KEGG   Cyprinodon tularosa (White Sands pupfish): 119783573
Entry
119783573         CDS       T07496                                 
Symbol
wdr43
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
ctul  Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ctul00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    119783573 (wdr43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ctul03009]
    119783573 (wdr43)
Ribosome biogenesis [BR:ctul03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    119783573 (wdr43)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_Prp19 WD40_CDC20-Fz Utp12 Beta-prop_THOC3 WD40 WD40_WDHD1_1st Beta-prop_EML_2 ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML WDR90_beta-prop_4th Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT140_1st Beta-prop_VPS8 EIF3I Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_WDR41 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_SPT8 Beta-prop_ACSF4 Beta-prop_HPS5 PEP5_VPS11_N Beta-prop_NUP159_NUP214 Beta-prop_SCAP Beta-prop_Nup120_160 WD40_2 Beta-prop_IP5PC_F NBCH_WD40 Paf1 Tricorn_2nd SGL Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 119783573
NCBI-ProteinID: XP_038141090
LinkDB
Position
Unknown
AA seq 646 aa
MAAGDGSLPQQLPCVFSPKSRQYLAVCAQDGRLRVWNTDSKTLQQEFVPSAHLSATCTCI
AWGPCRTVKEGPQRKKRKSEAAQVEEKADLLAMGTAAGTVLIYSTAKGALHCTLDGAHSG
GVNCVHWHPEDSLLYSGSDDTNIVEWDLQSGKTRSKWKADRAAVTSLSVSPDGKLLLSAG
HVIKMWDLETKEVYRKFTGHSTAVTTLRFATSRPPDSNGLYFLSGAAHDRLLSVWQVRED
RKDKNSVVSFTLTDEPQHIDLIPSSSKEEAVRLAVVCKDGQLHLFEHFLNGPCKKPLSPS
CSVQMSDTQDTPSPIPLLAAALGADPRAVMLAYGNHLQPVMEKVEINTAERHVCLTRDVK
TSLSLSMETTASKVKTPVINAKSKVLVPGLPGHTAPLTAAQQGTEKRKKDSDNKELSIAE
RLGEIDLEAVSSQKGASRATASLQTDNFAVLLMQGLESNDDDILNKVFQTRKDVLIKKTV
ARLPLSAVIPLVEELTKRLQGHPLTACLMVRWLKAVLMHHTSYLASLPDLVAQLGVLYHM
IESRVKMFHKLTKLHGKLHLLTTQVAANDSSNAVSEVDHTAKLVYEEESSDEDDASVDEA
LPDEGSDHWDEEEAMQDDEDDDPDRREEAKANGEEDMEHENESEEE
NT seq 1941 nt   +upstreamnt  +downstreamnt
atggcggcgggcgacggtagcctcccgcagcagctcccttgcgttttttcacctaaatcg
cggcagtacttagcggtgtgtgcccaggacggcagactccgcgtctggaacaccgacagt
aaaactcttcagcaggagttcgtgccttcagcccatttaagcgctacttgtacctgcata
gcatggggaccatgccggacggtgaaggaggggccacagaggaagaagaggaaatcagag
gcggcgcaggtggaggagaaggcggatctgctggctatgggcacagcggctggaactgtc
ctcatctacagtacggccaagggagccctgcactgtactctggatggagctcacagtggg
ggagtgaactgtgtccactggcatcctgaagacagcttattatacagcggctcagacgac
acaaacatcgtggagtgggacttgcagagcgggaaaacacggagtaagtggaaagcggac
cgcgctgcagtgaccagtttatctgtgagccccgatgggaaactgctcctctcagctgga
catgtgatcaagatgtgggatttggagaccaaggaggtttacaggaaattcacaggccat
tccacggccgtgacgaccctgcgctttgccacgtcacggcctcctgacagcaatggcctt
tacttcctgtcaggagcagctcacgacagactcctcagtgtttggcaagtgcgagaagac
aggaaggacaagaactcagtggtttccttcactctgacggatgaacctcaacacatcgat
ctgatcccatctagcagcaaagaagaggctgtacggctggcggtggtgtgtaaggatgga
caactgcatctgtttgagcactttttaaatgggccttgcaagaagccgctgtcgccgtcg
tgttcggtgcagatgtctgacacgcaggacaccccgagtcccatcccgctgctggcggcg
gcgcttggagccgatccgagggccgtgatgctcgcttacgggaaccatctgcagcctgtc
atggagaaagtggagatcaacacagcggagagacacgtatgtttgacacgagacgtgaag
accagcctgtccctctccatggagaccaccgcctccaaggtgaaaactccagttattaac
gcgaaaagcaaagttttggttccagggctgccgggtcatacggcgcctttaacggcggct
caacagggaacggaaaagaggaaaaaagactctgacaataaggagctgtccatagctgag
cgactcggtgaaatcgacctggaagcagtttccagccaaaaaggagcttctagagcgacg
gcttcgttacagacggacaactttgccgttcttctgatgcagggcctagagagcaatgat
gacgacatcctaaacaaagttttccagactcgtaaagatgtgttaataaaaaagacggtt
gctaggttacctctctctgccgttataccgttagttgaagagctaacaaagaggctccag
gggcaccctttgacggcgtgtctgatggtacgatggctgaaggcggtcctcatgcaccac
acatcatacctggcatcgctgccggacctggtcgcccagctgggggtgctttatcacatg
attgagagccgagtgaagatgttccacaaactgacaaagctgcatggaaagctgcatctc
ctaacaacgcaggtggcagcaaatgacagcagcaacgctgtgtcagaggtcgaccataca
gctaaactggtgtatgaggaagagtcgtctgacgaagacgacgcctctgttgatgaagct
cttccagatgaaggctcagatcactgggatgaagaggaggcgatgcaggacgacgaagac
gacgatcctgacagaagagaagaagccaaagcgaacggcgaggaggacatggagcatgaa
aacgagagcgaagaagaatga

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