Cyprinodon tularosa (White Sands pupfish): 119783890
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Entry
119783890 CDS
T07496
Symbol
prpf40a
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119783890 (prpf40a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ctul03041
]
119783890 (prpf40a)
Spliceosome [BR:
ctul03041
]
Complex A
U1 snRNP components
U1 related factors
119783890 (prpf40a)
Complex B
119783890 (prpf40a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
Motif
Other DBs
NCBI-GeneID:
119783890
NCBI-ProteinID:
XP_038141546
LinkDB
All DBs
Position
Unknown
AA seq
883 aa
AA seq
DB search
MSSTETNNGPNQAAPYAAVPPAAIPPPYMGPPGIPPHFPPMGIPPMAQRPPSMTPMPPGI
MPPGIMPPMAAPPMAQMPSMIPPMIPGMMLPPRIPAATVQPTGPPGVDSTVPTAAAPGTT
SATNVSQPEEQPKKKSVWTEHKSLDGKTYYYNTETKQSTWEKPDELKSPAEQMLSKCPWK
EYKSDTGKPYYYNSQTKESRWTKPKELEDLEAMIKAEESGTTETTAPGTTAAPAVQADKI
TVTTATVKEVEVSAAVPEEQPSQVTVHQAAEVKAVEAPVTSTESPVVTESKPSVEVKEEE
RPELQKKTYKWNTKEEAKQAFKELLKEKGVSSNSSWEQAMKLIINDPRYSALPKLSEKKQ
AFNAYKVQTEKEEKEEARIKYKESKEKFQRFLENHEKMTSTTRYKKAEQMFSELEVWSCV
PERDRLEIYEDVLFYLAKKEKEQAKQLRKRNWEALKNILDNMANVTYRTTWSEAQQYLLD
NPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEDKQKTLLRERRRQRKNRESFQKFLD
ELHDHGQLHSMSSWMEMYPTLSSDMRFSSMLGQPGSTPLDLFKFYVEDLKARYHDEKRII
KDILKDKGFLVEVNTSFDDFGSVISSDKRATTLDAGNIKLAFNSLLEKAEAREREREKEE
ARKMKRKEAAFKAMLKQATPPLEPETTWEEARERFLKEAAFEDVTLESERKRIFKDFMHV
LEHECQHHHSKTKKHSKKSKKHHRKRSRSRSASESEDEEYHKKKKRSQSKSPSERSSSGE
SERSYKKSKKHKKKGKKRRHKSASPDSEGEKKGKERDGKRERDSEKDKENDKSRGKSRSE
SKQKSPKRKAAKEEGGWDTSGSELSEGELEKRRRTLLEQLDAP
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgacggagacaaataatggcccgaaccaagcggcaccttacgcagcagttccc
cctgcagcgataccgcctccatatatgggaccaccaggaataccacctcacttcccaccc
atgggaataccccctatggcacagcggcctcccagcatgactccaatgccacctggaatc
atgccaccaggcataatgcctccaatggctgctccaccaatggcacagatgccaagcatg
ataccacccatgataccgggaatgatgctaccccctcgtattccagctgcaactgtgcaa
ccgacaggacctcctggtgtcgactcgacagtccctacagcagctgctcctggaacaacg
agtgcaacaaatgtctctcaaccggaagaacaaccaaagaagaaatctgtgtggacagag
cacaaatctttggatgggaaaacttattattacaacacagagaccaaacaatccacatgg
gagaagccagatgaactgaaatctcctgcagagcaaatgctgtctaaatgcccctggaaa
gagtacaaatctgacacaggaaagccttattattacaactctcagacaaaggagtccaga
tggaccaaacccaaagagttggaggatctggaagctatgatcaaggcagaggagagtggg
acaacagagacaacagcccctggaaccactgcagctcctgcagtgcaagctgataaaatt
acagtcactacggcgacggtaaaggaggtggaagtttctgcagcagtcccagaggagcag
ccgtcccaggtgaccgtgcatcaagcagctgaggtcaaggctgtagaggcacctgtgact
tccacagagagtccagtcgtcacagagagtaaacccagtgttgaagtcaaagaagaagaa
cgacctgaacttcagaagaaaacgtataagtggaacacaaaagaagaagctaagcaggcc
tttaaagagctgctgaaggagaagggtgtttcatcaaactcctcctgggaacaggccatg
aaactgattatcaatgatcctcgctacagtgcacttcccaaactgagcgagaagaaacag
gcgttcaatgcctacaaagtccaaaccgagaaggaggaaaaggaagaggcaagaataaag
tacaaggagtccaaagagaagttccagagattcttggagaaccacgagaagatgacgtcc
accaccagatacaagaaagcagagcaaatgttcagtgagctggaagtttggagctgcgtt
cctgagagagaccggctggagatctatgaggatgtgttgttctacctggctaaaaaggag
aaggaacaagccaaacagctgaggaagaggaactgggaagctctgaagaacattttggac
aacatggctaatgtgacctatcgcaccacctggtctgaggcccagcagtatctgcttgat
aaccctacatttgctgaggacgaggagctgcagaatatggataaagaagacgccctcatc
tgttttgaagagcacatccgtgctctggagaaggaggaggaggaagacaagcagaagact
cttctcagggaaagaagacggcagcgtaaaaacagagagtccttccagaaatttctggat
gagctccacgatcatggtcagctccactccatgtcctcctggatggagatgtacccgacc
ctgagctctgacatgcgcttcagcagcatgctgggccagcctggttctactcctttggac
cttttcaaattctatgtggaagacttgaaggcccgttatcacgatgaaaagagaattatc
aaagacatcctgaaggataaaggcttcctggtggaagtgaacaccagctttgatgacttt
ggatccgtcatcagctccgacaagagagccactactctggatgctggaaacataaagctg
gccttcaacagtttactggagaaggcggaggccagagagagggagcgagagaaagaggaa
gcccggaagatgaagaggaaagaagcagcgttcaaagctatgctgaagcaggcgacaccc
ccgctggagccagagaccacatgggaggaagccagagaaagattcctgaaagaagccgca
ttcgaagatgtgacgctggagtcggagcggaaaaggatatttaaagatttcatgcatgtc
ctggagcatgaatgccagcatcaccactccaagacaaagaagcattcaaagaagtcaaag
aaacaccatcgcaagcgatcccgctctcgatcagcttcagagtcagaggatgaggagtac
cacaagaaaaagaagaggtcgcagtccaaatctccctctgagcgttcttctagtggagaa
tctgagagaagctataaaaaatccaagaaacacaagaagaagggcaagaagaggcgccac
aaatctgcctcaccggactctgaaggcgagaagaaaggaaaagagcgtgacgggaagaga
gaacgggattcagagaaggataaagagaacgacaagagtcgggggaaatctcgctctgag
tctaaacagaaatctcctaaaagaaaagcagccaaagaggagggtggctgggacacatcg
ggcagcgagctgagcgagggagagctggagaagagaagaagaactttactggaacaactg
gatgcaccttga
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