Cyprinodon tularosa (White Sands pupfish): 119784284
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Entry
119784284 CDS
T07496
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04137
Mitophagy - animal
ctul04140
Autophagy - animal
ctul04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119784284 (hif1aa)
04137 Mitophagy - animal
119784284 (hif1aa)
04148 Efferocytosis
119784284 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctul03000
]
119784284 (hif1aa)
Transcription factors [BR:
ctul03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
119784284 (hif1aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
DDRGK
PAS_2
Motif
Other DBs
NCBI-GeneID:
119784284
NCBI-ProteinID:
XP_038142188
LinkDB
All DBs
Position
Unknown
AA seq
752 aa
AA seq
DB search
MDTVIIPEKKRVSSERRKEKSRDAARCRRGKESEVFYELAKQLPLPQSTSSSLDKASIMR
LTISYLRMRKLLCIDELVAEEKTELDEQLNGSYLKALDGFLIVLSEDGDMIYISENVNRC
LGLAQFDLIGHSVFDFTHPCDQEELREMLVYRSGSKKVKEPSTERNFFLRMKCTLTSRGR
TVNVKSATWKVLHCSGHVRVHSSEQSADGPKEPPVPYLVLICDPIPHPSNIEVPLDTKTF
LSRHTMDMKFTYCDERITELIGYDTEDLLNRSVYEYYHALDSDYLTKTHHHLFTKGQVTT
GQYRMLAKRGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGIQEDKLILSLEQTEGVEP
VKEQQQGEEESAAEANEALKVKEEEEEEKTPELDVIKLLTEVEIQPKDCLYNLLKGHPDA
LTLLAPAAGDTIISLDFSRSGAESETHLLKDVPLYNDIMMPSSDDKLTLPMSPLSPTEPL
DASNSASEEAKPDSFVPTLLTTPPNKPSEVDNPLGFSFPMETEMNSDFKLDLVEKLFAVD
LDSKTPFNTEAMEDSELEMFAPYISMEDDFQLPCLSPGEPLPCGPCKPPDSSPVLVPLDV
RSYPSSPFSAPESRTASPAPPESVCTPPAATITAKKAPKPEQEIPLRTLAVQNVQRKRKL
SELKEIIEQGSVTQEPEKVKKLKATEMVAARTVLLLPSDLASRLLGTTSDVSSSPFTLPH
LTSYDCEVNAPLQGRQYLLQGEELLRALDHIN
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggacacagtgatcatacctgaaaagaaaagggtgagttcggagcgcagaaaggagaag
tcaagggatgcagcgagatgccggcgcgggaaggagtcggaggtgttctacgagctggcc
aagcagctgcccctcccccaaagcaccagctccagcctggacaaggcgtccatcatgagg
ctgaccatcagttacctgcgcatgcgcaaactgctctgcattgatgagctggtggcagaa
gagaaaaccgaactcgatgagcagctgaatggctcctacctgaaggctttagatggcttt
ctcattgtgctgtctgaagatggagatatgatctatatctcagaaaatgtcaacaggtgc
ctcgggctggcgcagtttgacctgatcggacacagtgtgtttgactttactcatccctgc
gaccaggaggagctgagggagatgctggtctacagatcagggtccaagaaagtcaaggaa
ccgagcacagagcggaacttcttcctgcggatgaaatgcaccctcaccagcagagggcgc
accgttaatgtgaagtcagccacatggaaggtgctgcattgctcgggtcacgttcgtgtt
cacagcagtgagcagagcgccgacggccccaaggagccacccgtcccctatctggtcctg
atctgtgaccccatcccccacccttccaacatcgaggtccctctggacaccaagaccttc
cttagccgccacaccatggacatgaagttcacctactgtgatgagaggatcaccgagctc
atcggttatgatacagaagacctgctgaaccgttctgtgtatgaatactaccatgctctg
gactcagactacctgacaaagactcaccatcacctttttacgaagggccaggtcaccaca
ggtcagtaccggatgctggctaaaagaggcggctttgtgtgggtggaaacacaggctact
gttatctacaacaacaagaactcccagcctcagtgtgttgtgtgcgtcaactttgtgctc
agcgggatccaggaggacaaattgatcctgtctttggagcagactgagggcgtggagcct
gtgaaggagcagcagcagggtgaagaagaatcagcagcagaggcaaacgaggctttgaag
gtgaaggaagaggaggaggaggagaagactccagagctggatgtgataaagctcttgacg
gaggtggagatccagccgaaggactgtctgtacaacctgctgaaaggacaccctgatgcc
ctgaccctgctggccccggcagccggggacacaatcatctccctggatttcagccgctcc
ggtgcagaatcagagacccacctgctgaaagatgtccctctctacaatgacataatgatg
ccgtcctcggatgacaagctgacgctgcccatgtctcctctgtcgcccactgaaccgctg
gacgcctccaacagcgcatctgaggaggccaaacctgacagctttgttcccaccctcctg
actacaccacccaacaaaccttcagaagtcgacaatcctctgggcttttctttccccatg
gaaacagaaatgaactcggactttaaactcgacctggtggagaagctgtttgccgtcgac
ctagattccaaaactcccttcaacacagaggcgatggaggactcagaactggagatgttt
gcaccatacatctccatggaggatgacttccagctgccctgcctctcccctggagagcct
ctgccttgtggaccatgcaaacccccggacagctccccggtcctcgtcccgctggacgtc
cgcagctatcccagctctccgttcagcgcaccagagagccgcacggcttccccagctcca
cccgagtccgtctgcacgcctcctgctgccaccatcactgcaaaaaaagccccaaagccg
gagcaggagatccctctcagaactctcgctgttcagaatgtgcagcgtaaacgaaaactg
agcgaactgaaggagatcattgaacagggatctgtgacccaagaacctgagaaggttaaa
aagctgaaggcgacagagatggtagcagccaggaccgttctcctcctgccttcagatttg
gccagcagattgcttggaaccacatctgatgtgagcagctcccccttcacgctgccacac
ctcaccagctacgactgcgaggtaaacgcccccctacagggccgccagtacctgttgcag
ggggaggagctgctgcgcgctctggaccacatcaactga
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