Cyprinodon tularosa (White Sands pupfish): 119784483
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Entry
119784483 CDS
T07496
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119784483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ctul04121
]
119784483
Enzymes [BR:
ctul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119784483
Ubiquitin system [BR:
ctul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119784483
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
Ig_DSCAM-DSCAML_C
PRY
zf-C3HC4_3
zf-RING_2
Pur_ac_phosph_N
zf-C3HC4_2
zf-RING_5
ZNF512_C2HC
NDNF
Motif
Other DBs
NCBI-GeneID:
119784483
NCBI-ProteinID:
XP_038142508
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MDTLESELTCPICLELFEDPLLLPCAHSLCFGCAHRILVSHCATNESVQNIGAFQCPTCR
YVISLSPERGLEGLKRNVTLQNIIDRVQRASSSAGLPLPLPLAGPHSGPNSPSEEGSNRL
ALVPVSAAMSSPETAPEPVQCQFCEQDPPQDAVKTCVTCEVSYCEECLRATHPNKKPFTG
HRLIEPMPDSHLRGLQCLEHEEEKVNMYCVIDDQLICSLCKLVGRHRDHQVAALSDRYEK
LKQALDSNLSNLIKRNNELESLMGKLIQTCQHVEVNASRQEGKLLEECDVLIDIIQQRRQ
IIGSKIKEGKAQRLRKLAQQISNCKQCIERSSALITQADQTLKETDHARFLQTAKSINER
VSMATASTQVLIPEIHLTDTFDTFALDFTREKKLLENLDYLTAPSAPCIREELCTASYDT
ISVHWTSDDEFTVVSYELQYAIFTGQSNIASLCNSLESWMIVPNIKQNHYTVHGLQSGTK
YIFVVKAINQAGSRSSEPGTLKTNSQPFKLDPKSAHKKLKVSHDNLTVERDETTSKKGHS
QDRFSSQSSYGVVGNVYIDSGRHYWEALIGGSTWYAIGIAYKSAPKHEWIGKNSASWVLC
RCNNSWVVRHNSKELAIEPSPHLRRVGILLDYDAGYISFYDAVGSQHLHTFHVSFVQPVC
PVFNVWNKCLTILTGLPIPDHLEGLESSN
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggacactctggagtcagagctgacctgcccaatctgcctggagctcttcgaagaccca
ctgctgctcccttgtgctcacagcctgtgctttggttgtgcccaccgtatcctcgtctcc
cattgcgccactaacgagtccgtccagaatattggtgcttttcagtgccccacttgtagg
tatgtaatttccctgagtccagagcgtggattagagggactcaaaagaaacgtgactttg
cagaacatcatcgacagagttcagagggcttcttcctcagctgggcttcctctaccgctg
ccattggccggcccccacagtgggcctaactctcccagcgaggaagggagcaatcggctg
gctttggttcctgtcagtgccgccatgtccagcccggaaactgccccggaaccagtccaa
tgccaattctgtgagcaggacccacctcaggatgccgttaagacatgcgtgacatgtgaa
gtttcttactgcgaagaatgcctcagagcaactcacccaaacaagaagccattcaccggt
caccggcttattgagcctatgcccgattcccacctcagaggactccagtgcctggagcat
gaggaggaaaaggtgaacatgtactgtgtcatagatgatcagctgatatgctcactgtgc
aaactggtgggaaggcacagggatcaccaagtggcagctctaagtgaccgctacgaaaaa
ctaaagcaagccctcgactcaaacctgagcaacttgattaagaggaacaacgaactagag
tcgcttatggggaaactgatccagacttgtcagcatgttgaggttaatgcgtcacgccag
gagggcaagctcttggaggagtgcgacgtcttaattgacatcattcagcagaggaggcag
atcattggcagcaagattaaagaggggaaggcacaaaggctacggaagctggcccagcag
atttccaactgtaagcagtgcatcgagaggtcctcagcgctcatcacacaagccgatcaa
accctgaaagaaacggaccacgcacgcttcctacagactgccaaaagcatcaatgaaagg
gtttccatggcaacagcatcaacccaggtgctgattcccgagatccatttgacagacacg
tttgacacgtttgccctcgactttactagagagaagaagttgctggaaaatctggattac
ctcacagctccaagtgctccgtgcataagggaagagctgtgcacagcttcatacgacacc
atcagtgtccactggacgtctgatgatgaattcacagtcgtgtcctacgagctccagtat
gccatcttcaccggacagtccaacattgccagtctatgcaactcattggaaagttggatg
attgttcccaacattaaacagaaccattacacagtgcatggtttgcagagtggaactaag
tatatctttgtggtgaaagccattaatcaagcaggaagcaggagcagtgaacccgggact
ctgaaaacaaacagccaaccgttcaaactggatccaaaatctgctcataagaagctcaaa
gtttcccatgataacctaacagtggaacgcgatgaaaccacatccaagaagggccatagc
caggatcggttctccagccagagcagctatggcgtggtgggaaatgtctacatcgacagt
ggacgtcattactgggaggctctgattggagggagcacatggtacgctataggtattgca
tacaagtcggcacccaagcacgagtggatcggcaagaattctgcctcttgggtgctctgc
cgctgtaacaactcatgggtggttcgccacaacagcaaggagctggccatagaaccctcc
ccccacctccgacgggtagggatcctgttggattacgacgccggatacatttctttctat
gatgccgtcggctctcagcacctacatacctttcatgtgtcttttgtccagccagtgtgt
cctgtgtttaatgtatggaataagtgtctgacgatactcacaggtctacctatccctgac
catctagagggactagaatcaagcaactga
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