaaagacaaccccatggtt
gttccagtctgcagccgttcaaaggacatcgtagagccgctgcttaagcctcagtggtac
gtgaattgcagagatatgggcaaagaggctgcagacgctgtgagagaaggcagactcaag
atcatccccgatcaccacctgaagacttggttcaactggatggacaacattagggactgg
tgtatttcccggcagctgtggtggggtcaccgtattcctgcctatttcgttactgtaaac
gatcctgctgtaaaacctggtgaggacatggatggtcattactgggtgagtggcagatca
gaagaggaggccaaagataaagcagcaaaacgcttcaacgtgtctgtggataaaatttct
ctcagacaggatgaggacgttctggacacttggttctcgtctggcattttccccttctct
attttcggatggcctaatgagacccaggacctgaatgtgttctaccccggcaccttgctg
gagacgggtcatgacatcctgttcttctgggtggcccgcatggtgatgatgggtctcaaa
ctgacgggcaaattgcctttcaaagaggtctatctgcacgctgtggtgcgggacgctcat
ggaaggaagatgagcaagtcgctggggaacgtcattgacccgctggacgtcattacaggg
atctctctagagggtcttcacgcccagctgatggacagtaacctggatcctgtagaggtg
gagaaggcaaagcaaggtcagaagtcggactatccaaacggcatcccagagtgtgggact
gatgctctccggtttgctttgtgtgcctacaccagccaaggaagggacataaacctggat
gtaaaccgcatcctgggctaccgacatttctgcaacaagctttggaatgctgtgaagttt
gctatgaaaacgcttggagaaaactttgttccatcagagatggcccagctgtcaggagag
gagagcgtgtcggaccggtggatcctgtccagactgagtgctgctgtggctctctgtgaa
gctggcttcaaggcctacgactttcctggcatcaccacgtccatctataacttttggctc
tatgagctttgtgatgtctacctggaaagtgtgaaaccagtgtttatcaaagcggatgaa
gacagcgccgcccagaggcaagccgaagtgtgcaggcagacactttacacctgtttagac
gtgggtttgcgacttctttcccccataatgccgttcgtcactgaagaactctaccagaga
ttacctcgacgaaaacctcaaactgatccgcccagcatctgtgtgacatcctacccggac
acagcggagttttgctggaacagcgaggaggtcgaccgtgatatggagttcagcatgact
gtggtcaagacgatccgatctctcagggccgactacaacctgacaaagaccagagccgac
tgctacctccagtgcatagatgctgcaaccgtgtctctggtgcagaaatacaacctgcag
attcagaccttgtcttattctcaggccgtcatccctctgacagccaaccagccggtccca
gaaggctgcgctgtggctatcgcctctgacagatgtactgtcaaccttatgctcaagggc
ctcatcgacgtagagaaggaagtgactaagctgatgacaaagaaaggcgacttggagaag
cagatggagaaactgagagagaagatggcaaagagtgattacaaggagaaggtgccagca
aaggttcaggagcaggatgctgagaagctacgccagagccaaacagagcttgagaaagtg
aaagaagccatagaaaacttcaagaaaatgatgtaa
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