Cyprinodon tularosa (White Sands pupfish): 119785320
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Entry
119785320 CDS
T07496
Symbol
mgrn1b
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1b isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04120
Ubiquitin mediated proteolysis
ctul04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119785320 (mgrn1b)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
119785320 (mgrn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ctul04121
]
119785320 (mgrn1b)
Enzymes [BR:
ctul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119785320 (mgrn1b)
Ubiquitin system [BR:
ctul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119785320 (mgrn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
119785320
NCBI-ProteinID:
XP_038143827
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRFPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDSDTSLEDGGKPKVQYGV
EFTFDADARVAITLYCQAFEEFSNGMAVYSPKDPTLVSETVHYKRGVSQQFSMPSFKIDF
SEWKEEDLNFDLDRGVFPMVIQAVVDEGDDCLGHAHVLLAAFERHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCNSC
ADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQTMDHDEHSSSDSVPP
GFEPISLLEALNGLRSVSPGIPSAPLYDEINFSGGLGGDNRQLSSPEHLSDGSLQKGKVS
KSPDSTLRSPSSPIQEEDEEKLSEMSDAQPHTLLSSSPAPTDATATEDVAESLSPDDDDR
MPSGGDILQDCSSEHCSLTKTESDPTGDLSLPGSSDSTESLKSQSTNCSSQPLLCPTSSL
HMEDEHFN
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgggctccatcctgagtcgtaggattgctggtgttgaggatatcgatatccaggctaat
tcggcctatcgatttcctcctaaatctgggaattattttgcaagccatttctttatgggt
ggagagaaatttgatactcctcatccggagggatacctctttggggaaaacatggacctg
aatttccttggaaataggccagtgcagtttccatatgtgacacctgcaccccatgaacca
gtgaaaaccttgaggagtctggttaacatccggaaggactctctccgtttagtgagatac
aaagatgactcggacacctcgctggaggatggcggaaaacccaaggttcagtacggcgtg
gagtttacctttgatgctgatgccagggttgccatcactctttactgccaggcgtttgag
gagttctccaatggaatggctgtgtacagtccaaaggatccaaccttggtctctgaaacg
gttcactacaagcgaggagtgagccagcagttctccatgccctccttcaaaatagacttc
agcgagtggaaagaggaggatctaaactttgacttggacagaggagtctttcctatggtg
atccaagctgtggttgatgaaggagacgattgtcttggacacgctcatgtgcttttggca
gcattcgaaagacacgtcgatggcagtttctctgtaaagcctctgaagcaaaagcaaatt
gtggaccgtgtcagctacctcctccaggaaatctacgggattgagaacaaaaacaaccaa
gagaccaagccgtctgatgatgagaacagtgacaacagcaacgagtgtgttgtgtgtctg
tcagacctcagagacacactcatcctgccatgcagacatctgtgtctttgcaactcctgc
gccgatactctgcgctatcaggccaataactgtcccatctgcaggctgccctttagagcc
ttgctgcagatcagagctgtgaggaagaaacctggagcactatctcctgtgtccttcagt
cccgttctggctcaaaccatggaccatgatgagcactctagctcagactctgtccctcct
ggttttgaacccatttccctgctggaagctctgaacggtctgcggtcggtgtctcctggc
atcccttctgccccactgtatgatgaaatcaacttctcagggggtctgggaggcgataac
cgacagctgagctctccagagcatttaagcgacgggagtcttcagaaaggaaaagtcagc
aagtcacctgacagcactcttagatcgccatcctctcccatccaggaggaggatgaggag
aagctgtctgagatgtccgatgcgcagccacacaccctgctctccagcagccccgccccc
acagatgctacagctactgaagacgtagcagaatccctttctccagatgatgatgacaga
atgccttctggaggagacatcctgcaggactgcagcagcgagcactgcagcttaaccaaa
acagaaagcgacccgacaggcgatctgtctttacccggttcatcggattcaactgaaagt
ctaaaaagtcagagcacaaattgctccagccagcctctcctgtgtcccacgagcagcctt
cacatggaagatgaacatttcaattga
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