Cyprinodon tularosa (White Sands pupfish): 119783372
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Entry
119783372 CDS
T07496
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119783372
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ctul04040
]
119783372
Ion channels [BR:
ctul04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119783372
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ank_3
Ion_trans
YVC1_C
Ank_4
PEX8_helical
Endonuc_subdom
Imm26
T4SS_AnkD
Motif
Other DBs
NCBI-GeneID:
119783372
NCBI-ProteinID:
XP_038140790
LinkDB
All DBs
Position
Unknown
AA seq
730 aa
AA seq
DB search
MEPEDKEGSYPLLYADSVPMQMDNNFLHLPVPFTDNTDNTVFTRYKVFRAASEGDAAQLD
GLLQYLQVNKKRLTSPDFIDESNGKTALIKALLKLKDGKNDTIEVLIDIAEKTEDVDSFI
NAAYTDDCYKGQTALHVAIERRAFDYVKLLVEKGADVQAKASGTFFQRNLKLGFYFGELP
LSLAACTNQPEIVSFLMENPYSKADPTDKDAQGNTVLHTLVVIADNTQENTEIVASMYDK
ILVQHYKLNKDSNIQLESIENNNGLTPLKLAAKLGKIGLFRHILNREFTDKETWRLSRKF
IEWVYGPVHSSLYDTTFIDTNEDNSVLEIIIYGKEVPNRPEMLKIEPLHSLLQDKWNGFG
SRFFLVRFIFYLMYLAIFTIVTFYRKDGKPPFAVENTPEDHLRCMGEIISVLGAVWFLYK
NITTFKKNPPNLSNLFTDGFSEILFFLQAILLLVCVILYFCGRREYVGLLVLSLALAWMN
VLYYTRGSKELGIYNVMMQRMILGDLLRFLSVYMILLFGFSAAVCALMKDSPEDERNKNL
GLGSSIDVKATECSKPSYNDIRFTILEMFKFTIGMGDLQFADNVEYMAVFQILLIGYIVL
TYILMLNMLIALMGFTVERLSGQSETIWNLQRASTILDMERTLPQCLRSKLYSGATETLP
FENEQDKARNFVRVTEINLKKWRSNLGIERDEDPGDIERHKNKPRTRWNLDKVLQNIHLR
RHRSNDTSVA
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggagccagaagacaaggaagggagctatcctttgctttatgctgactcagtgccgatg
caaatggacaataacttcttacatctgccagttccctttactgataacaccgacaatacg
gtgtttacaaggtacaaagttttcagagcagcatctgagggggatgctgcacaacttgac
ggcctgcttcaatacctgcaagtcaataagaagcgacttacgagcccagattttatagat
gaatctaatgggaaaacagctctcataaaagctttgctgaaactgaaagatggcaaaaac
gacaccattgaagtattgattgacatagcagagaagaccgaagacgtagacagttttatc
aatgcagcttacacagatgactgttataaaggccagacggccttacatgtcgccattgaa
agaagggcgtttgactacgtaaagctgctggtggaaaaaggggctgatgtccaagcaaag
gccagtgggacatttttccagcgtaacttaaagctcggcttctattttggtgagctgcct
ctgtccctggctgcctgcaccaatcagccagaaatagtttcatttctcatggagaaccct
tatagcaaagccgatcctactgacaaagacgcccaagggaacacagttttgcacactctg
gtggtgatagcagacaacacacaagaaaacacagaaattgttgcaagtatgtatgacaaa
atccttgttcagcactacaagctcaacaaagacagcaacatacagctggaatcgattgag
aacaataacggtctgaccccgctgaagttagctgccaaactcggcaagatcgggcttttc
aggcacatattgaacagagaatttacggacaaggagacatggcgactatcaagaaagttc
attgaatgggtctatggacccgttcactcttctctttatgacacaactttcattgacacc
aatgaagacaactctgtgctggagattatcatctatgggaaagaagttccgaatcgccca
gagatgctgaagatcgaacctctacacagccttcttcaggataaatggaatggatttggt
tccaggtttttcttggtgaggttcatattttatctaatgtatctggccatcttcaccatt
gtgaccttctacagaaaagatggaaagccaccctttgcagtggagaacaccccagaagat
cacctccgctgtatgggtgaaattatcagtgtccttggagctgtgtggtttctctataaa
aatataactactttcaagaagaaccccccaaatctaagtaatctatttactgatggattc
agtgaaattctgtttttcctgcaggcaatccttcttctggtctgtgtaatcttgtacttc
tgcggacggagggaatacgtcgggctccttgttctgtctttagctcttgcctggatgaat
gttttgtattacacaagaggttcgaaggagctggggatctacaatgtcatgatgcaaagg
atgatcctgggtgaccttctacgctttttaagcgtctacatgatcctgctttttggattt
tccgctgctgtttgtgccctaatgaaagactcaccagaagatgaaagaaataagaatttg
ggactaggaagcagcatagatgtcaaagcgaccgaatgcagcaagccgagttataatgac
atccgcttcaccatactggaaatgttcaagttcacgatcggaatgggagacctgcagttc
gccgacaatgttgaatacatggcagttttccaaatcctgctcatcggctacatcgtcctc
acttacatcctgatgctcaacatgctcatcgctctgatgggcttcacagtggaaagactc
tcagggcaaagtgaaactatttggaacctacagagagcttccacaattttggacatggag
cgcactttgccgcagtgcttgagaagtaaactgtactccggagcaacagagacgttgccc
ttcgaaaacgagcaggacaaggctcgtaattttgtcagagtgactgaaataaacttgaaa
aaatggcgatccaatcttggcattgagcgagatgaagaccctggagacatagagaggcac
aagaacaaacctaggactcgttggaacctagataaggtgctccaaaatattcacttgaga
agacatcgatcgaatgacaccagcgttgcttag
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