Cyprinodon tularosa (White Sands pupfish): 119784507
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Entry
119784507 CDS
T07496
Symbol
si:ch211-114c17.1
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ctul03041
]
119784507 (si:ch211-114c17.1)
Spliceosome [BR:
ctul03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
119784507 (si:ch211-114c17.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
TPR_11
TPR_12
HrpB1_HrpK
HAT
TPR_16
GAT
Motif
Other DBs
NCBI-GeneID:
119784507
NCBI-ProteinID:
XP_038142510
LinkDB
All DBs
Position
Unknown
AA seq
739 aa
AA seq
DB search
MAAEGCDEMSGNGMPEETSAMDVTEVAPPLPPPPPPPPPEVTEENGGSTDAPEASATPEN
CPTAPTGTNKEGELPADFERLWKAAHNNPQDFTSWTDLLQYSEQEGHVVAYRRALEAFLV
RYPLCYGYWKKFTDLERRAADNNKAEEVCIRGLQVIPLSVDLWIHYINLLLGTLDMNLPD
SAVRIRSVFENAVAACGLDFHSDRLWVLYMEWEKEHGNLRNATAVMDRVLRVPTQRYNTH
YEMFKEHLNSHPPKDVLSSDEYEELRALCRQSQKAERAEQSQEEEEERPPGEEEPTTPEG
ADSEELIQKIREQVLLRRDKVYQDNEEEVRKRWNYEDAIKRPYFHVRPLDRVQLRAWHTY
LDWEIAELNRDTRDPAQGDNTHDPNQESTEESEIPTQRPEASDDSATALQGDLRVRILFE
RCLIACALYEEFWTRYIQYLEPQSVGEARAVYRRACEVHLPNKPNIHMQWATFEERHGNL
TEARRILEALEKSVPGLAVVRIRRAALERRAGQLEQSEALLREAVAESKERPTLHAFYSI
KLARLLLKVVRNSDGARRVLQEALEISPDNEKLHLNLLDLELSGDPWASAEAVNECVTRA
LEAPLTSQTKLLLSQRGLQFTEEYSNSVQRVLSVYDVHQKLLDELGGTKREAENGDEDPE
KISKTDDGSSTAAQTASSMSQVPSSTAVAGTDASAQAGYGAYSSWYQQPGYGSYGNYSNY
GSYGYQNTWNYNQTYYPPS
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagggctgcgatgagatgagcggtaacgggatgcctgaggagacttcagct
atggatgtcactgaggtggctccaccactgcccccaccgccgccgcctcctcctcctgaa
gtcacagaagagaatggcggctcgactgatgcccctgaggcttctgcaacccctgaaaac
tgccccacagctccaacaggaacaaataaggaaggcgaactacctgcagactttgagcgt
ctgtggaaagctgcgcacaacaatcctcaagacttcaccagctggaccgatctgctccag
tactctgagcaggagggtcatgttgtagcgtaccgtagagcactggaggccttcctcgtt
cggtatccactctgctacggctactggaagaaatttacagacttggagcgccgtgccgca
gacaacaacaaagcagaagaggtgtgtattcgtgggcttcaagttattcctttgagtgta
gatctttggatccactacatcaatctattgctgggaacattagacatgaacctgcccgac
tcagctgtacggattcgcagtgtgttcgagaacgccgttgctgcgtgcggtttggatttc
cattcggatcgtctgtgggttctctacatggagtgggaaaaagagcacggaaacctgagg
aacgccacggccgtcatggacagagtcctcagagttcctactcagcgctacaacacacac
tacgaaatgttcaaagagcacctgaacagccacccgcctaaagacgtgctctcctctgac
gagtacgaggagctgagggcgctctgccggcagagccagaaggcagagcgggctgaacag
tctcaggaggaggaggaggagcggccgccaggagaggaagagcccactacacctgagggc
gcagactctgaggagctgattcaaaagataagggagcaggtgctgctccgaagggacaaa
gtttaccaagacaatgaggaagaggtccggaagagatggaactatgaagatgctatcaag
cgtccttatttccacgtcaggccactggaccgcgtccagctccgagcttggcacacctac
ctggactgggagatcgctgagctaaacagggacaccagagaccccgcacaaggcgacaac
acgcatgaccctaaccaggaatcaacagaggaatctgagattccaacccagcgtccggaa
gcatcagatgattctgctacagccttgcagggtgacctcagagtccgcattctttttgag
cgctgcctgatcgcctgcgcactgtatgaggagttctggaccaggtacattcagtacctg
gagccgcagagtgtgggcgaggcacgggccgtctacaggcgagcctgtgaggtccacctc
cctaacaaacctaatatccatatgcagtgggccacctttgaggagaggcatggtaatcta
accgaggcccggcgcatactggaggccctggagaaatcagttcctggtctggctgttgtg
cggatccgcagggcagctttagaacgacgagcagggcagctggagcagtcggaggctctg
ctgcgagaggcagtggctgaatccaaagagaggccgacgctgcacgctttctactccatc
aaactggctcgtctgctgcttaaagtggtccgaaactctgacggcgcccgcagggtttta
caggaagccctggaaataagcccggataatgaaaagctacacttgaacctgttggacctg
gagttgtctggggacccctgggcttcagccgaggcggtgaacgagtgcgtgactcgagcc
ctggaggctcctctcacctcacaaaccaagttgcttctgtcacagagaggcctgcagttc
acagaggaatacagcaactctgttcaaagggtgctgtccgtctatgacgtgcatcagaag
ctgctggacgagctgggaggaacaaagagggaggcagagaacggggacgaggatccagag
aaaataagcaaaacagacgacggctcttccacagctgcacagacggcatccagcatgtcc
caggtgcccagtagcacggcggtggcgggcaccgacgccagcgcacaggccggatatgga
gcatacagcagctggtaccagcaaccaggctatggcagctacggtaactatagcaactac
ggcagctatggctaccagaacacctggaactacaatcagacctactatccgcccagttaa
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