Cyprinodon tularosa (White Sands pupfish): 119784566
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Entry
119784566 CDS
T07496
Symbol
polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03020
RNA polymerase
ctul03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119784566 (polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
119784566 (polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctul03021
]
119784566 (polr2b)
03400 DNA repair and recombination proteins [BR:
ctul03400
]
119784566 (polr2b)
Enzymes [BR:
ctul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119784566 (polr2b)
Transcription machinery [BR:
ctul03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
119784566 (polr2b)
DNA repair and recombination proteins [BR:
ctul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
119784566 (polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
119784566
NCBI-ProteinID:
XP_038142596
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYDQDEDNQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHTSGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLSGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSMM
ARGGQGVKKSAIGQRIVSTLPYIRQEVPIIIVFRALGFVSDRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDVKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKRRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEIFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGEDVIIGKTVTLPENEDELDSTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTVGHLIECLQGKVSANKGEIGDATPFNDAVNVQKVSNLLSEYGY
HLRGNEVLYNGFTGRKLTSQIFIGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMTS
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaccaggacgaagataaccagtatgatgaagatgatgatgaaatcacccctgat
ctgtggcaggaagcctgttggatcgtcatcagctcttattttgacgagaagggcctggtg
cggcagcagctggattcgttcgatgagttcatccagatgtctgttcagaggatcgtggag
gatgctccacccattgatctccaggctgaggcccagcacacttcaggggaggtggaggag
ccgcctcggtacctgctgaagtttgagcagatctacctgtccaaacccacccactgggag
agggatggagctccgtctccaatgatgcccaacgaagctcgactgaggaacctaacgtac
tctgccccactttatgttgacatcacaaagaccataataaaggagggcgaggaccagctg
cagacgcagcaccagaaaacttttattggtaaaattcccatcatgctccgctccacctat
tgccttctgagcggcctgaccgacagagacctgtgtgagctcaacgagtgtccgctggac
cctggaggttatttcatcatcaacggctctgagaaggtgctgattgcgcaggagaagatg
gccaccaatacagtttacgtttttgccaagaaggactccaagtacgcttacacaggcgaa
tgtcggtcctgcttggagaactcatcccgtcccaccagcaccatctgggtcagcatgatg
gcccgaggagggcagggagtgaagaaaagcgccatcgggcagaggatcgtgtccacgctg
ccgtacatcagacaggaggttcccatcatcatcgtgtttcgagcgttgggcttcgtgtcc
gacagagacatcctggaacacatcatctatgactttgacgaccctgagatgatggagatg
gtgaagccatctttggacgaagccttcgtgatccaggagcagaatgtggcgctgaacttc
atcgggtccagaggagccaaacctggagtgacgaaggagcggcgaatcaagtacgccaaa
gaagttctgcagaaagagatgctgccgcacgtcggagtcagcgacttctgtgagaccaag
aaggcctacttcttagggtacatggtccaccggctgctcctcgctgctcttggtcggagg
gagctagatgacagggatcactatggaaacaagaggctggatctggccggacccctgctg
gccttcctgttcagagggatgtttaagaatctgctgaaagagatccgcatctatgcccag
aagttcatcgatcgagggaaagactttaacctggaactcgccatcaaaactcgcatcatc
tccgatgggctaaagtactctctggccactggaaactggggcgacgtgaagaaagcccat
caggctcgagcaggcgtgtcccaggtgttgaaccggctcacctttgcctccacgctgtct
caccttcgcagagtcaactcgcccatcggcagggacggaaaactggccaagcctcgacag
ctgcacaacaccctgtgggggatggtgtgtcctgctgagacccccgagggccatgcagtg
ggtctggtgaagaacctggccctgatggcctacatctctgtgggctcacagccttctccc
atcctggagtttctggaggagtggagtatggagaacctggaggagatctcccctgctgcc
atagcagatgccactaagatctttgtcaacggctgctgggttggaatccacaaagatcca
gaacagctgatgaacactttgaggaaactccgcagacagatggacatcatcgtttcagag
gtgtcaatgatccgagacattagagaacgagagatcaggatctatactgacgctggaagg
atctgtagaccgctgcttattgtggagaaacagaaactcctgctgaagaggagacacatc
gaccagttaaaggagcgggaatacaacaactacagctggcaggacctggtggcgagcggc
gtggtggagtacatcgataccctggaggaggaaacagtcatgcttgccatgactcctgat
gaccttcaggaaaagggtgtggcctactgctctacatacacccactgtgagatccaccca
tccatgatcctgggagtgtgtgcgtctatcatccccttcccagaccacaaccagtctccc
aggaatacataccagtctgctatgggaaaacaggccatgggcgtctacatcaccaacttc
catgtgagaatggatacgctggctcatgtcttgtactaccctcagaaaccgctggtaacc
acccgatccatggagtacctgcgcttccgggagctgccagcaggaatcaactcaatcgtt
gccattgcctcctatacggggtacaaccaggaggactctgtgatcatgaaccgttcagct
gtggaccgaggcttcttcaggtctgtgttctaccgctcctacaaggagcaggagtccaag
aagggatttgatcaggaggaaatctttgagaagccgacccgtgagacgtgtcagggtatg
agacacgccatctatgacaagctggatgacgacggactcattgcgcctggcgtccgcgtg
tctggagaggacgtgattattggtaagacggtgactctgccagaaaacgaggatgagctc
gacagcaccaaccggcgctacaccaagagggactgcagcaccttcctgaggaccagcgag
accggcattgtggatcaggtcatggtgacgctgaaccaggagggctacaagttctgcaag
atcagggtccgctcagttcggattcctcagatcggagacaagttcgccagccgtcacgga
cagaagggaacctgtgggatccagtacaggcaggaggacatgccgttcacctgtgaaggc
atcacacctgacatcatcatcaatcctcacgccatcccgtccagaatgactgtgggccat
ttgatcgagtgtctgcagggcaaggtgtcggccaacaaaggcgagatcggcgatgccacg
ccgtttaacgacgctgttaacgtgcagaaagtctccaacctgctgtctgagtacggctac
cacctaagaggaaatgaggttctgtacaacggcttcactgggaggaagctgacatctcag
atcttcattggacccacctattatcagcgcctgaagcacatggtggatgataagatccac
tccagggcccgaggccccgtacagatcctgaaccggcagcccatggagggacgttctcgt
gatggcggccttcgttttggagagatggagcgggactgtcaaattgctcatggagcggct
cagttcctcagagagcgtctgtttgaggcgtcagacccttatcaggttcacgtctgcaac
ctgtgtggactgatggccattgccaacaccagaacgcacacttacgagtgtcgggggtgt
cgcaacaagacacagatctctctggtccggatgccgtatgcctgcaagctgcttttccag
gaactgatgtccatgagcattgctcctcgtatgatgacatcataa
DBGET
integrated database retrieval system
