Cyprinodon tularosa (White Sands pupfish): 119783737
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Entry
119783737 CDS
T07496
Symbol
arid1aa
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119783737 (arid1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctul03000
]
119783737 (arid1aa)
03021 Transcription machinery [BR:
ctul03021
]
119783737 (arid1aa)
03036 Chromosome and associated proteins [BR:
ctul03036
]
119783737 (arid1aa)
Transcription factors [BR:
ctul03000
]
Eukaryotic type
Helix-turn-helix
ARID
119783737 (arid1aa)
Transcription machinery [BR:
ctul03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119783737 (arid1aa)
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119783737 (arid1aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
119783737
NCBI-ProteinID:
XP_038141311
LinkDB
All DBs
Position
Unknown
AA seq
2286 aa
AA seq
DB search
MAAQVASAATLNTSPPSELKKPDRDPKEETLPGEKQSDKKQPCLDSGSPGRGDLQDGADG
GNAGGGGEPEMKNGNGNPPRVNNNTPNDSVGPDGNNHPGFVHHHGPTFPPPSYGYSQHYG
RPAFHQYGGQQSPGMAAAAGPGVQSSNMMDPYQPNSHDHGFSNHQFNNYNPFPNRTPHPG
QSYGMNSPRSAQAPTAGGQPAKQQPPPGGPTAMAGSYSNQRYNIGNPQPTSTPTLNKLLT
SPSSTRGYPNYPSGGDYSGQEGASKGAADMGSSGQFAGSNPGWQQRTHHPSPMSPGSAGQ
PLARNQPPASMDPMGKMRGQPYGAGSPYSQQSQQVPPTGPQSGPGYPGQGYGPPGPQRYP
VGMQGRTPGGMGAMPYGPQMGSYGQQGPGGYGSQGQAPYYNQPGQAPHQSQQQSLYSQPQ
PGQPGRQSPYPGQSHPPPSTPHNQGGPPYQQPHMAPQSQGPLPGPSQSAPQSQPPYSQAP
ATQPSQSPYSQQQGPPTQNTQQQPSSQAPPGSQGQSSYQGSSQGPQQTPTQQQQVQSHQQ
QQQQPQGHGQHPQGQSAAYQQNAQQQQAQQSPYQRFPPPQQQEISQDSFQSNAPASSQPK
SGPEDGQGRPSSLPDLSGSIDDLPTGTEGALSPGVSTSGVSSSQGEQSNPAQSPFSPHTS
PHLPGIRGPSPSPAGSPASASTPRTGPLSPANLPGTQMPSRPSSVHSDGTLHPTMNPSPM
AQDRGFMQRNPQMPPYGSPQSASALSPRQSSGGQMHPGMAPYQQNNSIASYGQQGGQYGP
QGYPRQPAYGNMPNANYPGPGMGSMNPMAGQSGGPPYAGMPPGRMPPNQMGARPYGPNMG
PGMGPNMPPNMGNMPPQVSSAMCPPPGMNRKPQDPAAMQHPSSNTMLNRMPGYPNMSQSM
MGSGPPYGPPMNSMPGMMNTPGGSPYPMGPNMPNNSSGMAPSPEMNNKMNNKVDGSGTPK
PDSKSKKSNSSTTTCEKITRLYELGPEPDRKLWVDRYLAFVEEKAMGMTNLPAVGRKPLD
LFRLYVSVKEIGGMMQVNKNKKWRDLATALNVGTSSSAASSLKKQYIQCLYAFECKIERG
EDPPPEIFTDNKKNQAAKVQPPSPASLCSTAGSGSLQGPQTPQSTSSSMAEGGDLKPPTP
ASTPHAQMPPMPPGPRSSVNLQDPFSDGGDSNFPRKNMTPNSSYQPGMNTSDMQGRMGPY
EPNKDPFSNMRKVGEQFLPANQGPNNAVGDQQPPQQQPPFNRGPPGAMGTMPMGPRQQYP
YGPGYDRRPEQGMGPEGNMGSGPPQPNPMMPANPDTGMYSPNRFPPQQPRHDSYGNQYPG
QGTPPTGSYPNQQPGMYPQQGYKRPVEGGYPPSKRHEAEYSSSFPGGQQAPQQQQQAGAS
APSSGQQEPYNQYSGSGPYPGPDRRPPGPNNQFPFPFGRERMQGATGPSSQPNMPPQMMQ
SGPEGSQGGMWQGPRDMNYQNYPRQGGPGGPAQAPGYHGINRPDDMMQSDQRMNPDGQWG
SQMGPRQPPYGPAGPGQPMPRSVQSNYQPPQGVQNHIQQVSSPASIPRPMEARTSPNKSP
YIPGLSKMIKAGPPVPASHVVPPPVQSPLIRRDMPFPPGSVEGTLPVLKTRRRLTMKDIG
TPEAWRVMMSLKSGLLSESTWALDTINILLYDDNSIATFDLNTLPGLLELVVEYFRRCLI
EIFGILREYEVGDPGQRTLLDPDALKLDLDNLEEEQPRFEDMEQEETDDEDKEEHETERP
VLVKQEVDQEPCSQSRDEKTQEDKKSKASSSEQTGSSQSLPAHERPRQASKFDKFPLKVV
RKRDPFVAAQLSNHGKVQEFDSGLLHWSAGGGDSTEHIQTLFEPRKNFLEPRQRIPVPSG
LLKRRPLDEDIRGSCLPTEEERNKHIEEDGQKQSSLKEKSTDSEKSGSTASNEEERPSPS
EIKQAEKGPTRHQENNRPVLASLSIFAQQAQQSGTILEDEPHSKDEGPLVTLADWQDSLA
RRCICVSNIVRSLSFVPGNDHEMSKHPGLLLILGRLILLHHWHPERKQAPLTYEKDEESD
EGVGQKDEWWWDCLEILRENTLVTMANISGQLDLSNYPESICLPLLDGLLHWAVCPSAEA
QDPFPTLGPHSALSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYGNLVRLIGDRK
VAVCREMAVVLLANLAQGDTLAARAIAVQKGSVGNLLGFLEDSLAATQLQQSQSSLLHLQ
GMPFEPTSPDMMRRAARALHALAKVEENHSEFTLHESRLLDLSVSPLMNSLVSHVICDVL
FLIGQS
NT seq
6861 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccagcgccgccactcttaacactagtccgccttctgaacttaaa
aagccggatcgagacccgaaggaagaaacgcttccaggagagaagcagtccgacaaaaag
cagccgtgtttggacagcggatcaccgggccggggggatctgcaggacggggcagacggt
ggaaatgcagggggaggaggggagccagagatgaagaacgggaatgggaacccgcccagg
gttaataataataccccgaatgactctgtgggaccggacggaaacaaccaccccggcttc
gtgcatcaccacggtccaactttccctccgccttcgtacggatacagtcagcactacggt
cggcccgcttttcatcaatatggcggacaacaaagccctggcatggcagctgctgcgggt
ccgggtgtgcagtcgagcaacatgatggacccgtatcaacccaattcacacgaccatggc
ttctctaatcaccagtttaacaattacaacccattcccgaacaggactccgcacccgggc
cagtcttatggtatgaactctcctcgcagcgctcaggcgccgacagctgggggccagcca
gctaagcagcagccgccaccgggaggacccacagcaatggctggatcttacagtaaccag
agatataacatcggaaacccccagccgacttccacaccgacgctcaacaagcttctgacc
tcccccagctcaacgcgagggtatccaaactacccgtctggtggcgactacagcggccag
gaaggagctagtaagggagcagcagatatgggcagtagcggtcagttcgcagggagcaac
ccaggctggcaacaaagaacccaccacccgtcacccatgagcccggggagtgctgggcag
cctctagccagaaaccagccccctgcttctatggatccaatgggaaaaatgagaggtcag
ccatatggagcagggagtccgtacagtcagcagtctcagcaggtgcctcctaccggtcct
cagtctgggccagggtaccctggacagggttatggtccaccaggtccacaacggtacccg
gtaggcatgcaaggacgaacaccaggaggcatgggtgcaatgccctatggtccacagatg
ggatcttatggccaacagggaccaggaggttatggctctcagggccaggcaccatattac
aaccagccaggtcaggctcctcatcaaagtcagcaacaatccctttactcccagcctcaa
cctggccagcctggaagacagtcgccataccctgggcaatctcaccctccaccttcaact
ccacataaccaaggtggaccaccttatcaacagccccacatggccccacagtcacaggga
cctttgccaggcccatcccaaagtgccccacagtctcagccaccttattctcaagcacct
gctacgcagcctagccagtctccatattcccagcagcaggggcctcctactcagaacaca
cagcagcagccaagttcccaggctccccctggatcacagggccaatccagttaccaaggg
tcctcacaaggcccccagcaaacccctactcagcaacagcaggtgcagtcccaccaacag
cagcagcaacagccacagggacatggccaacatccacaggggcagtctgcagcttaccaa
cagaacgctcagcagcagcaagcacagcagtcaccttatcagcgctttcctcctccacaa
cagcaggagatatcccaggactcgtttcagtccaatgcccctgcatcctctcagcctaaa
tctggtccagaggacggtcaaggccgtccatccagccttccggacctgtctgggtcgatc
gacgacctgcccacaggtacagagggtgcactgagtcctggcgttagcacctcgggcgtg
tccagcagccagggggagcagagtaatccggcccagtcgcccttctctcctcacacatcc
cctcacctacctggcatccgaggcccttcgccgtctccggccggctcccccgccagtgcc
agcacaccccgcacagggccgctgtcaccggccaacttgccagggacccagatgccttcc
aggccatccagtgtgcactcagatgggacgctgcaccctacaatgaacccgtctccaatg
gctcaggacagagggttcatgcagagaaaccctcagatgcctccttatggctccccccag
tcagcctctgcactttcgcctcgccagtcctctggaggacagatgcatcctgggatggcg
ccttatcagcagaacaattcaattgctagctacgggcagcagggaggacagtacggtccc
caaggttaccctcgccaacctgcctatggcaacatgcccaatgccaactaccctggacca
ggcatgggctccatgaaccccatggcaggacagagcggaggccctccatatgctggcatg
cctccaggaagaatgcctcctaatcaaatgggtgctcgtccgtacggccccaatatgggt
cccgggatgggtccaaacatgcctcctaacatgggcaacatgccaccccaggtcagttca
gcaatgtgcccacctccaggaatgaacaggaagccccaggatcctgcagccatgcagcac
ccctccagcaacaccatgctcaacagaatgcccgggtaccccaacatgtcacagagcatg
atgggctctgggccaccgtatggcccaccgatgaacagcatgcctggaatgatgaacact
ccaggtggatctccttatcccatggggccaaacatgcccaataactctagtggaatggct
cctagtccggaaatgaacaataagatgaataacaaagtggacggcagtggaacgccaaag
ccggattcaaaatcaaagaagtcaaactcatccacaaccacatgtgaaaagataacacgt
ctttatgagctgggaccagagccagacaggaagctttgggtggaccgttacttggccttt
gtggaggagaaagccatgggtatgaccaacctgcctgccgtggggcgcaaacccctcgac
ctcttccggctgtacgtttccgttaaagagatcggaggaatgatgcaggtgaataaaaat
aaaaagtggcgtgatctagccaccgccttaaatgtgggaacatccagcagcgccgccagt
tctttgaaaaaacagtacattcagtgtctgtatgctttcgagtgcaagattgagcgtggt
gaagatcctcctcctgagatcttcactgacaacaaaaagaaccaagctgctaaagtccag
ccaccctctccagcgtccctctgttccacagccgggtctggctctctacagggtccacag
acaccccagtccaccagcagctccatggctgagggaggcgaccttaaaccccccacgccg
gcctccacccctcatgcccaaatgcctcccatgccacctggtccaaggagcagtgtaaat
ctacaagaccccttttcagacggaggcgattccaatttcccaagaaagaacatgactccc
aactcctcctatcagcctggcatgaacacatcggacatgcaaggccgaatgggcccctac
gaacccaacaaagacccctttagcaacatgcggaaagttggtgagcagtttctgcctgct
aaccagggccctaacaacgctgtaggtgaccaacagccaccacaacaacagcctccattc
aacagaggaccaccaggggccatgggcacaatgccaatgggacccagacaacagtacccc
tatggaccaggctatgaccggagaccggagcaaggaatgggcccagagggcaacatggga
tctggacctcctcagccaaacccgatgatgcctgccaaccccgacacggggatgtattct
ccaaatcgcttcccaccacagcagccacggcatgattcctatggaaatcagtatcctgga
caagggacgccccctactggttcctacccaaatcagcaacctggaatgtacccacaacag
ggttataaacgtcctgtggaaggaggctaccccccatcgaaacgccacgaagcggagtat
agcagttctttccctggtggacagcaagcaccacagcaacagcagcaggctggtgcttct
gccccatcatcaggacagcaggaaccgtacaatcagtacagcggcagcgggccctacccg
ggccctgaccgccgtccacctggccccaacaatcaattcccctttccatttggtcgagaa
aggatgcagggagcaactgggccaagctcccagcctaacatgcctcctcagatgatgcag
tcggggcctgagggctcacaggggggcatgtggcagggaccacgagatatgaactatcag
aattaccccagacagggtggtcctggggggccagcgcaggctcccggctaccatggcatc
aacagacctgatgatatgatgcaatcagaccagcggatgaatccggacggccagtggggg
tcccaaatgggccctcggcagcctccctatggtccggcggggcctggacagcctatgcct
cgttcagtccagtccaactaccaacccccccagggtgtgcagaaccacattcaacaggtg
tcaagccccgcctccataccccgccctatggaggcccggacctcaccgaataaatcccct
tacatacctggactatcgaagatgataaaggccggccctcctgtccctgcatcccacgtg
gtgcctcctccagtgcagtcgcctctaataaggagagacatgcctttcccccctggctcc
gtcgaaggaactctacctgtccttaaaacacgacggagactcaccatgaaagatatcgga
accccagaagcctggagagtcatgatgtcattaaaatctggtttattgtctgaaagcaca
tgggctttagataccatcaatattctgctgtatgatgacaacagtatagcaaccttcgat
ctcaacacgttacctgggctactggagctggtggtggagtactttaggcgctgcctcata
gaaatattcggtattctgcgggaatatgaagtcggggaccctggtcagaggactctgctc
gatcctgacgccttgaaattagacctggacaacctggaagaagagcaaccacgttttgag
gatatggaacaagaggaaacggatgacgaagataaggaggaacatgaaacggagcggccg
gtgctcgtgaaacaggaggtggaccaggagccgtgctcgcaaagtcgagatgagaaaaca
caagaagacaagaagagcaaggcttcttcatctgagcagactggctcgtcgcaatctcta
cctgcccacgagagacccaggcaggccagcaagtttgacaagtttccacttaaggtggta
cgaaagagagacccatttgtggctgcccagttaagtaatcatggtaaagtacaagagttt
gacagtggactacttcactggagcgccggaggaggagactcgacggaacacatccagacc
ctctttgagccgcgtaaaaacttcttagagccacgacaaaggatacccgtgccttcaggt
ctgctgaagcgacggccactggatgaagacatacgagggagctgcttgccaactgaggaa
gagagaaataagcatatagaggaagacgggcagaaacagagcagtttgaaagaaaaatca
acagattctgagaaatccggctcaacagctagcaatgaggaggagcggccgtctccttca
gagataaagcaggctgagaaagggcctacaaggcaccaggagaataatagacctgttctg
gcctctcttagtattttcgcccaacaagcacagcagtctggcaccatcttagaagatgag
cctcacagtaaagacgaaggaccgctcgtcacgctggctgattggcaggattcgttggcg
cgtcgctgcatttgtgtgtctaatattgtccgcagcctttcctttgtgccgggaaatgac
cacgagatgtccaaacatcccggactgctgctcatactcgggcgcctcatcctgctccac
cactggcaccccgagcgcaaacaggccccgctcacctacgagaaggacgaggaatcggac
gagggagtgggccagaaggatgagtggtggtgggactgcttagagatccttagagagaac
acactggtcacaatggcaaacatttcaggccagctggacctctccaactaccctgagagc
atctgcttgcctttgctggacggtcttctccactgggcggtgtgcccctcggcagaggcc
caggaccccttccctaccttaggccctcacagtgctttgtcccctcagagactggttctg
gagactctaagcaaactaagcatccaagataacaatgtggacctcatattggccactccc
cccttcagccggttggagaaactgtacggaaacctggtgcggttaatcggcgatagaaaa
gtggccgtctgcagagagatggccgtcgtcttactggccaacctggcccagggtgacacg
cttgctgctcgtgcgatcgccgtccagaagggcagcgtgggcaacctgcttggcttcctg
gaggactctctcgctgccacccagctacaacagagccagagctccctgctgcacctccaa
gggatgcccttcgagcccaccagcccggacatgatgcggcgagctgcccgggcgctgcac
gccttagccaaggtggaggagaaccactcggagtttacactacacgagtcgcgactcctc
gacctctctgtgtctccgctaatgaactcgctggtttctcatgttatttgtgatgtactc
tttttgatcggccagtcatga
DBGET
integrated database retrieval system
