Cyprinodon tularosa (White Sands pupfish): 119784926
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Entry
119784926 CDS
T07496
Symbol
utp20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ctul03009
]
119784926 (utp20)
Ribosome biogenesis [BR:
ctul03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
119784926 (utp20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Motif
Other DBs
NCBI-GeneID:
119784926
NCBI-ProteinID:
XP_038143159
LinkDB
All DBs
Position
Unknown
AA seq
2796 aa
AA seq
DB search
MKIKSKSSNHKSENTHRFLTFAERLANVNIDVIHRIDRTGSYAEEVDTYFSEGLTKWRDL
NLTEHFTTFLKEVANKSQSFNMLVFHQKSIVESLKTHLAVKNSLAYQPLLDLVVQLARDL
QTDFYPHFPDFFLLVTSLLDTKDTEVLEWAFTCLSYLYKYLWRLMVKDMTNIYSLYSTLL
AHKKEHIRNFAAESFSFLMRKVPDLDALFNHIFSDLEQHPEKVEGTGQLLFEMCKGVRKM
FHSCAATALPVAWRKLGSTTSQGVSLPWDAVRDALDHMVQAAANYVDREHFLVLWDSLQA
SVEELSDSVGKTDEVGSEALEQLERLLFVLHTLVSHRDGAKVTKPETVTKMAVRLIDISS
RSVSCSRLLLQITSSLLLGENIHLPNALIQETIQKVFNSRLEQDLILEFTKEMFTMKQFE
QLFLPSLLRFTTGLFAHGDAPSRHSALDVLVNLILVKAPPPTDGSMAFETYPLLFTGQTT
SKEVEQQTVPELVISLIKLPEEQTIADLSLPWSALVLLPHIRPLSAATVLPTVAAFLNCI
LRDIEAEKMGKAALFVARQALSCLLSLDTSAQLLSLVPVDKVHSVLQRFPTDASALLLGD
LYYARLSLSGASEHLSHSALLQIYDTLQSNLSSNISNIRLLTLRILSQFEAELPTQMEEE
ESVEVQSVFSSCLLAELVPASVQDYREKLLHLRKLRHDLVQRSLPLGPPGTFQQVPLRYL
IAMLFVNFRPLWDPVIELIVSHARGMENKDFWRVFYEHLALVADLAEKELGVTDEGAAVE
KESPPPAEPGCDVIESGDVGVLFLDQLKMASEADERTDFPNFRSLLWRAMEQFADRVEPR
SRELSPLLLRFIRNEFYPADMLVAPTQDLRKRRETVNEESEMEEGGEEEEEEDAGKEQRK
TLPRRAAAKQLITHLKVFAKFTNPRSLYLESSLNDLYNQLLCHQDQQIQRVALECVLTFK
DANIVPYKENLERLLDDKHFKDEIVRFNISEETGVVDASHRGRLIPLLMRILFGRLRSKA
GSRFQGKTSAAARSSIVLRFLAGSQSEELGMFIDLLLEPLSHYSQGSCLGAVEKAVADTN
LAAVLPLGRQHSLLNIIHVVLDKLGHLIQAYLPKVLQILLCVNASVGTILDQRDQLRAGC
VSPLKNLRRLGILRIQDFFDTFDSYSFTPDEIDAVFQAVVWPQVCRLPTESPYSPTPLLK
LIHVWCKNPRYFPLLAKQRQNHPECDILLNVYTLLSAKNASSSTVTMVMDMIEALATAKD
FVPSEAESELSVNGCAFPLPEEGAVIGEEPLPQGSRLLLPHISTLLSYFSRLVRNKDRLK
KKKFRAQVAKELNILSKVSRFVSDTEQSSVLINLLLPYVLKGNNSQETEIDLLATIQNLL
RRSVQPSAFLRPIGKLFAIIHNKLPRQALTNVFQTLSDLDPSLTYITDLATKLNAFDSRH
LDEIYFDVRLTAFQEAMKRVKEMQTLDLDYISTLIYNCFHTYEIGDMSLGDNATLCVSAV
ISQVAAVEAGEQIYRDLILHIILDAVHKGLRSKSESVQHEFTSILACLVKTFPTKKDFRD
LVQLTDYNDPESDFFEHMKHIQIHRRARALRKFAKQLTEGTVVMTPRSLQNYIMPYAMTA
LLDEKMLKHENMTSASVEVVGAVCRKLTWSKYLYYLKHFVHILQTSQAEQKLAVSLLVTV
LEAFHFDHQTLSREMEAAKAREAESVAMDADNEDEAAADELDTSDDEEAMEIDDKPASTE
VPVETDAATQAEKEDKPEKTASKAPTKPDPRMTPVATGLPQSREELESLIAAIHQTVNDS
VLPRLNKCLTAKVTRDEEHKAVKSKAVKDEEVVRIPIAFAMVKLMQTLPTHIMEANLPGI
LIKVCVLLRNRFQEIRDVARATLVKIIETLGCRYLQYLLKEMQGVLVKGYQVHVLTFTVY
QLLSALIPTLQSGDLDPCMNMLIGIFNNELFGSVAEEKEVRGIVSKVMEARHSKSMDSYE
LLARYCSKESVAKLILPLKEILETSSSLKVCNRVAAVLRRLILGLLENSGMSSQDILLLS
HGLVSESLPLLTKRDRDKASAEPPPDPRLPPPSCLLLPPTPKRGGQKAPVSSRTNMHILV
DAGLKLLHLSLKKSKVTSSEASTLEMLDPFIQLLMECLSSMHVKVITEALMAFTWLLRFP
LPAVEQNAQQLTKQLFVLLKDYSKAGAARGENYQLVQNCFKAMTILVKNIKSNRISETQL
QVLLGYAEEDIYDQSRQATAFGLLKAILSRKLVVPEMEEVMRKVARFSVTGGNNMIRTHC
RQIYLKYLLDYPLGRKLKGHLSFVVAQLQYEQDTGRESVLELLASIFQMFPQNLLLKNSS
LFFAPLALVVVNDDSVRCKKMAAMAIKTLLGQLDVNHQNGLYSLVNAWLTAEKSTMRRLG
AQVCGLFVEVEEEKFSRRMDDLLPLLEKEIHPDAYEDISEEEEEKGADRLLFSYLTLISK
LNKHCGFLELRNPHQTLLHIWGHIEAHLRHPHCWVWLTASQLFGQLFATQPAEQLVAIWK
GQEGDASCRPAAIEFITSDLDRRMRELALIFCSQLQSKFLDTASGEQVIKNLLFVGKVIY
LISPESDITTLEGEKQSEVENGGDCDPDAEEKEEMEEENDDKDDDKPPSLLWLMKKLSLM
AKREAAYAPKVPLKRTCVFKFLGAIAVDLGKERLGPYLSTIITPLYRELDSTYAEQDPTL
KNLAQELIELLKKRVGLERFSLAFSAVQREFSQRRAARKRHRAMQAVANPDIAAKKKLKK
HRNKIEAKKRKIEFLRPGYKAKKHRSHALKDLAIMQ
NT seq
8391 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaaatccaagtcttccaatcacaaatctgagaatacccacaggtttctcaca
tttgctgaaagactcgccaatgtcaacattgatgtcatccatcgaatcgacaggactgga
tcttatgctgaggaggtagacacatacttttcagaggggctgacaaaatggagagacctc
aacttaacagaacatttcactacgtttttgaaagaggtggccaacaagagccagtccttc
aacatgctggttttccatcagaagtccatcgtggaaagcctcaaaacccatctggcagtc
aaaaacagtttggcctatcagcccctgctggatctggtggtgcagctggctagagacctg
cagacagacttttatccccacttccctgactttttcctccttgtcacgtccctgctggac
acgaaggacacagaggtgcttgagtgggctttcacctgcctctcttacctttataagtat
ctgtggaggctcatggtgaaggatatgaccaacatctacagtttgtacagcacattattg
gcacacaagaaagagcacatccgtaactttgcagctgagagtttctcttttttgatgaga
aaggttccagatctggatgctttgtttaatcacattttctcagacctggagcagcatcca
gagaaagtggagggcacaggtcagctgctgtttgagatgtgcaaaggggtccggaagatg
ttccactcctgtgctgcaacagctcttcctgttgcctggaggaagctcggctccacaacc
agccagggggtctctctaccttgggatgctgtcagagatgctctcgatcacatggtccag
gctgcggctaattatgtagacagggagcacttcctggttttatgggattcgcttcaggcc
agtgtggaggaactttcagactctgtgggaaaaacagatgaagtgggatctgaggcactg
gagcagctggagaggctgctgtttgttctccacaccctggtgtcccacagagacggagct
aaagtcaccaagccggagaccgttaccaagatggctgttcggctgattgacatctcctcc
cggtcagtctcctgctcacgtctacttctccagatcacctcctctctgctgctaggggag
aacatccacctgcccaatgcgctcatacaggaaaccatccaaaaggtgtttaacagcagg
ttggagcaggatctgattctggagttcactaaggagatgtttaccatgaagcagtttgaa
cagctcttcctccccagcctgctacgctttaccaccgggctgttcgcacacggagatgcc
ccttcacgccacagtgcactcgatgtgctggtcaatctgatcctggtcaaagccccgccc
cccacagacggttccatggcctttgaaacgtacccgcttctgttcaccggccagaccaca
agtaaggaagtggagcagcagacggtaccagaactggtgatttctctgatcaaacttcca
gaggagcagacaatagctgatctgtcgctgccttggtccgcactggttctgctgccacac
atcagacctctgtcagcggctacggttctccccactgtggcggcttttttgaactgcatt
ctccgtgacatcgaggcagagaaaatgggaaaagctgccttgtttgtagccagacaggct
ctgagctgcctcctctcattggacacctctgcccagctgctctcgctggttcctgtagat
aaagtccattcagtcctgcagaggttccccacggatgcgtcggctctgctgctcggtgac
ctatactacgcccgcctgtcgctcagcggcgcatcagagcatctgtcccacagcgcgttg
ctgcagatctacgacacgctgcaatccaacctctcctcaaatatttccaatatccgcctg
cttactctgaggatcttatcccagtttgaggcagagctcccaacgcagatggaggaggag
gagagcgtggaggtccagtcggtgttctcctcttgcctgctggctgagctggtgcccgca
tcggtgcaggactacagggagaagctgcttcacctccggaagctgaggcacgacctggtg
cagcggagcctcccgcttgggccgccgggaaccttccagcaggtccctctgaggtacctc
atcgccatgctgtttgtcaatttcaggccgctctgggatccagtcatcgagctcattgtg
agccatgctagaggaatggagaacaaggacttctggagggttttttatgaacatctggcg
ttggtggcagacctcgcagagaaggagctaggtgtgactgacgaaggtgccgccgtcgag
aaagagtctcccccacctgcagagcctggctgtgatgtcattgaaagcggagacgtcgga
gtgctgttcctggatcagctcaagatggcctccgaagccgacgagagaaccgacttcccc
aacttccgcagccttctgtggcgagccatggagcagttcgccgacagggtggagcctcga
agcagagagctgagccccctactgctccggttcatcaggaatgagttttatcccgccgat
atgctcgtcgctcccactcaagacttgaggaaaagaagggaaaccgtcaacgaggaatca
gagatggaagaggggggagaggaggaggaagaggaagatgccggcaaggaacagaggaag
acgcttccaaggagagctgctgcaaaacagctcatcacccatctgaaggtgtttgctaaa
tttaccaaccctcgatctctatatctggagagcagcctcaacgacctctataaccagctg
ctctgccatcaggaccagcagattcagcgcgtggctctggagtgtgttctcaccttcaaa
gatgccaacatcgtcccctataaggagaacctggagcgacttctggatgacaaacacttc
aaagatgagatcgtccgtttcaatatttctgaggaaacgggagtagttgatgcttcgcac
agaggccgactgatcccactgctcatgaggatcctgtttggccgcctgcgcagcaaagcc
ggcagtcggttccagggaaagacgagcgccgccgcccggtcctccatcgttctgcgattc
ctggctggcagccaatccgaggagctggggatgttcatcgatctacttctagagcctttg
tcccattacagccaaggatcctgtctgggcgctgtggaaaaggccgtagctgacaccaac
ctcgctgccgtccttcctctgggccgccagcacagcctcctgaacatcatccatgttgtg
ctggacaagctggggcacctcatccaggcatacctgcccaaagtgctgcagatcctgctg
tgtgtcaacgcctctgtgggcaccatcttggaccaaagagaccagctgcgagcaggatgt
gtcagtcctttgaagaacctgaggagactggggatcctcagaattcaggacttcttcgac
acatttgactcgtacagctttaccccagatgagatcgacgctgttttccaggctgtcgtc
tggcctcaggtgtgccgtctccccacagagagcccctattcccccacccctctgctgaag
ctcatccacgtttggtgcaaaaaccccaggtattttcccctgctagccaagcagaggcag
aaccacccagagtgcgacatcctcctaaatgtctacaccctcctgtctgccaaaaacgca
tcctcttccaccgtcaccatggtgatggacatgatcgaggccctggcgaccgccaaggat
ttcgtcccttcagaggcagaatcagagctgagcgtaaacggctgtgctttccctctgcct
gaagagggcgccgtcatcggagaagaaccgttacctcagggctccagactcctgctgcct
cacatctccaccctgctgagctatttcagcaggttggttcgcaacaaggacagactgaag
aagaagaaattcagagcacaggtcgccaaagagctcaacatcctctccaaggtgagtcgg
ttcgttagcgacacggagcagagctcagtgctcatcaacctgctgcttccgtatgtcctc
aaaggcaacaactctcaggagacggagatcgacctcctggctaccattcagaacctgctg
cgccgcagcgttcagccctctgctttcctgcgcccgatcggcaaactcttcgccatcatt
cacaacaagctgcccaggcaggccctcaccaatgttttccagactctgtcagatctggac
ccttcactcacgtacatcacagatttagccacaaagcttaacgccttcgacagccgacac
ctggatgagatctacttcgacgtgcggctgacagccttccaggaggcgatgaagcgggtt
aaagaaatgcaaactctggacctggactacatcagcactctcatctacaactgtttccat
acatatgagatcggtgacatgtcgctgggagataatgccactttgtgtgtgtctgcggtg
atcagccaggtggcagctgtcgaagctggggagcagatctacagagatctgattctacac
atcattctggatgctgtccacaaggggctccgcagcaaatcagagagcgtgcagcatgaa
ttcacctccatcctcgcctgtctggtgaagaccttccccactaagaaggacttcagagac
ctggtgcagctcacagactacaacgacccagagtcggacttctttgagcacatgaagcac
atccagatccaccggcgagctcgcgctctcaggaagtttgccaaacagctgaccgagggc
acggtggtgatgacgccgcgttcgctccagaattacatcatgccgtacgccatgaccgcc
ctgctggatgagaagatgctaaagcacgaaaacatgacatccgcctcagtggaggttgtg
ggagctgtgtgccggaagctgacgtggtccaaatatctgtactacctaaagcatttcgtc
cacatcctgcagacatcccaggctgagcagaaactggccgtcagtttgctggttaccgtc
ctggaggctttccattttgaccatcagaccctcagcagagaaatggaggccgccaaagcc
agagaagctgagagtgttgccatggatgccgataacgaggacgaagctgcagctgacgag
ctagataccagcgatgatgaggaagcgatggagatcgacgacaagcccgcatccactgaa
gtccccgtggaaacagatgccgccacacaagccgaaaaagaggataaaccagagaaaaca
gcctcaaaagcccctacaaagccagaccccaggatgacccccgtggctactgggttaccc
cagagccgagaggagctggagtccctcatcgctgccattcatcagactgtaaacgacagc
gttctgccgcgcctcaacaagtgtctcactgcaaaggtaacacgtgacgaggagcacaaa
gcggtgaagtctaaagcggtgaaggacgaggaggttgtgcggattcccatcgctttcgcc
atggtcaagctcatgcagactctgcctactcacatcatggaggccaacctcccagggatc
ttgatcaaggtttgcgtgctgctgagaaaccgcttccaggagatccgtgacgtagccaga
gcgacgttggtgaaaatcatcgagactctgggctgcaggtatctgcagtatctgctaaaa
gagatgcagggggttctagtcaaaggctaccaggttcacgtgttgacgttcacagtgtac
cagctgctgtctgccctcattccaacgctgcagagtggcgacctggacccctgcatgaac
atgctgattggaatcttcaacaatgagctgtttggttcagtcgctgaggagaaggaagtc
aggggcatcgtttccaaggtgatggaggcgcgacacagcaagagcatggactcgtacgag
ctgctggcccgttactgcagcaaggagagcgttgctaagctcatcctgccgctgaaggag
atactggagacttcatccagtttgaaggtgtgtaatcgagtggcggctgtactgcggcgt
ctgatcctgggtctgctggaaaacagcggcatgagctcacaggacatcctgctgctgagc
cacggtctggtgagcgagagcctgccgctgctcaccaaacgggaccgagacaaggcttca
gctgagccccccccagatccccggctgccccctcctagctgcctgctgctgcccccgacc
ccaaagagaggagggcagaaagctcccgtcagcagccgcaccaacatgcacatcctggta
gacgctggactcaagctgctccacctcagcctaaagaaatccaaagtgacttcgtctgag
gcgtcgactctggagatgctggatcctttcattcagctgctgatggaatgcctcagctcc
atgcatgtgaaggtgataactgaggctctgatggctttcacctggctgctgaggtttcct
ctgccagcggtggagcagaacgcccagcagctgaccaagcagctcttcgtccttctgaag
gattactccaaagccggtgctgcgcgcggggagaactaccagctggtccagaactgcttt
aaggcgatgacaattctggtgaagaacatcaaaagtaacaggatctctgagacgcagctg
caggtgctgctgggatacgctgaggaggacatatacgatcagtcgcgccaagcgactgcc
ttcggcctgcttaaggcaatcctgtccaggaagctggtcgtcccggaaatggaggaggtg
atgaggaaagtggccaggttctccgtcacgggagggaacaacatgatcagaacccactgt
cgacagatctacctgaagtacctgctggactaccctctgggccggaagctgaaaggccac
ctgagctttgtggtggcccagctgcagtacgagcaggacaccggcagggagtcggtgctg
gagctgctggcctccatcttccagatgttccctcagaatctgctgctgaagaacagcagc
ctgttcttcgcaccactagcgttggtcgtggtcaatgacgattcagtccgctgtaagaaa
atggccgccatggctattaagacactgcttggtcagcttgacgtaaaccaccagaacggg
ctgtactcgctggtcaacgcctggcttacagcggaaaagtccaccatgcggcgcctcgga
gctcaggtttgcggcctgtttgtggaggtggaggaggagaaattttcccggcgaatggac
gaccttttaccattgctggagaaagaaatccaccctgatgcctacgaggatatctcggag
gaggaggaggagaaaggagccgacaggctgctcttcagttacctcactctcatctccaaa
ctgaacaaacactgtggttttctggagctccgcaatcctcaccaaacgctcctccacatc
tggggtcacattgaagcccacctgcgccatcctcactgctgggtgtggctcactgcctcg
cagctgtttggtcagctcttcgccacccagccagcggagcagctggtcgccatttggaaa
ggacaggaaggggacgcctcgtgtcgccctgcagccattgaattcatcaccagcgacttg
gacaggaggatgagagagttggctttaattttctgtagccagctgcagtctaagttcttg
gacacggcatcaggagagcaggtgatcaaaaacctcctcttcgtcggaaaggtgatctac
ctcatatccccagagtctgacatcaccacactggaaggagagaagcagagcgaggttgaa
aacggaggggattgtgatcctgatgctgaagaaaaggaagagatggaggaggagaacgat
gataaagacgacgacaagcctccttctttgctgtggctcatgaagaagctgtctctgatg
gccaagagagaagcagcttacgctcctaaagttcctctcaagagaacctgtgtgtttaag
ttcctgggagccatagcagtggaccttgggaaggaacgcctcggtccctacctctccacc
atcatcactcctctatatagagagctggacagcacatacgctgagcaagatccaaccctg
aaaaacttggcacaggagctgattgagcttctgaagaaacgggtagggctggagaggttc
tccctggccttttccgcagtccagagggagttttcacaaagacgagcggctcggaagcga
cacagagccatgcaggcagtggcaaacccagacatcgctgccaagaagaaactcaagaag
cacaggaataaaatcgaggcaaagaagagaaagatcgagtttctgcgacctggatataaa
gcgaagaaacaccgaagccatgcgctcaaagacctggccatcatgcaatag
DBGET
integrated database retrieval system
