Cyprinodon tularosa (White Sands pupfish): 119783753
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Entry
119783753 CDS
T07496
Name
(RefSeq) collagen alpha-1(XIV) chain-like
KO
K08133
collagen type XIV alpha
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ctul00535
]
119783753
Proteoglycans [BR:
ctul00535
]
Extracellular matrix (ECM) proteoglycans
Others
119783753
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
VWA_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Collagen
FN3_Tor_3rd
NDNF
VWA_3
Motif
Other DBs
NCBI-GeneID:
119783753
NCBI-ProteinID:
XP_038141330
LinkDB
All DBs
Position
Unknown
AA seq
1560 aa
AA seq
DB search
REEWSRHLILRMFLMGEVRWRLLALLVLLAFVSCHPSKAESQVSAPRRLRFKVHSSSRLL
VSWREPKGDVDSYLFLYNSLPGGQQKEMFVSKSDTRVIIPDYNPSKDYIISVIAVRGSEQ
SRPLQGRFKAKKAARGESDGRDEIEPQKLTDSVRPPDGANEISGADQFVCHTEAIADIVI
LVDGSWSIGRINFRLVRMFLENLINAFDIGIDKTRIGLAQYSGDPRIEWHLNTYSTKDTV
IDAVKNLPYKGGNTLTGLALNFIMDNCFKPESGSRAGVPKIGILITDGKSQDDVVPPAES
LRKAGVELFAIGVKNADENELRSIASEPHHSHVYNVADFNIMSSIVEGLTKKVCEQVELQ
DKDIKQKFTPQNMGMPHSLETSETTAQSFRVSWSPAPGNVETYRVVYRPAQGGESQEVVM
PGSETSVVLEHLSSLTEYQLAVFAVYEDETSEALRGSETTLPLPSVSRLQLLDITHSSMR
ARWSRVDGVSGYTVLYSPLTVDGDLNNNGCCPQVNVANGVTEVELSDLAPNTEYAVTVYA
MYGEEASEPITSQEATLPLSPPRNLQFSDITHNSAHISWDPPPGGVKGYRIMCVRTDGVI
TKEVMVGPVNSFDLRKLTSLMEYSVAIFALYNEGQSEPLTDGFTTTPIPGPLNLRSSDID
TDSFTVSWDHSAMAISLYRLSWGQLSGGDTREVILRGDENTYTLSDLSPSTEYEVLLTAI
FDDESESDTVSVIETTLAATTTIQPTTTVTRKAVKNLYLSDETTQSLDASWELEDPNVES
YRISYSDLSGDQGEESISVGGGQKNAVLQHLLPDTQYKVTVTPVYSDGQDGISASALGST
LPLLPPENLRVSEESYNRFLVSWDPPQSPTEGYRIVYRPVYDQGPLSETTVGEDVTSVVL
LNLLSGTEYTVQVTAFYSAGPSEPELVNAKTLFLGVSGLSTYQVHPKSMCVQWQPLLHAT
SYRLSIQSTLNGQRQELTLGGSASHHCFYELTPSSQYQISINTQMQEMEGPSVSITDMTL
PEPTQAPTEPPTTEPTPTIPPAKEVCKEAKADLAFLVDGSWSIGDDNFMKITRFLYSTMG
SLDLIGPDGTQVAVAQFSDDARTEFLLSSHSNKEALLEAIQKIRYKGGNTKTGRAIKHVK
ESIFTSDAGARRGVPKVLVVLTDGRSQDDVNKVSKEMQMEGYIIFAIGFADADYGELVNI
ASKPSDRHVFFVDDLDAVKKIEEQLITFVCEAATATCPSVLMSGNTLAGFKMMEKFGLVE
KEYSTIPGVSMEPGSFNSYPCYRLHRDALVSQPTKYLHPEGLPSDYTVSMMLRLLPETPQ
EPFALWEILNKGNEPIVGLILDSSGKTLTFFNHDYRGDFQTVTFEGPDIKKIFHGSFHKL
HVTVSKTSVKVVLDCSAVGEKSIRAAGNITTDGVEVLGKMVRSRGRRDSSSPFQLQMFDI
ICSTSWASRDKCCELPALRVEEQCPPLPHACTCSQESKGPPGPSGPPGGPGIRGARGDRG
EPGVTGPQGPTGEIGPSGPPGPPGPQGPSGLSIQGPPGIRGEKGERGDVGPAGPMASYDS
NT seq
4683 nt
NT seq
+upstream
nt +downstream
nt
agagaagaatggtctagacacctaattttgaggatgtttttgatgggagaggtcaggtgg
cgtctgctggccttgctggttttgcttgcctttgtttcctgccaccccagtaaggctgag
agtcaagtttcagctccaaggaggctgcgtttcaaagtgcacagttccagcagacttctt
gtttcatggagggagcccaaaggagatgttgacagctatttatttctctacaacagctta
ccaggtgggcagcagaaggagatgtttgtgtctaaatctgacacgagagttataataccg
gactacaacccttccaaggactacattattagtgtcattgctgtgagagggagtgagcag
agtagaccacttcagggcagatttaaagctaaaaaagctgccagaggtgaaagtgatgga
agagatgaaattgaaccccaaaagcttacagattcagttagacctcctgacggcgctaat
gagatatctggagccgaccagtttgtgtgccacactgaggccattgcagatattgtgatc
ttggtggacggctcgtggagcataggccggatcaacttcaggctggtccgtatgtttttg
gaaaacctgatcaatgcattcgatattggcattgataagaccaggataggtctggcacag
tacagtggtgatcccaggatagaatggcatctaaatacttactctacaaaagacactgtc
atcgatgcagttaaaaacttgccatataaaggaggaaacactctcacagggcttgcattg
aattttattatggacaactgtttcaagcctgagtctggctcaagggcaggtgtgccaaag
attgggattctcatcacagatggaaaatcccaggacgacgttgtacccccagcagagagc
ttgcgaaaagctggtgttgagctgtttgctattggcgtaaagaatgctgatgagaatgag
ctgcggtctatcgcctctgagccacatcacagtcacgtctacaatgtggctgacttcaac
attatgagctctatagtcgagggattgacaaagaaagtgtgtgaacaagtggagctgcaa
gacaaagacatcaagcagaaatttacgccacaaaatatgggaatgccacacagcctggaa
acctcagagaccacagctcagagctttcgcgtgtcatggagtcctgcgcctggaaatgta
gagacgtacagagtggtttatcgccctgctcagggaggagagtcacaggaggttgtcatg
cctggcagtgagacctctgtggtgttagagcatctcagctctctaaccgagtaccagctc
gctgtgtttgccgtgtatgaggatgaaacaagtgaagctctaagaggatcagaaaccacc
ttgcctctcccatcagtgagccgcctccagctgttagatattactcacagcagcatgaga
gccagatggagccgtgtggatggagtctctggctacacagtgctctattcccctctaaca
gttgatggagacttgaacaacaatgggtgttgtccccaggttaatgtagcaaatggagta
actgaggtggagctgagtgacttggcgcccaacacagaatatgctgtcactgtttatgct
atgtatggagaggaggccagtgagccaataacaagtcaggaagcaacattgcctctcagt
cctcccaggaatctccagttttcagacatcactcataactctgcccacatcagctgggac
cctccgcctggcggagttaaaggttaccgcatcatgtgtgtcaggactgatggagtgatc
acaaaagaggtgatggtgggcccagttaattcttttgacctcaggaagctgacttctctg
atggagtactcggtggccatctttgctctgtacaacgagggccaatcagagccgctcact
gatggcttcacaaccactccaattcctggtcctcttaatctgcgttccagcgacatcgac
acagacagcttcacggttagctgggatcactcagccatggccatctctctctacagactc
tcttggggacaactttcaggtggtgatacaagagaggtgattttgagaggagatgaaaac
acatacaccctcagcgacctcagcccttccaccgaatatgaagtcctgttaacggccatc
tttgatgacgaatctgaaagtgacacagtctctgttatagaaaccacattggctgcaact
acaacgattcaacccacaaccacagtgacacgtaaggctgtgaaaaacctttacctgagt
gatgagaccacccaaagcttagacgcatcctgggagctggaggaccctaatgtggagagc
tacaggatttcctactctgacctcagcggggaccaaggggaggaatctatctcagttggg
ggtggtcagaaaaacgcagtgctccagcatttactaccagacacacagtacaaagtgacg
gtgacgccagtgtacagtgatggacaagatggcatcagcgcttccgccttgggttctaca
ttgcctctcttgcctcctgaaaatctacgcgtgtcagaagagtcgtataaccgcttcctg
gtctcctgggatccgcctcagtctccaacagaaggttacaggattgtctatcgacccgtc
tatgatcaaggtccactttcggagacaactgtaggtgaagatgtgacctccgttgtcctt
ctcaatcttttgagtgggacagagtacactgtccaagtgacggccttctactcagcagga
ccaagtgaaccggaactcgttaatgcaaagacattgttccttggtgtttctggcctgtcg
acctatcaggtgcatcctaagagcatgtgtgttcagtggcagcctcttctacacgccacc
tcatatcggctctccatacagtccaccctcaatggtcagagacaagaactaaccctggga
ggttcagcttcacaccactgtttctatgagctcacacccagcagccagtaccagatcagt
ataaacactcaaatgcaagaaatggaaggaccatctgtatctattactgacatgacatta
ccagagcccactcaggctccgactgaaccacccaccacggagcccactcccaccatccca
cctgctaaagaagtatgtaaggaagccaaggctgacctggcatttttggttgatggctct
tggtctatcggggatgacaacttcatgaagatcacacgctttctctacagcacaatgggc
tcattagatctgattggaccagatggcacccaggtggccgttgctcagttcagtgatgat
gcacggacagaatttctgctgagttctcacagcaacaaagaagccctgctggaagccatc
cagaagatcagatacaagggggggaacaccaagacaggtcgagccattaaacatgtgaag
gaatccatcttcacctcagatgcaggagcgaggaggggtgttcccaaggttctggtagtt
ctgactgatggtcgttcacaagatgatgtcaacaaagtgtcaaaggagatgcaaatggag
ggctacataatctttgcaattggatttgcggatgcagactatggagagctggtgaatatt
gccagtaaacctagtgacaggcacgtctttttcgtggatgatttggacgctgtgaagaaa
atagaagagcagcttatcacctttgtctgtgaggccgccactgccacttgtccatctgtt
ctgatgagtggcaatacactggcgggttttaaaatgatggagaagtttggcctggtagag
aaggagtacagcaccatacctggagtttctatggagcctggttcatttaacagctacccc
tgctacaggttgcaccgcgatgctctggtgtcacagcccaccaagtaccttcaccctgaa
ggtttgccttcagactacaccgtttctatgatgctccgtttgctccctgagaccccgcag
gaaccctttgctttgtgggagatcctcaacaaaggcaatgagccgatcgtgggactaatc
ctcgacagctctgggaagacgctgacattcttcaaccacgactacagaggagacttccag
actgttacatttgaaggaccagacatcaagaaaatcttccatggcagcttccacaagctc
catgtaactgtcagcaagacatcggtgaaggtggtgttagactgttctgcagtgggagag
aaatccatcagggcagctggaaatatcaccacagacggagtcgaagtccttgggaaaatg
gttcggtccagaggcagacgggacagctcttctccatttcagttgcagatgtttgatatc
atctgcagcacgtcctgggccagcagagataaatgctgtgagctgccagctttgagagtg
gaagagcagtgtcctcctctgcctcatgcctgtacctgttcccaagagagcaaaggacct
ccaggaccttctggaccccctggtggacctggcataaggggagccagaggagacagaggg
gaaccaggagtgacgggaccacaggggcctacaggagaaatcggtccatctggacctcca
ggaccgcctggccctcagggacccagtggactctccattcagggacccccaggtattcgg
ggagaaaagggagaaagaggcgacgttggaccagcagggccaatggcaagttacgattca
tga
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