Cyprinodon tularosa (White Sands pupfish): 119783845
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Entry
119783845 CDS
T07496
Symbol
dscamb
Name
(RefSeq) Down syndrome cell adhesion molecule homolog isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ctul04515
]
119783845 (dscamb)
Cell adhesion molecules [BR:
ctul04515
]
Immunoglobulin superfamily
DSCAM family
119783845 (dscamb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
Ig_4
C1-set
Sp38
V-set_CD47
fn3_2
C2-set_3
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
119783845
NCBI-ProteinID:
XP_038141465
LinkDB
All DBs
Position
Unknown
AA seq
2071 aa
AA seq
DB search
MWILAFIFLQSILNVFGEDLHSSLYFVNASLQEVVFASTTGTSVPCPAGGAPPASLRWYL
ATGEEIYDVPGIRHVHTNGTLQIFNFLPSSFSKLIHDNTYYCTAENPSGKIRSQDVHIKA
VSREPYTVRVADQKAMRGSVAVFKCIIPASVEAYVSVVSWEKDTVSLSSGQRYLITSTGA
LYIVDVLPEDGLNNYRCTTRHRYTGETRQSNSARLIVSDPTNAEPAILDGFDHREVKINH
RVELPCKASGFPTPKYRWLKDNSPLEPDSRFRQTISGLLIENAQPSDSGTYVCEVWNSYG
NAEVMGRLYVKQPLKAMVSPRKVKGSVGSKVSLSCSVSGSDEYELSWYRNGEIIYPGNNV
RFTGLNRENLIIEGMTKSDGGAYQCFARKGKMSAQDFVQVILEDGTPKILSSFSEKVVNP
NEPLFLVCNVKGTPPPRCSWSLDDDPVIKDGHHNLGHYETHEGHVISQLNVTHTQVQDGG
LYRCTCSNSAGVVYHQARINVRGRATIRPMKNITAIVGRDAFVHCRVIGYPYYSIKWYKN
SALLPFNHRQRAFENNGTLKLSNVQQSDAGEYNCKVMVQPNKMESQSVHVRVRVPPYIQP
FEFQRFTIGQRVFIPCVVMSGDRPLDITWQKDGRPIPISLGVTVDNIDFTSSLRINNLTP
DHNGNYTCIARNEAAVVEHQSQLIVRVPPQFVVQPEDQDGIYGKTVTLNCSAEGYPPPTI
VWEHSKGAGVPQFQPILLNSGSRIQLLSNGSLLIKHVLEDDSGFYLCKVSNDVGADVSKS
MYLTVKIPAMITSYPNTTLATQGEEKRMSCIAHGEKPIMVRWEKEERIINPETSRYVVTY
KEVADEVVSTLVIMPTVREDSGFFSCHAINSFGEDRGIIQLTVQEPPDPPEVEIREVKDR
TIALRWTMGFDGNSPITGYDIECKNKTASWLSAQVTKDVSPQLNQATIIDLHPSSTYNIR
MVAKNIIGNSNPSNELTITTDEAAPDGPPQDVTLEPTSPQSIKVSWKPPHKHLQNGVIRG
YQVGYREYSPGGSHQFTIISVDSTGDTTESIMLDNLKKFTQYSVVVQAANRAGTGPSSQQ
VVTKTLEDVPSRPPENVLAVAKSPEVISLSWMPLPREALNGNLQGYRVIYWANLPDGELG
EIRNVTTGQPSLELDGLEKYTNYSIQVLAFTNAGDGVRSEQIYVRTKEDVPGPPAGVKAA
ASSSSAVFVSWLPPLKLNGIIRKYIVFCSNLHPMVLVMSEFEASPDKYFYRIPNLARNRQ
YSVWVVAVTAAGHGNNSEKITVEPLPEAPARILTFNGTVTTPWMKDIVLPCKAVGDPPPT
IKWLKGNTNGTPTPVIVDGRRSVHGNGSFLIRTVKAEDSGNYSCVASNNWGSDEITLNLQ
VQVPPDQPRLTVTKTTTTSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERS
YRLENLKCGTWYKFTLTAQNAVGPGRISEIIEAKTHGKEPQFAKEHEIFTSINSSRARLN
LAGWNNGGCPITSFILEYRAVDSATWTTAQRTSLTKSYILYDLQEATWYELQMKVTNSAG
SAEKRVTFATLNADGSTIPPLLKTGDPISDNMSGSGGLKMVVTITSVLVVAVLVFIMLMV
LKRRRREQRLKRLRDAKSLAEMLMSKNTRTPDTVNKQQQTLRMHIDIPRAQLLIEERDTM
ETIDDRSTVLLTDNDFGETNKQKSSTVTHTVHYQSLSQATGPLVDVSDARPGTSESHHHP
TARRTAKAGPAAARSRYASQWTLNRPHPTSSSHTLTTDWRLPTPRATGSVDKESDSYSVS
PSQDTDRARSSMVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQMTA
GTNDYTDSLTSSTPSESGICRFTASPPKPQDVSRVMNMAVPKAHRPGGELVHLPPYLRMD
FLLNRGVPLPARGGGVSSSSSVGSSGGAAGASGGGSAGESRGAGGAMGQACLEPQRSRTL
KRPPPMEPTPMEVPSPREVQQWQPGTASTLPHRDVRDRGEARGEVRGEAPPSGDLAQAQA
AKLSTSQESLLDSRGHLKQSNNPYAKSYTLV
NT seq
6216 nt
NT seq
+upstream
nt +downstream
nt
atgtggatattggcttttatcttcctccagagcatcttaaatgttttcggtgaagatctt
cattccagcctatactttgtcaatgcatctctgcaagaggtagtatttgccagcacaacg
ggaacttcggttccctgtcccgctgggggtgctccgcccgcttcgctgcggtggtatttg
gctaccggcgaggagatctacgatgtcccgggcatccgtcacgtccacaccaatggaacc
ctccaaatcttcaacttcctgccatccagcttcagcaagctgatccatgacaacacgtac
tactgcactgccgagaacccttctggcaagatcaggagtcaggatgtccacatcaaagct
gtttcgcgggaaccctacactgtcagagtggctgaccagaaggctatgcgaggcagtgtg
gccgtcttcaagtgcattatccccgcctcggtggaggcctacgtctccgtcgtatcatgg
gagaaagacacagtttcactgagctcaggacaaagatatctcatcacatctacgggagcc
ttgtacattgtggacgtcctgcctgaggatggcctaaataactaccgctgcacaacacgc
catcgctacacgggtgagacccgccagagtaacagcgcgcgtctcattgtgtcagacccc
accaatgctgagccagccattttggatggctttgaccacagagaggtaaagattaatcat
cgagtggagctcccctgtaaagcctcaggcttccctacacccaaataccgctggctgaag
gacaacagccctctggagccagacagtcgctttcgccagaccatctcagggttgctcata
gagaatgcacagcctagtgactctgggacgtatgtatgtgaagtatggaacagttatggc
aacgcagaggtcatgggacgcctgtatgttaaacagcctttgaaagcaatggtcagccct
cgaaaggtgaaaggcagtgtgggtagcaaggtgtctctctcttgtagcgtgagtggttcc
gacgaatatgagctgtcatggtatcgcaacggagagatcatctaccctggaaacaatgtt
cgcttcacagggcttaaccgggagaacctaatcattgagggaatgacaaaaagtgatggc
ggagcttatcagtgctttgccaggaagggcaagatgtctgcacaagactttgtgcaggtt
atcctcgaagacgggaccccaaaaatcttgtcctctttcagtgagaaggtggtgaacccc
aacgagcccctgttcctggtctgcaacgtgaagggaacgccgcctcccaggtgcagctgg
tcgctggacgacgaccccgtcatcaaagatggccaccacaacctgggccattatgagacc
catgaaggccacgtaatcagccagctcaacgtgacccacacccaggtgcaggacggcggg
ttgtatcggtgcacgtgcagcaactcggccggggtcgtgtaccaccaggctcgaataaac
gtaagaggccgtgccaccatccgccctatgaaaaacatcacagccattgtagggcgggat
gcctttgttcactgccgcgtgattggctatccttactactccataaagtggtacaaaaac
tcagccctgctcccatttaaccaccgacaacgagcttttgagaataatggtactttgaag
ctgagcaacgtgcagcagtcagatgcaggagagtacaactgcaaggtgatggtgcagccc
aacaagatggaatcccagagtgtccacgtccgggtgagagtccctccgtacatccagccc
tttgagtttcagcgtttcactatcggtcagcgtgtgttcataccttgcgtggtcatgtcg
ggcgaccggcctttggacatcacctggcagaaggatggacggcctattcccatcagcttg
ggcgtgacagtcgacaatatcgactttaccagctcgctgcggataaacaacctgacacct
gaccacaacggcaactacacctgcatcgcccgcaacgaggccgctgttgtggagcaccag
agtcagctcattgttcgagttcctcctcagtttgtggttcagcctgaggatcaagatggg
atctatgggaaaactgtgacccttaactgctccgctgaaggctatccaccacccactatt
gtttgggagcactccaaaggtgccggagtcccccagtttcagcccatcctgctgaacagc
ggctctcgaatccagctgctgagcaacggttcgctgcttatcaaacacgtgctggaggat
gacagcggcttctacctgtgtaaggtcagcaacgacgttggagctgatgtcagcaagtcc
atgtacctcactgtcaaaataccagccatgatcacctcctacccaaacaccactctggcc
acgcaaggtgaggagaagaggatgagctgcattgctcacggggagaaacccatcatggtt
cgctgggagaaagaggagcgcatcatcaaccctgaaaccagccgatacgtggttacttac
aaggaagtggctgacgaagtcgtctcaacactagtgatcatgccaactgttcgcgaggac
tcagggttcttctcctgtcatgccatcaactcctttggtgaggacagaggcatcatacag
ctgactgtgcaagaaccaccagatcctccagaggtggagatccgggaggtcaaggacaga
actatagctctccgctggactatggggtttgacggcaacagtcctatcacaggatacgat
attgagtgcaagaacaaaacagcttcatggttgtctgcgcaggtaaccaaagatgtgtca
ccgcagcttaaccaagccactattattgacctccatccttcttcaacgtataacatccgt
atggttgccaagaacattattggaaacagcaaccccagcaatgagctcaccatcactact
gatgaagcagctcctgatggccctccacaagatgtcactcttgagccaacttccccacag
agcatcaaagtttcctggaagcccccccataagcatttgcaaaacggtgtgatccgcggc
taccaggtgggctacagggagtacagtcctggagggagtcaccagtttactattatcagt
gtggattcaacaggagacaccaccgagagcatcatgctggacaatctgaagaagttcact
cagtacagcgtggttgttcaggctgcaaacagagctggaacaggaccttcttcacagcag
gtggtcaccaagaccctggaggatgtgccctcccgacctcctgaaaatgtgctggctgta
gccaaatctccagaggtgatttccctctcctggatgcctctaccaagagaagctctcaat
gggaacctgcagggctacagagtaatctactgggcaaatctgcctgatggagaacttggt
gaaatccggaatgtgacaactggccagccttctctggagctggatggtttagagaagtac
accaactacagcatccaggtcttagctttcactaatgctggagatggagtccgcagtgag
cagatctatgttcgcaccaaagaggatgttcctggtccaccagcaggagtaaaggctgca
gcctctagcagctctgctgtgtttgtctcctggctgcctccgcttaaacttaatggcatc
atcagaaaatacattgtcttctgctctaacttgcatcccatggtattagtgatgagtgag
tttgaggcatctcccgataaatatttttacaggatcccaaatttggctcgaaacagacag
tacagtgtctgggtggtggcagtgacggctgcagggcatggaaacaatagtgagaagatc
accgtggagcctttacccgaagctccagctagaatcctgacatttaatggaacagtcact
actccctggatgaaggacattgttttaccatgcaaagctgttggagatcctcctcccacc
atcaaatggctcaagggaaacacaaatgggacacctacgcctgtaattgtggatggtcgt
cgtagcgtccatggcaacgggagcttcctaatccgtacagtaaaagcagaggactctggg
aactacagctgtgtggccagcaacaactgggggtctgatgagatcaccctgaacctgcag
gttcaagtaccccctgaccagccccgtctcacagttaccaagactaccaccacgtcaatc
acgttgtcatggatacccggagacaacggagggagctccatcagaggttacattctgcag
tactcggaggacaatagcgagcaatggggcagttttcccatcagccccagtgagcgatct
taccgtctggagaatctgaagtgcggcacatggtacaaatttaccctgacagcccagaac
gccgtgggtccaggacgcatcagtgagatcattgaggcaaagactcatgggaaagagcca
caatttgccaaagaacatgaaatcttcaccagcatcaactcctccagggccaggctcaac
ctggccggctggaacaatggaggctgtccgatcacctccttcatcctggagtacagagca
gtggattcagccacatggaccacagcccagcgcacctcgctcaccaagagctacatcctg
tacgacctacaagaggccacatggtacgagctgcagatgaaggtcaccaacagcgccggc
tcagcggagaaacgggtcaccttcgctactctaaatgcagatggaagtaccatccctcct
ctgctgaagacaggagatcccatctcagacaacatgtcaggcagcggaggtctgaagatg
gtggtgaccatcacctctgttcttgtggtggctgtgctggtttttataatgctaatggtg
ctaaagaggagacggagggagcagaggctcaaaagactcagagatgccaaaagcctggca
gaaatgctgatgagtaagaacacacggacgccagacacggtaaacaagcagcagcagacc
ctgagaatgcacatagacatccctagagcccagctcctcattgaagagcgggacacaatg
gaaacaatcgatgacagatccactgtgctgcttacagacaatgattttggggagactaat
aagcagaagtcttccacagtgacccatacagtccactaccagtctctgtcccaggccact
gggcccctggtagatgtatccgatgccaggcctggaaccagtgagtcccaccaccatcca
actgccagacgcactgccaaagctggtcctgctgcagcacggagccgctatgctagccag
tggactctgaaccggccgcatcccaccagctcctcacacaccctgaccaccgactggaga
ctccccacaccgcgtgccactgggtctgtggacaaagagagtgacagctacagcgtcagt
ccctcacaggacacagatcgtgcacggagcagcatggtctcaacagagagtgcttcttct
acttatgaggagctggccagagcctatgagcacgccaagatggaggagcagctccgtcac
gcaaagttcaccatcacagagtgcttcatctctgacacgtcgtcagagcagatgacagca
gggaccaacgactacaccgacagcctgacttccagcaccccatcggagtcaggcatctgc
cgctttaccgcttccccgcccaaacctcaggatgttagcagggtcatgaacatggccgtg
cccaaggcgcacagaccaggaggagagttggtccacctgccaccctacctccgtatggac
ttcctgttgaatcgtggcgtgcctctgccagcccgaggagggggcgtcagcagcagtagc
agcgtaggaagcagtggaggagctgcaggagcaagtggaggtggttctgcgggggagtca
agaggagctggaggagccatgggccaggcttgccttgaaccccagaggagccgtacccta
aagaggcctcctccgatggagcccacacccatggaagtaccctctcccagggaggtgcaa
cagtggcagccaggaactgcctctacccttccacacagggatgtccgggacaggggggag
gcccggggtgaggtccgaggagaggcccccccctcaggagatttagcccaagcacaggct
gccaagctcagcacctcacaggagtcactgctggattccagaggacacctgaaacagagc
aacaacccgtatgccaagtcttacactctggtataa
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integrated database retrieval system
