Cyprinodon tularosa (White Sands pupfish): 119783594
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Entry
119783594 CDS
T07496
Symbol
lingo1a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctul04131
]
119783594 (lingo1a)
Membrane trafficking [BR:
ctul04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
119783594 (lingo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_1
I-set
Ig_3
ig
Ig_2
LRR_9
LRRNT
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
119783594
NCBI-ProteinID:
XP_038141117
LinkDB
All DBs
Position
Unknown
AA seq
615 aa
AA seq
DB search
MVAREATGHSYLVACWQPILILMLGTVLSGSTTGCPSRCECNVPDRSVMCHRKKLMAIPE
GIPAETRLLDLSKNRIRTINPDEFANFANLEHLELSENTISTIEPGAFNNLYGLRTLGLR
SNKLKLIQLGVFTGLSNLTELDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFIAHRAF
HGLNSLEHLSLEKCNLSSVPTEAFTHLHSLITLRLRHLNINSIRDYSFKRLYRLKVLEIA
NWPYLDTMTTNCLYGLNLTSLTIANTNLTTIPYVALQHLVYLRFLNLSYNPIHTIEGNKL
HDLLRLQEFHLVGGRLAMIEPYSFKGLNYLKILNVSGNSLTTLEESAFHSVGNLETLALY
DNPLACDCRLLWVFRRRWRLNFNKQQPTCTSPEFVQGKEFKDFPDVLQPNYFTCRKSRIR
DRKPQQKFVDEGAIVHFACQADGDPAPVIMWLSPQKKFITSKTIGRLSVLPDGTLEVRYA
QIQDNGTYVCIASNAGGNDTSLAHLHIHSYSPDWPHQPNKTFAFISNQPADTGANGTKAN
VPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGMS
STTVDAPRKFNMKMI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggtggccagggaagcgactgggcacagctacctggtggcttgttggcagcccattctg
attctgatgctgggcactgtcctttccggctccaccacaggttgtccatcccgctgtgag
tgtaatgttccagatcgctcagtgatgtgccatcgcaagaagctcatggcaattcctgag
ggcattcctgcagaaaccagattgctggacctcagcaagaaccgcatcagaacgattaat
ccagatgagtttgctaactttgctaacctggaacacctggagctcagtgaaaacactatc
tccacaattgaacctggagcattcaataacctttatggcttgcggacattgggattgcgt
agcaacaagcttaagctgatccagctaggggtattcactggcctgagcaatctcacggag
ctggacataagtgagaacaaaattgtcatcctgttagactatatgttccaggatttgtat
aacctacggtctttagaggtgggggataatgatctggtcttcatcgctcatcgtgctttt
catggccttaacagccttgagcacttgagtctggagaagtgcaacttgtcttctgtgcca
acagaagcttttactcacctccacagtctaatcactctcagactgcgtcacctcaacatc
aattccataagggattactcatttaaacggctctatcggctgaaagtgttggagattgcc
aattggccatacttggataccatgactacaaattgtttgtatggattaaatctcacctct
ctgaccattgcaaacactaacctgactaccatcccttatgtagccctacaacacctggtt
tatttgcgatttcttaatctttcatacaatcccattcataccattgagggaaataagttg
catgaccttctccgtctacaagagtttcacctggttggagggagactagcgatgattgaa
ccatactctttcaaaggtcttaactaccttaagatactaaatgtgtctggaaactctctt
accacattggaggagtctgcttttcactcagttggaaacttggaaaccctggccttgtat
gataaccccctggcctgtgactgccggctcttgtgggtttttcgaagaagatggagactg
aacttcaacaaacagcagcccacatgcacctctcctgagttcgtccaggggaaagagttt
aaagacttcccggatgttctgcagccaaactactttacatgtcgcaagtccaggattagg
gatcgtaaaccccagcagaaatttgttgatgaaggagccattgttcattttgcctgccaa
gcagatggagatcctgctccagtgattatgtggctttctcctcagaaaaagttcatcacc
tccaagacaattggaaggctctctgtgttgccagatggcacccttgaggtgcgctatgcc
cagattcaagataatggtacgtatgtatgtatagccagcaatgcaggcggaaatgacacg
tctcttgctcatctacacattcatagctactcaccggactggccacaccaacccaataag
acttttgctttcatatccaaccaacctgctgacactggtgctaatggtacaaaagccaat
gtccctttcccatttgatataaagacactaattatcgcaaccactatgggtttcatctct
tttcttggtgtcgtcctgttttgcctggtactcttgttcctctggagcagaggtaaaggc
aacacaaagcacaacatcgagatcgagtatgtgccacggaaatcagacgctggcatgagc
agcaccacagtagatgctcctcgcaagtttaatatgaaaatgatttaa
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