Cyprinodon tularosa (White Sands pupfish): 119785485
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Entry
119785485 CDS
T07496
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04517
IgSF CAM signaling
ctul04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
119785485
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119785485
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ctul04812
]
119785485
Cytoskeleton proteins [BR:
ctul04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
119785485
Intermediate filaments
Intermediate filament-binding proteins
119785485
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
NPV_P10
BORCS6
Motif
Other DBs
NCBI-GeneID:
119785485
NCBI-ProteinID:
XP_038144114
LinkDB
All DBs
Position
Unknown
AA seq
2350 aa
AA seq
DB search
MMTTMAAEFDPMELHGQYSSSDTVNNRWDDEWDNENSSARLFERSRIKALADEREAVQKK
TFTKWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGEKLPKPTKGRMRIHCLENVDK
ALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKERRSAKDA
LLLWCQMKTAGYSNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLRKSNAQHNLTTAF
NLAEQHLGITRLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAI
ETEKMVEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTE
KGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQE
KLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERV
QAVVAVAKELEVENYHDIKRIIARKDNVIRLWEYLLELLKARRQRLEMNLGLQRVFQEML
YIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQADRVKAVINNANKHSVTD
SGYKPCDPQVIQDRVAHLEFCYQELSQLAAERRARLEESRRLWKFFWEMAEEEGWIWEKE
QILSSMEHGKDLTGAVRLLSQQRALEDEMSGRAGHLQHTIAEGQAMVDAGHFAATKIQER
ISDLQAQWAALEQLAAARKKRLEEALAMHQFQADADDVDAWTLDALRIVSSGETGHDEFS
TQALVRKHKDAAAEVESYRTVIDSLHEQAALLPKEEMESEDVQGRLAGIEERYKEVSELT
KLRKQALQDALALYKMMSEANACEVWIDEKEQWLNSMEIPEKLEDLEVIQHRFENLEPEM
NSQASRVAVVNQIARQLIHSGHPSEKDIKTHQDKLNNRWSQFRDLVDQKKESLNSALGVQ
NYHLECNETKSWIKEKTKLIESTQELGNDLTGVMALQRKLTGMERDLVAIEDKLSDLQGE
AQRLAEEHPDQAKAITDRLAEITAVWEEMKNTLKTREESLGEARKLQQFLRELDDFQSWL
SRTQTAIASEDMPNTLSEAEKLMAQHEGIKNEINNYEEDYQKMRDMGEMVTQGQADAQYM
FLRQRLQALDTGWNDLLKMWENRQNLLSQSYAYQLFLRDTKQAEAFLNNQEYVLAHTEMP
TTLEGAEAAIKKQEDFMTTMDANEEKINGVLEAGRRLASDGNINAERILEKVASIDDRHK
KNREAAVELLMRLKDNRDLQKFLQDCQELSLWMSEKMLTAQDMTYDEARNLHSKWLKHQA
FMAELQSNKEWLDKIQKDGMLLVSEKPDTEAVVKEKLSSLNTLWENLESTTQTKAQCLFD
ANKAELFTQSCADLDKWLGSLEGQIQSDDYGKDLTSVNILLKKQQMLENQVDVRQREVVE
LQSQVKALGQEVKDTDEVDGRRQVVEKKFQELLEPLRRRRDFLVASREVHQFNRDVEDEI
LWAQERIPVATSKDHGHNLQTVQLLIKKNQTLQKEIQGHQPRINDIMERSQSLLKDKSSN
ADVIRQRLVELQQLWKQLMEEVEQRHGRLQEAHKAQQYYFDAAEAEAWMSEQELYMMSEE
KAKDEQSAVTMLKKHQIMEQAVEDYAETVHQLSKTSRGLVADGHPESERISMRQSQVDKL
YAGLKDLSEERRGKLDERLRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQER
FREFARDTGNIGQERVDGVNRLADELINSGHGDAATVAEWKDGLNEAWADLLELIDTRTQ
ILAASFELHKFYHDAKEILSRIADKQKKLPEEVGRDQNTVETLQRMHNTFEHDIQALGTQ
VRQLQEDAARLQSAYAGDKADDIQRREAEVLEAWRTLLEACDGRRIRLLDTGDKFRFFSM
VRDLMLWMDDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKALLA
RKHFASEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPY
LSSREMGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERRRK
PPTPEPAVVQQEEAQQQSAVTQNGLPSDQDQDSPKDVGEGGGLVNGIVERSSKEPSPSHS
PSSGRKAKNSQSSTLPAQNQDSPSQLEAFLHRKHEWEGHNKKASNRSWHNVYCVIRNQEL
GFYKDSKAASQGVPYHGELPVSLKDATCDVASDYKKKKHVFKLRISDGNEFLFQAKDEEE
MSNWIQVVLNAATTERSEVQGSNPGTPSTGRAQTLPASVSLTTESSPGKREKDKEKEKEK
RFSLFSKKKQ
NT seq
7053 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgacgatggcggccgagttcgacccgatggagctgcacgggcagtacagcagc
agcgacactgtgaacaaccgctgggacgacgaatgggacaacgagaacagctcggcgagg
ctcttcgagcgctcccgcatcaaggcgctggcagatgaacgtgaagcagtccagaagaag
accttcaccaagtgggtcaactcccacctgtccagagtctcctgcaggatcacagacctc
tacatggacctgagggatggcaggatgctcatcaagctgctggaggtcctttctggggag
aaactgccgaagcccaccaaaggcaggatgcgtattcactgcctggagaacgtggacaag
gctctgcagttcttgaaggagcagcgagttcacctggagaacatgggatctcacgacata
gtagatgggaaccaccgactaacactgggactcatctggaccatcatcctgcgcttccag
attcaggacatcagcgtggagactgaagacaacaaggaaaggcgatcggctaaagatgcc
ctgctgctgtggtgccagatgaagacggctggatactccaatgtcaacatccataacttc
accaccagttggagagacggcatggccttcaatgcactcatccataaacacagacccgat
ctgattgactttgataagctgagaaagtccaacgctcaacacaacctgacaaccgctttc
aacctggcagagcagcatctgggcatcaccaggctgctggacccggaagacatcagcgtg
gaccatcccgacgagaagtctgtcatcacctacgttgtgacctattaccactacttctcc
aagatgaaggctctgaaggtggagggcaaacgaattgggaaggtgttggataacgccatt
gagactgagaagatggttgagaagtacgagtcactggcttctgacctgctggagtggatc
gaacagaccatcatcatccttaacaacagaaagtttgccaactctctggtgggagtccag
cagcaactacaggcttttaacacctaccgaacagtggagaaacctcccaagttcacagag
aagggaaacctggaggttctgctcttcaccattcagagtaagatgagagccaacaaccag
aaggtctacatgccccgcgagggaaaacttatctcagacatcaacaaggcctgggaaaga
ctggaaaaagcagagcatgagagggagctggctctgcggacggagctgattcgtcaggaa
aaactagagcagctcgctagacgctttgaccgcaaggcggccatgagggagacctggctc
agtgaaaaccagaggctggtgtctcaggataactttggcttcgacctccaagccgtggag
gccgccaccaaaaagcacgaggccatcgagacagacatcgcagcgtatgaggaacgcgtc
caggctgtggtcgccgtggcgaaggagctggaggtggagaattaccacgacattaaacgc
atcatagccaggaaggacaacgtgatccggctctgggagtacctgttggagctgctaaag
gcccgcagacagagactggagatgaacctgggcctacagagagtctttcaggagatgctc
tacatcatggactggatggatgagatgaagatgctgctgctgtctcaggattacgggaag
catctgttgggagtggaagacctgctacagaaacatgcactggtggaagccgacatcgcc
atccaggccgacagagtgaaggccgtcatcaacaacgccaacaagcactcggtgactgac
agtggctacaagccctgcgatcctcaggtcatccaggaccgggtggcccacttggagttc
tgctaccaggagttgtcacagctggctgccgaacgtcgtgcccgtcttgaagagtctcgg
cgactgtggaagttcttctgggagatggcggaggaagagggctggatctgggagaaggaa
cagatcctgtcctccatggagcatggtaaggacctgaccggggcggtgcgactcctgagc
caacagagggcacttgaagatgagatgagtggacgagctggacacctgcaacacaccatc
gcagagggccaggccatggttgatgctggtcactttgccgccacaaagatccaggagcgt
atctcagacctgcaggctcagtgggcagctctggagcagcttgcggcagcaagaaagaag
agactggaagaagctctggctatgcaccagtttcaggctgatgcagacgatgttgatgcc
tggacactggatgctctgcgtattgtctccagtggagagacaggccacgatgaattctcc
acccaggctctggtcaggaagcacaaggacgcagcggcggaggttgaaagctaccgtacg
gtcatcgactctctgcatgaacaggctgccctgctgcccaaagaggagatggagtcagag
gatgtgcaaggacgattggctggtatcgaggagcgctacaaggaagtgtcagagctgacg
aagctgaggaagcaagccctgcaggatgcgctggctctttacaaaatgatgagtgaggcc
aatgcctgcgaggtttggattgacgagaaggagcagtggttgaacagcatggagattcct
gaaaagctggaggacctggaggtgatacagcacaggtttgagaatctggagccagagatg
aacagccaggcgtctcgggttgctgtggtgaaccagatcgcccgacagctgattcacagt
ggccatccaagcgagaaggacatcaagacccaccaggataaactaaataataggtggagc
cagttccgagacctggtggaccagaagaaggagtccctgaactccgccctgggtgtacag
aactaccaccttgaatgcaatgagaccaagtcttggatcaaagaaaagaccaaactaata
gagtctacccaagaactgggaaatgacctcaccggggtcatggctctgcagaggaaattg
accggcatggagcgagacttggtggcaatcgaagacaagcttagtgatctgcaaggtgaa
gcccaaaggctggccgaggagcaccctgaccaggctaaagccatcacagaccggctggct
gagattactgccgtctgggaggaaatgaagaataccctgaaaacgcgagaggagtccctg
ggcgaagcccggaagcttcagcagttcctgcgtgagctcgacgacttccagtcctggctg
tctcgtactcagacagccatcgcgtccgaagacatgcccaacacattgtccgaggccgag
aagctgatggcacaacatgaaggtataaaaaatgagatcaataactacgaagaggactat
cagaagatgcgagacatgggggagatggtgacgcagggccaagcggatgcgcagtacatg
ttcttgcggcagcgactgcaggcactggacacgggctggaacgacctgctcaaaatgtgg
gagaatcgtcagaatctgctgtcccagtcttacgcttaccagctgttcctaagggacacc
aagcaggcggaggctttcctcaacaaccaagagtatgttctggctcatacagagatgcca
accacgctggagggcgctgaggctgcaatcaagaagcaggaggacttcatgacaacgatg
gatgccaatgaggagaagatcaacggtgtgttggaggcaggcagaaggctggcgagtgat
gggaacatcaatgctgagcgcatccttgagaaggtggcctccatcgatgacaggcataag
aagaacagggaggctgcggtggagttgctgatgaggctgaaggacaaccgcgatcttcag
aagtttctgcaagactgccaggagctgtctttatggatgagtgagaagatgctgacggcc
caggacatgacctatgacgaggccaggaacctgcatagcaagtggctgaagcaccaggcc
ttcatggctgagctgcagtccaacaaagagtggctagacaagatccagaaggatgggatg
ctgctggtgtcagagaagccagatacagaggctgtggtgaaggaaaagctttcctcgctc
aacaccttgtgggaaaacctggagtccacgacgcagaccaaagctcagtgtctgtttgat
gccaacaaggccgagctgtttacgcagagctgtgctgacctggacaagtggctgggcagc
ctggaagggcagatccagtccgacgattacggcaaagacctgacatccgtcaacatcctg
ttgaagaaacagcagatgctagagaaccaggtggatgtgcgtcagagggaggtggtggag
ttgcagagtcaagtgaaggcgctcggtcaggaggtgaaggacacggatgaggtggacgga
cgaaggcaggtggtggaaaagaagttccaggagcttctggagccgctgcggcgtcgcagg
gacttcctggtggcatccagagaggtccatcagttcaaccgcgacgtggaggatgagatc
ctctgggctcaggaacggatccctgtagctacatccaaggaccatggacacaacctgcag
acagtccagctgcttataaagaagaaccagacgctccagaaggaaatccaaggacatcag
cctcgcatcaatgacatcatggagcgcagccagagcctcttgaaggacaagtcctccaat
gctgatgtgatccgacagcgcctggtggaactgcagcagctgtggaagcagctgatggag
gaggtggagcagcggcacggccggctgcaggaggcccacaaagcccagcagtactacttc
gacgccgcagaggctgaggcatggatgagcgaacaggaactctacatgatgtcagaggaa
aaagctaaggatgagcagagcgctgtcaccatgctaaagaagcatcagatcatggagcag
gctgtggaggactatgcagagaccgtccaccagctgtccaagaccagccgaggacttgtg
gccgacggacaccctgaaagcgagcggatcagcatgcggcagtctcaggtggacaagctg
tacgccggcctgaaggacctgtctgaggagaggcggggaaagctggatgagaggctccgc
cttttccaactgaacagggaggtggacgacctggagcaatggattgcagagcgagaggtg
gtggccgggtcgcacgagctgggtcaggattacgaacatgtcacgatgctgcaggaacgt
ttccgggagtttgcacgggacactgggaacatcggacaggagcgggtggacggcgtgaac
cggctggcagacgagttaatcaacagcgggcacggagatgctgccacggtggcggagtgg
aaggacggactgaacgaggcctgggctgacctgctcgagctcatcgacactcggacacag
attctggccgcctccttcgagctccacaaattctaccacgatgccaaggagatcctgtca
cgcatcgccgacaagcagaagaagctgccggaagaggtcggccgggaccagaacacggtg
gagacgctacagaggatgcacaacaccttcgaacacgacatccaggcgctgggaacacag
gtgaggcagcttcaggaggacgccgcgcgcctacagtctgcatatgccggagacaaagct
gacgacatccagcgccgggaggctgaggtgctggaggcttggaggaccctgctggaggcc
tgcgatggacgcaggatccgcctcctcgacaccggagacaagttccgattcttcagcatg
gtgcgggacctgatgctctggatggacgacgtgatccggctcatcgaagcccaggagaaa
cccagagacgtttcctcagtggaactgctgatgaacaaccatcagggaatcaaggcagag
atcgacgcccgcaacgacagcttcaccacctgcatcgagctgggcaaagccctgctggcc
aggaagcacttcgcttcagaagagatcaaggagaagctgctgcaactcaccgataagagg
aaagagatgatcgataagtgggaggatcgctgggagtggctccgcctcatcctggaggtc
caccagttctcgcgagacgctggagtggccgaggcctggctgctgggccaggagccgtac
ctgtccagcagggagatgggccagagcgtggacgaggtagagaagctcatcaagcgccat
gaggcctttgagaagtccgccgccacctgggaggagcgcttctctgccctggagaggctg
accacgctggagctgctggaagtaagaagacagcaggaggaggaggagaggaggaggaag
cccccgactcctgagccggccgtggtccagcaggaggaagctcagcagcagagcgctgtc
actcagaatggactcccatcggatcaggatcaagactctcctaaggatgtcggggaaggt
ggcggtctggtcaacgggattgtcgagcgcagctccaaggagccgagccccagccactcg
ccatcctcgggacggaaggccaaaaacagccagtcctccacgctgcccgcccagaaccag
gactcaccctcacagctcgaagctttcctgcatcgcaaacacgagtgggaggggcacaat
aagaaagcctccaacaggtcctggcacaacgtgtactgcgtcatcagaaaccaggaactg
ggcttctacaaggacagcaaggcggcaagtcagggcgtgccgtaccacggcgagctgccc
gtcagcctgaaagacgccacctgtgatgtcgcatcagactataaaaagaaaaaacacgtc
ttcaagctcagaatctctgatggaaacgagttcctgttccaagccaaagatgaagaggag
atgagtaactggatccaggttgtcctaaacgccgccaccactgagcgatccgaagtccag
ggcagtaaccccggcacgccgtccaccgggcgcgctcagacgctcccggccagcgtgtcg
ctcaccaccgagtccagtcctggaaagagagagaaggacaaggagaaggagaaagaaaaa
cggttcagcttgttcagcaagaagaagcagtag
DBGET
integrated database retrieval system
