Cyprinodon tularosa (White Sands pupfish): 119784934
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Entry
119784934 CDS
T07496
Symbol
lsm1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119784934 (lsm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctul03019
]
119784934 (lsm1)
Messenger RNA biogenesis [BR:
ctul03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119784934 (lsm1)
mRNA degradation factors
5'-3' decay
Lsm complex
119784934 (lsm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
119784934
NCBI-ProteinID:
XP_038143168
LinkDB
All DBs
Position
Unknown
AA seq
133 aa
AA seq
DB search
MNYVPGTASLIDDIDKKHLVLLRDGRTLIGYLRSIDQFANLVFHQTVERIHVGKKFGDIP
RGIFIVRGENVVLLGEMDVDKPCDTILQQVSIEEILEEQRLQQQAKQETEKVKMQVLKDR
GLSIPKTDNLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactacgtaccagggaccgctagcctcattgacgacatcgataaaaagcacctggtg
ctgctccgagatggcagaactctgattggttacctcagaagcatcgatcagtttgccaat
ttagtgtttcaccagacggtggagcgaatccacgtggggaaaaagtttggcgacatcccg
agaggaattttcatcgtgagaggagaaaatgtggtgctgcttggagagatggacgtggac
aaaccctgtgacaccatcctgcagcaggtctccattgaggagatcctggaggagcagcgg
ctgcagcagcaggccaaacaggagacagaaaaagtgaagatgcaggtcctgaaggatcga
ggcctatccattcccaaaacggataatttggacgagtactaa
DBGET
integrated database retrieval system
