Cyprinodon tularosa (White Sands pupfish): 119784675
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Entry
119784675 CDS
T07496
Name
(RefSeq) RNA exonuclease 5-like isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119784675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ctul03009
]
119784675
Ribosome biogenesis [BR:
ctul03009
]
Eukaryotic type
Pre-60S particles
RNases
119784675
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
119784675
NCBI-ProteinID:
XP_038142785
LinkDB
All DBs
Position
Unknown
AA seq
803 aa
AA seq
DB search
MDSSKPSTSVTCGEKKRKNEAPAADEGIKRFKTEEGVVLQERPRHSARLSVCLDRLQQPI
TLAELMELLHFAALGKAAGIKQPSWCRVHHQRNVSGINVVVVEGVTQSLFYKHYLLMEHL
RTSYTTRVTFTPSSNNVASEIFRCEVPNMDFSSVSKPEETLHTAVRHHPVITTFGTKRRG
LTAYVLSQQQLIKNRYPVKGFPGFEDFLCTGSDVCVTDQSPLYGLDCEMCLTEKGYELAR
VSLVDSDGNCVLDDLVKPQNRVLNYLTQFSGITAAMLRPVTTTLRDVQAKIRTLLPDNAV
VVGHSLNNDLVALKLIHQHVIDTSLLYRREFGQKFKLKVLAEAVLKRQIQSEERSGHNPT
EDAVAALELAQYFIKAGPRQVVELHLEELWGYKLKEESPKSTPAPTPSYRFADILQTTGR
SPAYFGKRADVALDLSHQCWYSSDKEIVSSFRKQTKHPFLSVVQLSSFYNYLKRRSANQP
QLYNNMCANLGEMCAVFAGPFPAGFSKRDVKRMFSCCGPVRRVQMLSTSVRNHAKVEFWM
LEGAVLALKVLNGLSVLGQTIKVQRPVNKSMLDLDLNLETLMSEKLNTNRLYVVKLRHDV
AQGLNISAKLNRCLSDANSSALPPGRPMNGLPQTAQINGKHTHSAKPELSEESVRETFSM
FGSIRSISLPGKPAKRAIHAYIEFQDAEGKHAALASSGRLLEDSYLVWPSITPPHLLSWI
GLMTESKPEQEEEETVEDFFDGGFQDQESSLLKKLDRRLSKVFRSLPDGTMSVVLLLEDT
SSTSSDHPGLCFLEVKMENQSRR
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggattcatctaaaccttcaacatctgttacatgtggcgaaaagaaaagaaaaaatgag
gctccagctgcagatgagggcatcaaaagatttaagactgaggagggagtagttctccag
gaaaggcctcgtcattcagcgaggctctcggtctgcctcgatcgtttgcagcagccaatc
acactggctgagctaatggagctgcttcattttgctgccctggggaaagcagcaggcatc
aaacagcctagctggtgtcgtgtccaccatcaaaggaatgtcagcggtataaatgttgtc
gttgtggagggagtgacgcagagtcttttctacaagcactacctcttaatggagcacctt
aggacaagctacacaactagggttaccttcacaccatcatctaacaatgtagcttcagag
atcttccgctgcgaagttccaaacatggacttttcatctgtttctaaaccagaggagaca
cttcatacagctgtgaggcaccatccagttatcactacatttggcacaaagaggagagga
ctgactgcatatgttctgagccaacagcagttgataaagaaccgctatccagtcaaagga
tttccaggtttcgaggactttttgtgcacaggcagcgatgtgtgtgtaacagaccagagc
ccgctgtatggactggactgtgaaatgtgtctgacagagaaaggatatgagctggctcgc
gtttccctggtggacagtgatggtaattgtgtgctggatgatctggtgaaacctcaaaac
cgtgttctcaactaccttacacagttctcaggtatcacagcagccatgttgaggccggta
acgaccaccttacgggacgttcaggctaagatcaggacgctgttaccggacaatgcagta
gtggtgggccattccctcaacaatgatctcgtcgcactgaaactcatccatcaacatgtg
attgatacctctctgctgtacaggagagaatttggacagaagtttaagctaaaggttctg
gccgaggcggtgctgaagaggcagatccaaagcgaggaaaggagcggtcataatcccact
gaggacgctgtggcagcactggagctagcccagtacttcatcaaagcaggaccccgtcag
gtggtggagcttcatctggaggagctgtggggatacaaactaaaggaggagtctcctaaa
agcacacctgcaccaacaccaagctacaggtttgcagacattttgcagacaaccggccgc
tccccagcatatttcggaaagcgagctgacgtcgctctggatctgtctcatcagtgctgg
tacagctctgacaaagagatagtgtcatctttcagaaagcagaccaagcaccctttcctc
tccgtcgttcagttgtcctccttttacaattatctgaaaagacgctcagctaatcagccg
cagctgtataacaatatgtgtgcaaaccttggagagatgtgtgcagtgtttgctgggccg
ttccctgcaggtttctccaaaagagatgtcaagcggatgttttcttgctgcgggccggtt
cggagagtccaaatgttgagcacaagtgtcaggaaccatgcaaaggtggagttttggatg
ctggaaggagcggtgctagctttaaaagtgctgaatggactcagtgtgctaggtcagacg
atcaaggtgcagaggcctgtaaacaaatcaatgctggacttagatttgaatcttgagact
ttaatgagtgagaaacttaacaccaatcgtctttatgttgttaaactgagacatgatgtg
gctcaggggctcaacatttctgcaaagcttaacagatgtctgtcagatgctaattcttca
gctttaccgcctggtagaccgatgaacggcttgccacaaaccgctcaaataaacggtaaa
catactcactcagccaaacctgaactgagtgaggagagtgtcagagagacattcagtatg
tttggttcaataaggagcatcagtctgcctggtaaacctgcaaaacgtgcaattcatgca
tacatagagtttcaagatgctgaggggaaacacgctgcgctcgcctcctctgggcgtctg
ctggaggacagttatctagtatggccgtccataactccaccccacctgctgtcatggatt
ggcctgatgaccgagagtaaaccagagcaggaagaagaggagacagtggaggactttttt
gatggtggttttcaggaccaggagtcaagtctcctgaagaagctggaccgccggctgagt
aaagttttccgctccctaccagacgggaccatgtctgtggtgctgctgctcgaggacacc
agcagcacaagttctgatcatcctggtttatgttttctggaagtcaaaatggagaatcaa
tccaggagataa
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