Cyprinodon tularosa (White Sands pupfish): 119784903
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Entry
119784903 CDS
T07496
Symbol
sox5
Name
(RefSeq) transcription factor SOX-5 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctul03000
]
119784903 (sox5)
Transcription factors [BR:
ctul03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
119784903 (sox5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
119784903
NCBI-ProteinID:
XP_038143112
LinkDB
All DBs
Position
Unknown
AA seq
789 aa
AA seq
DB search
MLLLSRETDPYSSMLTEPELPQECNRMSSKRPASPYGGTDGEVTMATSRQRVEDEESEGL
GGVIHLPLASYCGKVSPRSPPSRHLDSPPSTEHEGMKGSSLSPYPQHNATSPGKEESGGG
GRPCSDGGTATGTLGTPERRKGSLADVVDTLKQRKMEELIKNEPEEPPSIERLLSKDWKD
KLLAMGSGHIGEIKGTPDSLAEKERQLMGMIGQLSSLREQLLAAHEEQKKLAASQMEKQR
QQMELAKQQQDQIARQQQQLLQQQHKINLLQQQIQQVQGQLPPLMIPVFPPDQRTLAAAA
AQQGFLMPPGFNYKPGCSDPYPLQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSP
GAKQHSGSLAPQSNLGAHSPPTNSHPQGDKNRNSPSSHKNKDSEGAQPLNLSAKPKASES
KSPNSPPTSPQVPAAAAATTKLGPAGSLKHSAVPSSIGAPPTRVSSIADLLSSLSSTAYL
NDHEAVSKAFAEARQMKEQLKGEQQALDAKLASVSNLSLNNGRSDKEKAALESLSQQLKQ
QADDKFSHAMLDFTMSGDSDGSPSVSDSRIFRETRGRNNNEPHIKRPMNAFMVWAKDERR
KILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRT
CLVDGKKLRIGEYKAIMRSRRQEMRQYFSVGQQGQLPLSSAGMVYPGALSMAGMPSPQMP
SEHSSMSSSPEPNANHQNPHMPEGLKGDEPRIKEEELRLDDSNGDVYDDFDYEDEEADYT
SDNENHITH
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgttgttgttgtcgagagagacggacccttactccagcatgctcactgagcctgagcta
cctcaggagtgtaacaggatgtcttccaagcgaccagcctctccatatggggggacagat
ggagaggtaaccatggcaaccagcagacagcgagtggaggacgaggagagcgagggactg
ggcggtgtcatccacctccctctggcctcctactgcggaaaggtgtctcctcgctcgccc
cccagccgccacttggacagcccccccagcacggagcatgagggcatgaaggggagctcc
ctgagcccttacccacagcataatgctacctcaccaggcaaagaggagagcggaggtggg
gggcgcccctgcagcgatgggggcacggcgaccggtaccctggggacccctgagagacgc
aagggcagcctggcagatgttgtggacacactgaaacagcgcaagatggaagaactgatc
aaaaacgagccagaagagccccccagcattgagaggctgttgtcaaaggactggaaggat
aaacttttggccatgggctcagggcacatcggagaaattaaaggtaccccagacagcctg
gcggagaaggagcgccagctcatgggcatgattggccagttgagcagcctgagggagcag
cttctggcggcgcacgaggagcagaagaagctggccgcctcacaaatggagaagcagagg
cagcagatggagctggccaagcagcagcaggaccagattgcccggcaacagcagcagctc
ctgcagcagcaacacaaaatcaacctcctgcagcaacaaatccagcaggtccagggccaa
ctccctccactgatgattccagtgtttcctcctgaccagcggactctggccgccgccgca
gcccagcagggctttttgatgccccccgggttcaactacaagcctggctgcagtgaccct
taccctctccagctcatccccacaacaatggctgccgctgccgccgccacgccgggcctg
ggtcccctgcagctccaacagttgtatgcagctcagctggcggccatgcaggtttccccg
ggagcgaagcagcacagtggcagcctcgcgccacaatccaacctgggcgcacactcccca
cccacaaactcgcatccacagggggacaagaaccgcaattcgccatcctcacacaagaac
aaggacagtgagggtgcacagccactgaacctgtcggccaagcctaaggcatccgagagc
aagtcacccaactcccccccaacttccccacaggttcccgctgctgctgccgccaccacc
aagctgggtcccgctggctccctgaagcacagtgcagtgccctccagcatcggagcgccg
ccgaccagagtcagctcaatagcagacttgctgtcttcgctgtcctcaacagcctacctg
aacgaccacgaggcggtaagcaaggccttcgccgaggcccggcagatgaaggagcagctg
aagggggagcagcaggccctcgacgccaagctggcctccgtcagcaacctcagcctcaac
aacggacgctcagacaaggagaaagctgccttggagagtttgagtcagcagctgaagcag
caggccgacgacaagtttagccacgccatgctggacttcaccatgagtggagactctgac
gggtcccccagcgtgtcagactccagaatatttcgggaaacccgcggccggaacaacaac
gagccgcacatcaagcggccgatgaacgccttcatggtttgggccaaagacgagaggcgg
aagatcctccaggcgttcccagacatgcacaactccaacatcagcaagattctcggctcg
aggtggaaagccatgaccaacctggagaagcagccgtactacgaggagcaggctcgcctc
agcaaacaacatctggagaaatacccggactacaagtataaacctcggcccaaacgcacc
tgcctggtggacggcaagaagctgcgcatcggcgagtacaaggccatcatgaggtcccgc
aggcaggagatgagacaatacttcagcgtagggcagcagggccagctgcccttatcctca
gcaggcatggtctacccaggtgccctttccatggcagggatgccctccccccagatgccc
tcagagcactcgagcatgtccagcagccccgagcccaacgccaaccaccagaacccccac
atgcctgaaggactgaagggggatgagccacggatcaaggaggaagaactgcggctagac
gacagcaacggtgatgtgtacgacgatttcgactacgaggacgaagaggccgactacacc
agcgataacgagaaccacatcacccattaa
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integrated database retrieval system
