Cyprinodon tularosa (White Sands pupfish): 119784262
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Entry
119784262 CDS
T07496
Symbol
mnat1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1 isoform X1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03022
Basal transcription factors
ctul03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119784262 (mnat1)
09124 Replication and repair
03420 Nucleotide excision repair
119784262 (mnat1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctul03021
]
119784262 (mnat1)
03400 DNA repair and recombination proteins [BR:
ctul03400
]
119784262 (mnat1)
Transcription machinery [BR:
ctul03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
119784262 (mnat1)
DNA repair and recombination proteins [BR:
ctul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
119784262 (mnat1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
zf-C3HC4
TRAF3_RING
zf-UDP
zf-RING_2
zf-P11
Motif
Other DBs
NCBI-GeneID:
119784262
NCBI-ProteinID:
XP_038142159
LinkDB
All DBs
Position
Unknown
AA seq
311 aa
AA seq
DB search
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCENCVEMLFVRGSGNCVQCDTPLRKSNFRV
QLFEDASVDKEVEIRKKVMKIYNKREFDFSSLRDYNDYLEQVEDIVYNLTNNIDVENTKL
RMEQYQRENKDIIQRNKAKLTREQEELEELLLLEQQSNEQRRLEVLQEEKRQLQAKRKSK
QALLDELEQSQLPATILLAQHKVRAAQLETQIEQQKQNVKPTSLFSTGIQIGQTVSLQPL
PRIQEVLYQYKPLQVETYGPPAPDLEQLSRFGYLNHVRTAMPQDTAGGYTSALACYRAIQ
DAFSGLFPLKG
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccaaggttgtccgagatgcaaaaccaccaagtaccgcaacccgtccctgaag
ctgatggtgaacgtctgcggccacacgctatgcgagaactgtgtggaaatgctgtttgtg
cgtggctcggggaactgcgtgcagtgcgacacgcctctgaggaagagcaactttcgcgtg
cagctcttcgaagatgcttcagtggacaaggaagtagagatccgcaagaaggtgatgaaa
atctataataagagagaattcgacttctccagcctgagagactataacgactatctggag
caggtggaggacatagtttacaacctaacaaacaacattgatgtggagaacaccaagctg
aggatggagcagtaccagagggaaaacaaagacatcatccagaggaataaggccaagcta
acgcgggagcaggaagagctggaggagctgctgcttctggagcagcagagcaacgagcag
cggcggctggaggtgctgcaggaggagaagaggcagctgcaggccaagaggaagagcaaa
caggctctgctggatgaactggaacagtctcagcttcctgccaccatcttattggctcag
cacaaagttcgtgctgcccagctggagacgcagatagagcagcaaaaacagaatgtgaag
ccgaccagtttgttttcaactggaatccaaataggtcagactgtctctctccagcctttg
cccaggatacaggaagttctgtaccagtataaacccctccaggttgaaacttatggaccc
ccagcaccagacctggagcagctcagcagatttgggtatctgaaccacgtcaggacagcg
atgccccaggacactgctggaggatacacctcagctctggcgtgttatcgagccatccag
gatgcttttagtgggcttttccctctgaaaggctga
DBGET
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