Cyprinodon tularosa (White Sands pupfish): 119784061
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Entry
119784061 CDS
T07496
Symbol
vars2
Name
(RefSeq) valine--tRNA ligase, mitochondrial isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
119784061 (vars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ctul01007
]
119784061 (vars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ctul03016
]
119784061 (vars2)
Enzymes [BR:
ctul01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
119784061 (vars2)
Amino acid related enzymes [BR:
ctul01007
]
Aminoacyl-tRNA synthetase
Class I (U)
119784061 (vars2)
Transfer RNA biogenesis [BR:
ctul03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
119784061 (vars2)
Prokaryotic type
119784061 (vars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1_2
tRNA-synt_1g
Val_tRNA-synt_C
Motif
Other DBs
NCBI-GeneID:
119784061
NCBI-ProteinID:
XP_038141847
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MSVPGYENQVEFGTMFTFAYPVEGHADGEVAVSTTRPETMLGDVAIAVHPDDPRYQALHG
RRCRHPFTNRLLPIITDSVVDMELGTGAVKVTPAHDFVDFHLSQRHSLPRPSVIGGDGTM
EPLCGAWLEGVKRFDARQLVVDALVEKKLFRGKKNHAMSLPICSRSGDIIEPLLKKQWFV
RCNTMAQKAIQAVEDGQLEIIPHHYTKTWKNWLSNISDWCISRQLLWGHRIPAYQVELPD
STPKEQELWVWGRSEAEARQRAAVKYGLNPEDITMRQDPDVLDTWFSSALFPFAMLGWPE
KTSDLQHFYPNSVLETGSDLIFFWVARMVMLGSELTGQLPFKQVLFHSLVRDKYGRKMSK
SLGNVIDPLDVIHGVSLKRLEEKVKEGNLDPREQLVAMEAQRKDYPNGIPPCGTDALRFA
LCSHRMQGEDISLSVSQVLSCRHFCNKMWQTLRFTLGVLGDKTMPVETLEKTAPLGSMER
WICSRLYSTVLQCEEAFEAYELHLVTSALYSFWVHNLCDVYLEYIKPVLLKDDGGAEVPA
DRSSKQVASAVLYHCVSSSLALLSPFMPFITEELWQRLQPFRPEAQAQASLCLQPYPTSR
HLTHWYFPEVERDFLLVQDIIRTARSLRAQCGLTKEKPVMWAVCSPSQAQTLLRFDSALL
TLSRISSLQIYCPDQGGSPPSVHSTPPPTGCFIGVVDHTCQLHLHIRSGVDTDKQIQHLS
QRREKLLPKLEENLGRLQCPNSRTKIPAHIREQLQSKVSALKEELKTVEDQIKVLQEKQS
AG
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtccctggatatgagaaccaggtggagtttgggacgatgttcacctttgcgtat
cctgtagaaggtcatgcagacggtgaagtggcagtgtccaccactcgtcctgagactatg
cttggagatgtggccatcgctgttcatcctgatgatcctcgataccaggctctccatgga
cggcggtgtcggcaccctttcaccaacagactccttcctatcattactgactctgtggtg
gacatggagctgggaacaggtgctgtgaaggtgactcctgctcatgacttcgtagacttc
catctgtctcagaggcactctctgccgcggccctccgtcatcggaggcgatgggacgatg
gagccgctgtgcggagcgtggctggagggcgtgaagcggttcgatgccaggcagctggtt
gttgacgctcttgttgaaaagaaacttttccgagggaagaagaatcacgcgatgtcttta
cccatctgcagccgctctggagacatcattgaacctcttttaaaaaagcagtggtttgtt
cgctgcaatacaatggctcagaaagccatacaggctgtggaggacggacagctggaaatc
attcctcatcattacaccaagacgtggaagaactggctgtccaacatcagtgactggtgc
atttccaggcagcttttatggggtcatcggatcccagcttaccaagtagagcttcccgac
tccacacctaaagaacaggagctgtgggtctggggccgaagtgaggcggaggccagacag
agagccgctgtgaaatatggattaaacccagaggacatcactatgcgacaggacccagat
gttctggacacctggttctcctcggcgttgtttccgttcgccatgctgggctggccagaa
aagacctctgacctccagcacttctaccctaactctgttctggagaccggcagtgacctc
atcttcttctgggtggccaggatggtgatgctggggtccgagctgactggacagctcccg
tttaaacaggttctgtttcactccctggtgcgggacaaatatggcaggaagatgagtaaa
tctctgggaaatgttatcgaccctttagatgtcatacatggcgtctctctgaagagactc
gaggagaaagtgaaggagggaaacctggacccaagggagcagttggttgccatggaagcg
cagaggaaagactaccctaatggaatacctccatgtgggactgacgctctgagattcgct
ctttgctctcacaggatgcagggtgaagacatcagtttgtccgtatctcaagttctcagc
tgcaggcacttctgtaataaaatgtggcagaccctcagattcactttgggagttctgggt
gataaaacgatgccagtggaaacacttgaaaagacggctcctctgggcagcatggagcgc
tggatctgttcccgcctctacagcacggtgctgcagtgcgaggaggcgtttgaagcttac
gagctgcatctcgtcacctccgccctgtattctttctgggtgcacaacctgtgtgacgtt
tacttggaatacataaagcctgtgctgctgaaagacgacgggggggcggaggtcccagct
gacaggagcagcaagcaggtggccagcgccgttctctatcactgcgtgtcttcgtctctc
gctctgctctctcccttcatgcctttcatcaccgaggagctgtggcagagactccaaccg
ttcagacctgaagcccaggcccaggccagcctgtgtttgcagccttatcccacatcccgc
catctgacacactggtatttccctgaggtggagagggacttcctgctggtccaggacatt
atccgaacagctcgatctctgcgagcccagtgtggcctgaccaaagagaaacctgtcatg
tgggcagtgtgttcgcccagccaggcgcagacgctcctccgctttgattcagctcttctg
actttaagtcggatctcaagcctccagatctactgtccagatcaaggaggttctcccccc
tctgtccactccacacctccacccactggatgcttcatcggcgtggtagaccacacctgt
cagctgcaccttcacatccgaagtggagtcgatactgacaagcagattcagcatctttct
cagcgaagagagaagcttcttccaaagctggaggagaatcttggcaggctgcagtgtccc
aacagtcggacgaagattccagcacacatcagggagcagctgcaaagcaaggtttcagct
ttgaaggaggaactaaaaactgttgaggatcagataaaagtgctgcaggagaagcagtca
gcgggataa
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