KEGG   Cyprinodon tularosa (White Sands pupfish): 119784958
Entry
119784958         CDS       T07496                                 
Symbol
sf3a1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
ctul  Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ctul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119784958 (sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ctul03041]
    119784958 (sf3a1)
Spliceosome [BR:ctul03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    119784958 (sf3a1)
 Complex B
    119784958 (sf3a1)
 Complex C
   U2 SnRNP specific factors
    119784958 (sf3a1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Rad60-SLD Ubiquitin_2
Other DBs
NCBI-GeneID: 119784958
NCBI-ProteinID: XP_038143212
LinkDB
Position
Unknown
AA seq 784 aa
MPPGPVQIVQPEPNNKPNDGPAEETPATKPIVGIIYPPPEVRNIVDKTASFVARNGPEFE
ARIRQNEINNPKFNFLNPNDPYHAYYRHKVNEFKEGKAQEPSAAIPKVMQQQAMQQTQQL
PQKVQVIQEAVVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKEQ
RNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLIKLKKEAVNPKEVMDQVRYRVEWA
KYQERERKKEEEEREKERVAYAQIDWHDFVVVETVDFQPNEQGHFPPPTTPEELGARILI
QERYEKFGESEEVEMEVESEDEDDEREKRADGQPSQPDQDTQIQDMDEGSDEEEDGGKAP
LPPDNPMPPPLPPAPEQVIIRKDYDPKASKPPPSVAAPDEYLISPITGEKIPASKMQEHM
RIGLLDPRWLEQRSRTIQDRQTEDEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKIG
EEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVGEDETKEKIGPSK
PSEIHQPPPIHSSAPNLPKPSPPVTAVSRPPVSVAPPVRTTLLSAVPVIPRPPVAPVVRL
APGQVITQMPPMIPAPRVNVVPMPPAPHLMAPRPPPMVVPTAFVPAPPMPQPPSAVPAPP
VHPPPPHEDEPVNKKMKTEDNLIPEEEFLRRNKGPVAVKVQVPNMQDKSEWKLNGQVLNF
TVPVTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMINGSIIHLALKERG
GRKK
NT seq 2355 nt   +upstreamnt  +downstreamnt
atgccgcccgggcccgttcagatagttcagccggagcccaacaacaagccaaatgatggt
cctgcagaagagaccccagccactaaacccattgttggcatcatataccctcctccagag
gtccggaacattgttgacaagacggctagttttgtagccaggaatggaccagagttcgaa
gcaagaatccgtcagaatgagatcaacaaccctaaatttaatttccttaatcccaacgat
ccctatcatgcttattaccgccacaaggtcaatgaatttaaggagggcaaagcacaagaa
ccctctgcagcaatccctaaggtcatgcaacagcaagccatgcagcagacccagcagctt
cctcaaaaggtgcaggtgattcaagaggccgtggtcccaaaagaaccacctccagagttc
gagttcattgctgatcctccatcaatctctgcatttgacctggatgtcgtgaagctaact
gcacagtttgttgctcgcaacggccgtcagtttctcacccagctcatgcagaaggagcag
aggaattaccagtttgattttctgcgcccacagcacagccttttcaattacttcaccaaa
ctggtggagcagtacacaaagattctgatccctccaaaaggcctgctaatcaaacttaag
aaagaggccgtgaatccaaaggaagttatggaccaggtgagataccgtgttgagtgggct
aaataccaggaacgtgagagaaagaaggaggaagaggaaagggagaaagaaagggtagca
tatgcccagatagactggcatgattttgttgttgtggagactgtggatttccagcctaat
gaacaaggccacttccctccgcctacaaccccagaggagctgggcgctcgcatcctgatc
caggagcgctacgagaaatttggagaaagtgaggaggttgaaatggaggttgagagtgag
gatgaagatgatgaaagagagaaacgtgctgacggccaaccttcacaacctgatcaagat
actcaaatccaagacatggatgagggatctgatgaggaagaggatggtgggaaggctcca
ttgccaccagacaacccaatgcctcccccgcttcctccagctccagaacaggttattatt
cgcaaggactatgaccctaaagcttccaagcctccgccttcagttgccgccccggatgag
taccttatttcaccaatcactggtgagaagattccagccagtaagatgcaggagcacatg
cgtattggcctgctggatccgcgctggctggaacagagaagccgaaccattcaggacaga
cagactgaggatgaggtctatgcccctggtttggatattgagagcagcttgaaacagctg
gctgagaggcgtactgatatctttggtgtggaggagacagccattggtaagaagattggt
gaagaggaaattcagaagcctgaagaaaaggttacctgggatggccattcaggaagcatg
gctcgcacacagcaggcagcgcaggccaacatcaccctgcaagagcagattgaagccatt
cacaaggccaaaggattggtgggagaggatgaaacaaaggagaaaattggtccaagcaag
ccaagtgaaattcatcagcctcctcccatccactcatctgcacccaatctgcctaaacct
agtcctccagtcacagctgtgtcacgcccacctgtctctgtggctcctccagtccgcacc
actctgttgtctgcggtacctgtgattccaaggccccccgtggctcctgttgtacgcctt
gcaccaggacaagtcataacacagatgccccccatgattccagctccccgtgtcaatgtg
gttcccatgccaccagctccccatctcatggcccccagaccacctcctatggttgttcca
actgcctttgtccctgctcctcccatgccgcagccacctagcgctgtcccagcaccaccc
gtccacccacccccgccgcatgaggatgagccagtcaacaagaagatgaagactgaggac
aacctcataccagaagaagagttcctgcgtcgaaacaagggtcctgtggcagtcaaagta
caagtccccaacatgcaggacaagagcgaatggaagctaaatggccaagttctgaatttc
acagtcccagttacagaccaggtgtctgttattaaagtcaaaatccacgaggcaaccggc
atgccagctggaaaacagaagctacagtatgagggcatcttcatcaaggattcaaactct
ttggcttattacaacatgatcaatggttcaatcattcatttggctctgaaggagagaggt
ggaaggaagaaatga

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