Cyprinodon tularosa (White Sands pupfish): 119784567
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Entry
119784567 CDS
T07496
Symbol
vcam1b
Name
(RefSeq) vascular cell adhesion protein 1b isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119784567 (vcam1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ctul04515
]
119784567 (vcam1b)
04090 CD molecules [BR:
ctul04090
]
119784567 (vcam1b)
04091 Lectins [BR:
ctul04091
]
119784567 (vcam1b)
Cell adhesion molecules [BR:
ctul04515
]
Immunoglobulin superfamily
VCAM
119784567 (vcam1b)
CD molecules [BR:
ctul04090
]
Proteins
119784567 (vcam1b)
Lectins [BR:
ctul04091
]
I-type lectins (Siglecs)
119784567 (vcam1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
ICAM1_3_5_D2
C2-set_2
V-set
Ig_4
ICAM_N
Ig_C17orf99
C1-set
C2-set
Motif
Other DBs
NCBI-GeneID:
119784567
NCBI-ProteinID:
XP_038142600
LinkDB
All DBs
Position
Unknown
AA seq
812 aa
AA seq
DB search
MDLLQDHWSFVQLLSVILLMSSWCVQGLRVNVFPRKPLFKLGTLQQVVCQVQECSAVPDI
SWFTVNDRPLLASTATNRTHSVLTFNSVTIQDEGQMACKVTCAGQRAEIRTSVSVYSFPS
DPVITGHDHLRDNVETSLTCQVPHLYPAEDVDFTWLKGNTVLNSTNTQSGSSSVTYTPQK
KDSGGNLTCRVMLKLQGLPSEKRTRETTVHINVLYAPVFRNVSGPMEVMAGSPLTLSCSA
EGNPEPTITWTVGGRFLHSAPAGLFVLSAVELSDAGRYECKAINSEGNQTAAVDVSVLAP
PTMTFLLVNPGEEVVEGQQVNFTCGSEGAPPPTLVLKRKGEELHRTESASVCMFSLPFAV
LEDSALYECEASNQYGSQHTSRFITVRAHPLQVEASPQVSAERGSALTLTCRASGCLHPP
TLSWRRTDRNRTLLQKKKQRDGRSQLHLWNLDLQHQGGYSCEAECDSVIRTREIHVQVYS
FPSDPVLEDPGPVLLGQETEYHCNVFNIFSANQLRFSWLSGNETLMMEMYKSSGSLQNIS
SVLKHQVETVQQVLTCRVELLTVDRDVWKSRRTSIPLQIHYPPRLPSLSISPGDEVLEGQ
QVTFTCRSDGVPPPAVMLRRNGEELLRSDSDSSSSITLSISSALLEESGLYQCEASNQYG
SQFVSSSVTVKAPPRNTTVLILPSAEVKEGQNVTVCCQTISFPPSAVILRKLNNGTELYS
TNGTFLLVNVTSRDSGLYQVNVSNDLGSEIKVFSIRVRAEVRTGVHPGFSIILISAACIA
AGLTAFALVLDYMRRSRKKGFYQLAQSAPPSA
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggacctgctgcaggaccactggagctttgttcagctcctctcagtgatactgctgatg
tcatcgtggtgcgttcagggtctccgtgtcaacgtgtttcccaggaagcctctatttaag
ctcggcacgctccagcaggtggtctgccaggttcaggagtgttcagcagtacctgacatt
tcctggtttaccgtaaacgaccgtcctctgttggcgtccaccgccaccaacaggacccac
tctgttctgacttttaactctgtgacaatacaagacgagggacagatggcatgtaaagtc
acgtgtgcaggacaacgggcagagatccggacctctgtctcagtttactcctttccttca
gaccctgtaatcacaggtcatgaccacctgagagataacgtggagacgtccctcacctgc
caggtcccacacctctaccctgctgaagatgttgatttcacctggcttaaaggaaacaca
gttctgaatagcactaacacacagtcagggtctagctcagtgacttacacgcctcagaaa
aaggactctggggggaacctcacctgccgggtgatgctcaagcttcaaggtctgccatct
gagaagaggacgagagagaccacagtccatataaacgtcctctatgctccggtcttcagg
aatgtatccggccccatggaagtgatggcgggctctccgctgactctcagctgttccgca
gagggaaacccggagccaaccatcacctggacagtaggtggtaggtttctacattctgct
cctgctggtctgtttgtcctgtcggctgtcgaactttctgatgctggacgatacgagtgt
aaagccataaactcagagggaaaccaaactgcagctgtagacgtcagtgttcttgctccg
cctaccatgaccttcctgttggtgaatccaggtgaggaggtggtggaaggtcagcaggtg
aattttacttgtggctccgagggagctccacctcctacactggttctgaagaggaagggg
gaggagcttcacaggactgagtccgcctccgtatgcatgttcagcctcccttttgctgta
ctggaggactctgccctctatgagtgtgaagcctccaatcagtatggctcccagcatacc
tccaggttcatcactgtcagagcccaccctctacaggtggaggccagccctcaggtctca
gcggagcggggctcagcacttacgctgacttgtagggcctcagggtgcctgcaccccccc
actctcagttggagaaggacagaccggaaccgaaccctcctccagaagaagaagcagcgg
gatgggcggtcccagcttcacctgtggaacctggaccttcagcatcagggagggtacagc
tgtgaggccgagtgtgactccgtcattaggaccagggagatccacgtccaggtgtactca
ttcccctctgatcctgttctggaggatcctggtcccgtcctgcttggccaggaaactgaa
tatcactgcaatgtcttcaacattttctcagccaatcagctgaggttctcctggctttca
ggaaatgaaaccctaatgatggagatgtacaagtcctctggttccctgcagaacatctca
tcagtcctaaagcaccaggttgagacggtgcagcaggtcctgacctgtagggtggagctg
ctgacagtggacagagacgtttggaaatccagaaggactagcatccctctgcagatccac
tatcctcccaggttgccctccttgtccatcagtccaggtgatgaggtgctagagggtcag
caggtgacgtttacctgccgttcagatggagttccgccacccgcagtaatgttgaggaga
aatggggaggagcttctgaggagtgactctgattcctcctcctctatcactctcagcatc
tcctccgcccttctagaagagtcgggcctctaccagtgtgaggcctcgaaccagtatggc
tcccagtttgtctccagctctgtcacagtcaaagctcccccgaggaacaccaccgtcctc
atccttccctctgcagaagtcaaggagggacaaaatgtgactgtctgctgccaaacaatc
agcttcccaccatcagctgtgatcctgaggaagctaaacaacggaaccgagctgtattca
accaatggcaccttcctattggtcaacgtcacatccagagactctgggttgtatcaggtt
aacgtgagcaacgatcttggttctgagatcaaagtcttcagcatcagagtcagagcagag
gtcagaaccggagttcatccaggtttcagtatcatcctcatctcagccgcctgcattgct
gccgggctcacggcttttgctttggtcctcgactacatgaggagatccaggaagaaaggt
ttttatcagctggcccagtccgccccgccttcagcatga
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