Cyprinodon tularosa (White Sands pupfish): 119785178
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Entry
119785178 CDS
T07496
Symbol
fn1a
Name
(RefSeq) fibronectin 1a
KO
K05717
fibronectin 1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04510
Focal adhesion
ctul04512
ECM-receptor interaction
ctul04810
Regulation of actin cytoskeleton
ctul04820
Cytoskeleton in muscle cells
ctul05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119785178 (fn1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119785178 (fn1a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119785178 (fn1a)
04810 Regulation of actin cytoskeleton
119785178 (fn1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
119785178 (fn1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctul04131
]
119785178 (fn1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ctul04147
]
119785178 (fn1a)
00536 Glycosaminoglycan binding proteins [BR:
ctul00536
]
119785178 (fn1a)
04990 Domain-containing proteins not elsewhere classified [BR:
ctul04990
]
119785178 (fn1a)
Membrane trafficking [BR:
ctul04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
119785178 (fn1a)
Exosome [BR:
ctul04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
119785178 (fn1a)
Glycosaminoglycan binding proteins [BR:
ctul00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119785178 (fn1a)
Domain-containing proteins not elsewhere classified [BR:
ctul04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
119785178 (fn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
fn1
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
fn2
Fn3_Dep-1_2nd
NDNF
Interfer-bind
Fn3_Dep-1_5th
FN3_Tor_3rd
Fn1_2
Motif
Other DBs
NCBI-GeneID:
119785178
NCBI-ProteinID:
XP_038143567
LinkDB
All DBs
Position
Unknown
AA seq
2496 aa
AA seq
DB search
MSGHSALTRVLVALCVGSAVRCMPQEAHNNPQQYRPPSVSQDGCIENGRSYNVNEQWERR
YLSGTLICTCNGVAGIKCRSKPEEEKCYDKLGQKYYNVGETFESPRDGMIWDCTCIGSGK
GRISCTIANRCHDNGASYKIGDTWRRPHEGGYMLECVCLGNGKGEWTCKPVAERCVDQSV
GRSYVVGETWEKQYQGWMIIDCTCLGEGNGLITCTSRNRCNDQDTQTSYRIGDTWTKTDS
RGHELQCLCTGNGRGEMKCERHASLHTTGLGTGSHLVTNIQPAVYHPVSVPELLEGPCKT
DSGLTYFNGQRWIKNQGNKKMICICMGNGVSCDQWDGPAPVYGGNSGGLPCVFPFVYKGK
TYHSCTSDGRSDGQLWCSISSDFEKEQKYSFCTEKNVAVMTRGGNSNGALCQFPFIYNGR
NYTDCTSDGRRDGMKWCGTTTNYDADHRFGFCPMTANEEVCTTTEGLMYRVGDQWDKRHD
VLGHMMRCTCVGNGRGEWSCVAYSQLKEHCLVDGVTYEVNQTFTKEHEEGYMMNCTCFGQ
GRGRWKCDAIDHCQDPETRTIYQVGESWDKVIQGVMYKCICYGNGVAEHGCEPQLSYPGG
HHPVQVIIAESGGQQNSHPVQWNTPASAHITQYILKWRVKDTATPWMEVIIPGHLNSYTI
SGLKPGITYEGQLISMLRFGHREITRFDFTTTYGSLIPSYGETTPLPPVVEISESVTEIT
SNSFVVSWVSASDTVSGFRVEYELIEQGQGTGQPFVLDLPRSATSVNINELLPGRKYNVN
VYEVTDGEETNLILTTSQTTAPDTPKEPEVEEVGDTSMTITWDKPLAPITGYRVVYVPSE
EGENTELTLPDTASSVTLSGLLPGILYNISIYAVEDSLESEPTFVQVKTTGETLPDNVNS
PSDLQFFEVSDAKIVLTWSSPVAGDVSGYRVTVSQVDDSDSPQSEMTLPVHQNSYVEVTH
LNPGTLYRFSVYTIYNGKESLPLIGEHATNPDAPTDIHFNNITEDSAVVLWFVPRAKITG
YRLFLTVEGSNPKQIHLPAHLTQHTLLNLQPDTEYNVTLYSEQGNTLSVGETAIFTTNSR
MGNAPQFNTDVTDTSIVISWSPVPRIGYKLSVRPSLGGEAPRDVISESGSIYISGLTPGV
EYTYSVQSVFDGQEQGTPVTRRVVTPLSPPTDLNLESNPGNSDITVQWNKPNTPDITGFR
VTCTPTSGQQGNSIEEFVEAGQNSCTLENLSPGVEYNVSVVTLKDDMESSPVSTVITPEV
PQLTDLTFEGVTDTSISLRWSPLSTTTVTGYKITVVASGDSIPIFEDMVMPSSGQYTVHG
LEPGIDYDISVTTVTEHGESEPTTITQQTSVPAPLGLNFGEVGPDSVEVTWESPQVPNPS
DINTFVIRYHPIDNEDQTLETTVGGDTNSLVLRNLVPNTEYLVSVMCVYEQRQSSPVVGI
IKTALDSPVGLRFSEITTNTFTVHWQAPRSRITGYRIRYQMVSGGRAKDERLPPSRNHYI
MTGLAPDTDYLVSIFAVSGGQESVPLSGTQKTISDAPTDLEVLDSTPTSITVRWAAPPVT
VRYYRITHGESGGHTKEFTVPGTKSTATISDLKPGTDYTITVYAVTGRGDSPASSIPIYV
THRTGVDSPSEMQVTDVNDSSITVRWSPAQGPIKGYKVTGTPRYGEGVSFTEVVAPDQTE
FTFSGLLPTAEYIFSVNALGQNGESSPLVVNAATNVDRPKDLTFTDVGSTALRITWDSPE
GFVTSYRVLYSSSEEGERELYPAPRGDAESAVIHGLQPGTEYTVKVIAVHGGTTSTPLIG
TQATAISPPTNLQFTEVGSTSFTMSWTSPGQENLITGLPGLTGYRVVVNPKKKSGPTKEI
SVAPDSTQVHIPGLMTATTYEVNVYALKNSLTSRPIQGEVTTLENISPPRRVRISEIKDS
SITLTWRAKAETISGFLIEAAPITASSGYIPIQRTIGPESRKYILEGLEPGTTYKVNLYT
LKGNGRSSPFELTASTAQPTVIPPTNIRFTSLNPTSISFMWEPSLSPRITGYYVTYEEAG
GLPQELIPRPHAGQSSATINGLKPGTEYVINIVALQNILRSKPLVGKARTQPASHHILVP
ELPQLAVPHRPTIDILDVPERFNDKIFDSNTVHLAGTSGQTQPDQHGQHIYTEYQNLGPN
VGLPSPYGGPKEGQRPTLREPLIYIPVAGPDGNRVPLVYETPLPGLAFGFPDNETELPQE
AKTMTTISWQPVPETTEYEVSCNPLTDLEEGGLQMRLPGTSNSATLIGLTSGASYNVVVE
AVTDGDKQKVLEEVVTVGNAVPDDLPVTPRGDVCYDTFTHTYHEVGSEWERMSETGFKLW
CRCMGLGSGHFRCDSSKWCHDNGNNYRIGEKWDRRAENGHMMSCTCLGNGKGEFKCEPHE
STCYDDGKMYQIGSQWQKDYMGAICTCTCYGGQQGWRCENCRRPGGQTNVEAEVLQPGGL
DAFQRYRENALRKLNIQCPVECLDPELLADAQSNLE
NT seq
7491 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtcacagcgccttaaccagggtgctggtcgccctgtgcgtcgggagcgcagtg
cgctgcatgccccaggaggcgcacaataacccgcagcagtatcgccctccctctgtctct
caagatggctgtatagagaacggtcggtcatataatgttaacgagcagtgggagcgccgc
tatttaagcggcacactgatttgtacctgcaatggagttgctgggattaagtgcagaagc
aaaccagaagaggaaaagtgctatgacaaactcggccagaagtactacaacgtgggagaa
acctttgagagcccaagggatggcatgatctgggactgcacatgtattggatccgggaag
ggcagaatcagttgcaccattgcgaatcgctgtcatgataacggggcctcatataagatc
ggagacacctggagaagaccccatgaaggaggctacatgctggagtgtgtctgtctgggt
aatggcaagggagaatggacttgtaaacctgtagctgagcgttgcgttgaccagtctgtt
ggacgatcctacgttgttggggagacatgggagaagcagtaccagggatggatgataatc
gactgcacctgtctgggagagggaaatggactgatcacgtgcacatccagaaatcgctgt
aatgaccaggatactcagacctcataccgtattggagacacatggacaaagacagattct
cgtggccacgagctccagtgtctctgcacagggaacggccgtggggagatgaagtgtgaa
cgacatgcctcacttcacaccaccggcttaggcactggctctcatttggtgaccaacatc
cagcctgcagtctaccaccctgtttctgtaccagagctcctggagggaccctgcaagact
gactcaggcctaacttacttcaatgggcagcgctggatcaagaaccagggaaataaaaag
atgatctgtatctgcatgggaaatggagtaagctgtgatcagtgggatggaccagctcca
gtgtatggtggcaactccggaggccttccctgtgtgttcccatttgtttacaaggggaaa
acctaccactcctgtacctctgacgggcgtagcgatgggcagctgtggtgttctatttca
tcggactttgagaaagagcagaaatattctttctgtacagagaaaaatgtggccgtgatg
acacgaggtggtaattcaaacggtgctctgtgtcagtttccattcatttacaatggccgg
aactacactgactgtacttcagatggtcggcgggacggcatgaagtggtgtggcaccaca
acaaactacgatgcggaccatcgctttgggttttgtccaatgactgcgaatgaagaagtg
tgcacaacaaccgagggtctgatgtaccgtgtaggtgaccagtgggacaagagacacgat
gttctcggtcacatgatgcgttgtacatgtgtcggcaatgggagaggagaatggagctgt
gtcgcttactcccagcttaaagaacattgtcttgtggacggtgtgacctatgaagttaac
cagactttcaccaaagaacacgaagaaggatacatgatgaactgcacctgctttggtcaa
ggccgcggtcgctggaagtgtgatgccattgaccattgccaggacccagaaacaagaact
atctaccaggttggagaatcttgggacaaagtgatccaaggagtcatgtataagtgcatt
tgctatggcaatggtgttgcagagcatggatgcgagccccagctgtcatatcctggtggc
catcatcctgttcaggtaatcatagcagaatctggaggccagcaaaattcccatcctgtt
cagtggaacacaccagcttcagcccatataacccagtacatcctaaaatggagagtgaaa
gacacagctaccccatggatggaggttatcattcctggccatcttaactcctacaccatc
tctggactcaaaccagggattacatatgagggccagttgatcagcatgctgcggtttgga
cacagagagattactcgctttgacttcaccaccacttacggatcacttattccatcatat
ggagaaaccacacctctaccccctgtagttgagatctctgaatcagtgacagaaatcacc
tccaacagcttcgttgtgtcctgggtttctgcctccgacacagtgtctggtttcagagtg
gagtatgagctgattgaacagggtcagggaactggacaaccttttgttttagatttgccc
cgttcggccacctcagtgaacattaatgagcttttgccagggaggaaatacaatgtcaac
gtctatgaagttacagatggagaggaaaccaacctcattctcactacttcacagacaact
gcacctgataccccgaaggaacctgaagtagaagaggtgggagatacttccatgacgatc
acctgggataaacccctggctccaattactggatatcgcgttgtctacgtgccatcagag
gagggtgaaaacacagagctgacactccctgatacagcatcatctgtgactctcagtggc
ctcctgccaggaatcctctacaacatcagcatctatgctgtggaagacagtctggagagt
gaacccacctttgttcaagttaaaactactggggaaacactgccagataatgtgaattcc
ccgtctgacctgcagttctttgaggtgtctgacgcgaaaatcgttctgacttggtcgagc
ccagtagccggcgacgtgtcgggttaccgggtcactgtgtcgcaggtcgatgattctgac
tctcctcagagcgagatgactctacctgtccatcagaactcctatgttgaagtaacacac
ctaaatccaggcacactctaccgcttcagtgtgtacaccatttacaacgggaaggagagc
ttgccactaatcggcgaacacgccactaatcccgatgctcccacagacattcacttcaat
aacattactgaggacagtgcagtggttctgtggtttgtacctcgtgccaagattacaggc
taccgtctcttcctgactgtcgagggttcaaacccaaaacagattcacctgccggcacat
ctgacacaacacaccctccttaacctgcagcctgacacagagtacaatgtcactctttat
tcagagcaaggcaatacactgagtgttggagagactgccattttcaccacaaactcacgg
atgggtaacgcccctcagtttaacacagatgtcacagatacttccatagtaatctcctgg
tctccagttccccgtattggatacaagctgtcagttcggccaagtttgggaggagaagct
ccaagagatgtcatctctgaatcgggaagtatttatatttctggtctgactcctggagtg
gaatacacctacagcgtccagtcggtttttgatggtcaagaacaaggaaccccagtcaca
cggcgtgtcgtcactcctctgtcacctcctactgatctgaacttggaatccaacccagga
aacagtgacattactgtccagtggaacaaacccaacaccccagacataacaggcttcaga
gtgacatgcactcccaccagcgggcagcaaggaaacagcatagaggaatttgtggaggct
gggcagaattcctgcactctggaaaacctgagtcccggggtggagtataatgtcagtgtc
gtcactttgaaagatgatatggaaagctctcctgtatcaactgtcattaccccagaggtt
ccacaactgaccgacttaacctttgagggggtgactgacacaagcatcagccttcgctgg
tcgccactcagcaccacgaccgtcacgggttacaagatcacggtggttgcatcaggcgac
agcatccccattttcgaggatatggtcatgccgagctcaggccagtacacagtgcatgga
cttgaacctggcatcgactatgacataagcgtgacaacagtaaccgagcatggcgagagc
gaacccaccaccatcactcaacaaacctccgtaccagccccccttggtttgaactttggc
gaagttggaccagacagtgtcgaggtcacctgggagtctcctcaagtcccaaacccctct
gacattaacacctttgttattagataccatcccatcgacaatgaagaccaaactttagaa
accactgttggaggcgatacgaatagtttggtgctgaggaatttggtgcctaacacagag
tatctagtgagcgtgatgtgtgtttatgagcagaggcagagctctcccgttgttggtatc
ataaaaacagctctggattcaccagttggcctacgtttctctgaaatcactaccaacacc
ttcactgtacactggcaagccccccgaagcagaatcactggttaccgcattcgctaccag
atggtcagcggtgggagggccaaggatgagaggctgcccccttcaagaaaccactacatc
atgactggccttgctccggacactgactacttagtcagcatctttgctgtgagcggggga
caagagagcgtcccgctcagtgggacacagaaaaccatttctgatgctccaactgacctg
gaagtgcttgactctacccccacgagtatcaccgttcgctgggccgcaccaccggtcaca
gtgcgctactacaggattactcatggagagtcaggtggtcacactaaggagtttaccgta
cctgggaccaagtccactgctacaatcagtgacctaaagcctggcactgattacaccatc
acagtttatgctgtgacaggcagaggagatagtcctgcttccagcattcccatctatgtt
acacatagaactggagtggactctccctccgaaatgcaggtgacagatgtgaatgacagc
agcattacagtgagatggagtccagcccagggtccaataaaaggatacaaggtcactggg
accccaagatatggagagggagtgtctttcactgaggtggttgccccagatcagactgag
tttactttctcaggcctgctgccgacagcagaatatatttttagtgtgaatgccctgggt
caaaacggtgaaagctctcctctggtggtgaatgctgctacaaatgtagatcgtcccaag
gaccttacctttacagacgttggttccactgccttacggatcacctgggatagcccagag
ggatttgttacgtcctaccgtgtcttgtattctagttcagaggaaggagagagagagctg
tatccggctccaagaggagatgctgagtcagctgttatccatggactccagcctggaact
gaatatacagtaaaggtcattgccgtacatggaggcacaaccagtactcctctgattggg
acgcaagctacagctatctctcctcctaccaacctccagtttactgaggttggctcaaca
tcgtttactatgagctggacttcgcctggtcaggaaaatctgataactggtcttcctggc
ctcaccgggtaccgtgtggtggtaaacccaaagaagaagagtggacccactaaagagatc
agtgtggccccggacagcacgcaggtccacatccctggactcatgactgcaacaacctat
gaagtcaatgtgtatgccttgaagaactctctcaccagcagaccaatccaaggagaggtc
accactctggaaaacatcagcccacctcggcgtgtacgtatatctgaaattaaagattcc
tccatcaccctcacttggagagcaaaggctgagacaatctctgggttcctgatcgaagcc
gcgcccatcaccgcctcttcaggctacatccccattcagaggaccatcggccctgaatcc
cgcaagtacattctggaaggtctggagcctggcactacttacaaggttaacctctacacg
ctgaagggcaacggacgaagctcgccttttgaactcactgcttccacagctcaaccaaca
gttatcccacccaccaacattcgctttacctcactgaatcctaccagcatctccttcatg
tgggagccatcactcagtcccaggatcaccggctactatgtcacttatgaggaggctggg
ggtttgcctcaagagctcattcctagacctcatgcaggccagagctccgccaccatcaat
ggtcttaaaccaggaacggagtatgttattaacattgtagcactgcagaacattttgaga
agcaaaccgcttgtgggcaaagccagaacgcaaccagccagtcatcacattttggtacct
gaactgccacaacttgctgttcctcatcggcccaccattgacattcttgatgttccagag
cgcttcaatgacaaaatttttgactcaaacaccgtccacttggcgggcacaagtggacag
acccaaccggaccagcatggtcagcacatttatacagagtaccagaacttgggcccaaat
gttggacttcctagtccctatggtggacccaaggaaggccagagaccaactctcagagag
cccctgatttatattcctgtagctggtcctgatggaaaccgagtacccctggtgtacgaa
acccctttgcctggtctagcttttggtttccctgacaacgaaacagagcttccccaagaa
gcaaagaccatgacgaccatttcatggcagcctgtccctgaaaccacagaatatgaagtg
tcctgtaaccccttaacagatctggaagaaggaggccttcagatgcgtcttccaggcacc
tccaacagcgccacgctgatcggactgacgtctggtgcgtcctacaatgttgttgtcgaa
gccgtaactgatggagacaaacagaaagttctggaagaagtcgtcactgttggaaatgca
gttccagatgaccttcctgttacccccagaggagacgtgtgctacgacacgtttacacac
acttaccatgaagtgggctctgagtgggagcgcatgtctgagactggcttcaagctgtgg
tgccgatgcatggggctcggcagcggtcactttaggtgtgattcatccaagtggtgtcat
gacaacggcaataattaccgcattggagaaaagtgggatcgccgtgctgagaacggtcat
atgatgagctgcacctgcctgggcaacggcaaaggagaattcaaatgcgaaccacatgag
tcaacttgttatgatgacggaaaaatgtaccagattggaagccagtggcagaaggactac
atgggcgctatctgtacatgtacatgctatggaggacaacagggttggcgatgcgagaac
tgcagaaggcctggaggacaaaccaacgtggaagctgaggttttgcagcctggtggctta
gatgccttccaacgctacagagaaaatgctctacgtaaactgaacatccagtgtccggtt
gaatgtttagatccagagctgctagcagatgctcagagcaacttagagtag
DBGET
integrated database retrieval system
