Cyprinodon tularosa (White Sands pupfish): 119785485
Help
Entry
119785485 CDS
T07496
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119785485
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ctul04812
]
119785485
Cytoskeleton proteins [BR:
ctul04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
119785485
Intermediate filaments
Intermediate filament-binding proteins
119785485
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_11
CAMSAP_CH
WHD_MCM8
NPV_P10
BORCS6
Motif
Other DBs
NCBI-GeneID:
119785485
NCBI-ProteinID:
XP_038144114
LinkDB
All DBs
Position
Unknown
AA seq
2350 aa
AA seq
DB search
MMTTMAAEFDPMELHGQYSSSDTVNNRWDDEWDNENSSARLFERSRIKALADEREAVQKK
TFTKWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGEKLPKPTKGRMRIHCLENVDK
ALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKERRSAKDA
LLLWCQMKTAGYSNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLRKSNAQHNLTTAF
NLAEQHLGITRLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAI
ETEKMVEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTE
KGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQE
KLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERV
QAVVAVAKELEVENYHDIKRIIARKDNVIRLWEYLLELLKARRQRLEMNLGLQRVFQEML
YIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQADRVKAVINNANKHSVTD
SGYKPCDPQVIQDRVAHLEFCYQELSQLAAERRARLEESRRLWKFFWEMAEEEGWIWEKE
QILSSMEHGKDLTGAVRLLSQQRALEDEMSGRAGHLQHTIAEGQAMVDAGHFAATKIQER
ISDLQAQWAALEQLAAARKKRLEEALAMHQFQADADDVDAWTLDALRIVSSGETGHDEFS
TQALVRKHKDAAAEVESYRTVIDSLHEQAALLPKEEMESEDVQGRLAGIEERYKEVSELT
KLRKQALQDALALYKMMSEANACEVWIDEKEQWLNSMEIPEKLEDLEVIQHRFENLEPEM
NSQASRVAVVNQIARQLIHSGHPSEKDIKTHQDKLNNRWSQFRDLVDQKKESLNSALGVQ
NYHLECNETKSWIKEKTKLIESTQELGNDLTGVMALQRKLTGMERDLVAIEDKLSDLQGE
AQRLAEEHPDQAKAITDRLAEITAVWEEMKNTLKTREESLGEARKLQQFLRELDDFQSWL
SRTQTAIASEDMPNTLSEAEKLMAQHEGIKNEINNYEEDYQKMRDMGEMVTQGQADAQYM
FLRQRLQALDTGWNDLLKMWENRQNLLSQSYAYQLFLRDTKQAEAFLNNQEYVLAHTEMP
TTLEGAEAAIKKQEDFMTTMDANEEKINGVLEAGRRLASDGNINAERILEKVASIDDRHK
KNREAAVELLMRLKDNRDLQKFLQDCQELSLWMSEKMLTAQDMTYDEARNLHSKWLKHQA
FMAELQSNKEWLDKIQKDGMLLVSEKPDTEAVVKEKLSSLNTLWENLESTTQTKAQCLFD
ANKAELFTQSCADLDKWLGSLEGQIQSDDYGKDLTSVNILLKKQQMLENQVDVRQREVVE
LQSQVKALGQEVKDTDEVDGRRQVVEKKFQELLEPLRRRRDFLVASREVHQFNRDVEDEI
LWAQERIPVATSKDHGHNLQTVQLLIKKNQTLQKEIQGHQPRINDIMERSQSLLKDKSSN
ADVIRQRLVELQQLWKQLMEEVEQRHGRLQEAHKAQQYYFDAAEAEAWMSEQELYMMSEE
KAKDEQSAVTMLKKHQIMEQAVEDYAETVHQLSKTSRGLVADGHPESERISMRQSQVDKL
YAGLKDLSEERRGKLDERLRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQER
FREFARDTGNIGQERVDGVNRLADELINSGHGDAATVAEWKDGLNEAWADLLELIDTRTQ
ILAASFELHKFYHDAKEILSRIADKQKKLPEEVGRDQNTVETLQRMHNTFEHDIQALGTQ
VRQLQEDAARLQSAYAGDKADDIQRREAEVLEAWRTLLEACDGRRIRLLDTGDKFRFFSM
VRDLMLWMDDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKALLA
RKHFASEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPY
LSSREMGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERRRK
PPTPEPAVVQQEEAQQQSAVTQNGLPSDQDQDSPKDVGEGGGLVNGIVERSSKEPSPSHS
PSSGRKAKNSQSSTLPAQNQDSPSQLEAFLHRKHEWEGHNKKASNRSWHNVYCVIRNQEL
GFYKDSKAASQGVPYHGELPVSLKDATCDVASDYKKKKHVFKLRISDGNEFLFQAKDEEE
MSNWIQVVLNAATTERSEVQGSNPGTPSTGRAQTLPASVSLTTESSPGKREKDKEKEKEK
RFSLFSKKKQ
NT seq
7053 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgacgatggcggccgagttcgacccgatggagctgcacgggcagtacagcagc
agcgacactgtgaacaaccgctgggacgacgaatgggacaacgagaacagctcggcgagg
ctcttcgagcgctcccgcatcaaggcgctggcagatgaacgtgaagcagtccagaagaag
accttcaccaagtgggtcaactcccacctgtccagagtctcctgcaggatcacagacctc
tacatggacctgagggatggcaggatgctcatcaagctgctggaggtcctttctggggag
aaactgccgaagcccaccaaaggcaggatgcgtattcactgcctggagaacgtggacaag
gctctgcagttcttgaaggagcagcgagttcacctggagaacatgggatctcacgacata
gtagatgggaaccaccgactaacactgggactcatctggaccatcatcctgcgcttccag
attcaggacatcagcgtggagactgaagacaacaaggaaaggcgatcggctaaagatgcc
ctgctgctgtggtgccagatgaagacggctggatactccaatgtcaacatccataacttc
accaccagttggagagacggcatggccttcaatgcactcatccataaacacagacccgat
ctgattgactttgataagctgagaaagtccaacgctcaacacaacctgacaaccgctttc
aacctggcagagcagcatctgggcatcaccaggctgctggacccggaagacatcagcgtg
gaccatcccgacgagaagtctgtcatcacctacgttgtgacctattaccactacttctcc
aagatgaaggctctgaaggtggagggcaaacgaattgggaaggtgttggataacgccatt
gagactgagaagatggttgagaagtacgagtcactggcttctgacctgctggagtggatc
gaacagaccatcatcatccttaacaacagaaagtttgccaactctctggtgggagtccag
cagcaactacaggcttttaacacctaccgaacagtggagaaacctcccaagttcacagag
aagggaaacctggaggttctgctcttcaccattcagagtaagatgagagccaacaaccag
aaggtctacatgccccgcgagggaaaacttatctcagacatcaacaaggcctgggaaaga
ctggaaaaagcagagcatgagagggagctggctctgcggacggagctgattcgtcaggaa
aaactagagcagctcgctagacgctttgaccgcaaggcggccatgagggagacctggctc
agtgaaaaccagaggctggtgtctcaggataactttggcttcgacctccaagccgtggag
gccgccaccaaaaagcacgaggccatcgagacagacatcgcagcgtatgaggaacgcgtc
caggctgtggtcgccgtggcgaaggagctggaggtggagaattaccacgacattaaacgc
atcatagccaggaaggacaacgtgatccggctctgggagtacctgttggagctgctaaag
gcccgcagacagagactggagatgaacctgggcctacagagagtctttcaggagatgctc
tacatcatggactggatggatgagatgaagatgctgctgctgtctcaggattacgggaag
catctgttgggagtggaagacctgctacagaaacatgcactggtggaagccgacatcgcc
atccaggccgacagagtgaaggccgtcatcaacaacgccaacaagcactcggtgactgac
agtggctacaagccctgcgatcctcaggtcatccaggaccgggtggcccacttggagttc
tgctaccaggagttgtcacagctggctgccgaacgtcgtgcccgtcttgaagagtctcgg
cgactgtggaagttcttctgggagatggcggaggaagagggctggatctgggagaaggaa
cagatcctgtcctccatggagcatggtaaggacctgaccggggcggtgcgactcctgagc
caacagagggcacttgaagatgagatgagtggacgagctggacacctgcaacacaccatc
gcagagggccaggccatggttgatgctggtcactttgccgccacaaagatccaggagcgt
atctcagacctgcaggctcagtgggcagctctggagcagcttgcggcagcaagaaagaag
agactggaagaagctctggctatgcaccagtttcaggctgatgcagacgatgttgatgcc
tggacactggatgctctgcgtattgtctccagtggagagacaggccacgatgaattctcc
acccaggctctggtcaggaagcacaaggacgcagcggcggaggttgaaagctaccgtacg
gtcatcgactctctgcatgaacaggctgccctgctgcccaaagaggagatggagtcagag
gatgtgcaaggacgattggctggtatcgaggagcgctacaaggaagtgtcagagctgacg
aagctgaggaagcaagccctgcaggatgcgctggctctttacaaaatgatgagtgaggcc
aatgcctgcgaggtttggattgacgagaaggagcagtggttgaacagcatggagattcct
gaaaagctggaggacctggaggtgatacagcacaggtttgagaatctggagccagagatg
aacagccaggcgtctcgggttgctgtggtgaaccagatcgcccgacagctgattcacagt
ggccatccaagcgagaaggacatcaagacccaccaggataaactaaataataggtggagc
cagttccgagacctggtggaccagaagaaggagtccctgaactccgccctgggtgtacag
aactaccaccttgaatgcaatgagaccaagtcttggatcaaagaaaagaccaaactaata
gagtctacccaagaactgggaaatgacctcaccggggtcatggctctgcagaggaaattg
accggcatggagcgagacttggtggcaatcgaagacaagcttagtgatctgcaaggtgaa
gcccaaaggctggccgaggagcaccctgaccaggctaaagccatcacagaccggctggct
gagattactgccgtctgggaggaaatgaagaataccctgaaaacgcgagaggagtccctg
ggcgaagcccggaagcttcagcagttcctgcgtgagctcgacgacttccagtcctggctg
tctcgtactcagacagccatcgcgtccgaagacatgcccaacacattgtccgaggccgag
aagctgatggcacaacatgaaggtataaaaaatgagatcaataactacgaagaggactat
cagaagatgcgagacatgggggagatggtgacgcagggccaagcggatgcgcagtacatg
ttcttgcggcagcgactgcaggcactggacacgggctggaacgacctgctcaaaatgtgg
gagaatcgtcagaatctgctgtcccagtcttacgcttaccagctgttcctaagggacacc
aagcaggcggaggctttcctcaacaaccaagagtatgttctggctcatacagagatgcca
accacgctggagggcgctgaggctgcaatcaagaagcaggaggacttcatgacaacgatg
gatgccaatgaggagaagatcaacggtgtgttggaggcaggcagaaggctggcgagtgat
gggaacatcaatgctgagcgcatccttgagaaggtggcctccatcgatgacaggcataag
aagaacagggaggctgcggtggagttgctgatgaggctgaaggacaaccgcgatcttcag
aagtttctgcaagactgccaggagctgtctttatggatgagtgagaagatgctgacggcc
caggacatgacctatgacgaggccaggaacctgcatagcaagtggctgaagcaccaggcc
ttcatggctgagctgcagtccaacaaagagtggctagacaagatccagaaggatgggatg
ctgctggtgtcagagaagccagatacagaggctgtggtgaaggaaaagctttcctcgctc
aacaccttgtgggaaaacctggagtccacgacgcagaccaaagctcagtgtctgtttgat
gccaacaaggccgagctgtttacgcagagctgtgctgacctggacaagtggctgggcagc
ctggaagggcagatccagtccgacgattacggcaaagacctgacatccgtcaacatcctg
ttgaagaaacagcagatgctagagaaccaggtggatgtgcgtcagagggaggtggtggag
ttgcagagtcaagtgaaggcgctcggtcaggaggtgaaggacacggatgaggtggacgga
cgaaggcaggtggtggaaaagaagttccaggagcttctggagccgctgcggcgtcgcagg
gacttcctggtggcatccagagaggtccatcagttcaaccgcgacgtggaggatgagatc
ctctgggctcaggaacggatccctgtagctacatccaaggaccatggacacaacctgcag
acagtccagctgcttataaagaagaaccagacgctccagaaggaaatccaaggacatcag
cctcgcatcaatgacatcatggagcgcagccagagcctcttgaaggacaagtcctccaat
gctgatgtgatccgacagcgcctggtggaactgcagcagctgtggaagcagctgatggag
gaggtggagcagcggcacggccggctgcaggaggcccacaaagcccagcagtactacttc
gacgccgcagaggctgaggcatggatgagcgaacaggaactctacatgatgtcagaggaa
aaagctaaggatgagcagagcgctgtcaccatgctaaagaagcatcagatcatggagcag
gctgtggaggactatgcagagaccgtccaccagctgtccaagaccagccgaggacttgtg
gccgacggacaccctgaaagcgagcggatcagcatgcggcagtctcaggtggacaagctg
tacgccggcctgaaggacctgtctgaggagaggcggggaaagctggatgagaggctccgc
cttttccaactgaacagggaggtggacgacctggagcaatggattgcagagcgagaggtg
gtggccgggtcgcacgagctgggtcaggattacgaacatgtcacgatgctgcaggaacgt
ttccgggagtttgcacgggacactgggaacatcggacaggagcgggtggacggcgtgaac
cggctggcagacgagttaatcaacagcgggcacggagatgctgccacggtggcggagtgg
aaggacggactgaacgaggcctgggctgacctgctcgagctcatcgacactcggacacag
attctggccgcctccttcgagctccacaaattctaccacgatgccaaggagatcctgtca
cgcatcgccgacaagcagaagaagctgccggaagaggtcggccgggaccagaacacggtg
gagacgctacagaggatgcacaacaccttcgaacacgacatccaggcgctgggaacacag
gtgaggcagcttcaggaggacgccgcgcgcctacagtctgcatatgccggagacaaagct
gacgacatccagcgccgggaggctgaggtgctggaggcttggaggaccctgctggaggcc
tgcgatggacgcaggatccgcctcctcgacaccggagacaagttccgattcttcagcatg
gtgcgggacctgatgctctggatggacgacgtgatccggctcatcgaagcccaggagaaa
cccagagacgtttcctcagtggaactgctgatgaacaaccatcagggaatcaaggcagag
atcgacgcccgcaacgacagcttcaccacctgcatcgagctgggcaaagccctgctggcc
aggaagcacttcgcttcagaagagatcaaggagaagctgctgcaactcaccgataagagg
aaagagatgatcgataagtgggaggatcgctgggagtggctccgcctcatcctggaggtc
caccagttctcgcgagacgctggagtggccgaggcctggctgctgggccaggagccgtac
ctgtccagcagggagatgggccagagcgtggacgaggtagagaagctcatcaagcgccat
gaggcctttgagaagtccgccgccacctgggaggagcgcttctctgccctggagaggctg
accacgctggagctgctggaagtaagaagacagcaggaggaggaggagaggaggaggaag
cccccgactcctgagccggccgtggtccagcaggaggaagctcagcagcagagcgctgtc
actcagaatggactcccatcggatcaggatcaagactctcctaaggatgtcggggaaggt
ggcggtctggtcaacgggattgtcgagcgcagctccaaggagccgagccccagccactcg
ccatcctcgggacggaaggccaaaaacagccagtcctccacgctgcccgcccagaaccag
gactcaccctcacagctcgaagctttcctgcatcgcaaacacgagtgggaggggcacaat
aagaaagcctccaacaggtcctggcacaacgtgtactgcgtcatcagaaaccaggaactg
ggcttctacaaggacagcaaggcggcaagtcagggcgtgccgtaccacggcgagctgccc
gtcagcctgaaagacgccacctgtgatgtcgcatcagactataaaaagaaaaaacacgtc
ttcaagctcagaatctctgatggaaacgagttcctgttccaagccaaagatgaagaggag
atgagtaactggatccaggttgtcctaaacgccgccaccactgagcgatccgaagtccag
ggcagtaaccccggcacgccgtccaccgggcgcgctcagacgctcccggccagcgtgtcg
ctcaccaccgagtccagtcctggaaagagagagaaggacaaggagaaggagaaagaaaaa
cggttcagcttgttcagcaagaagaagcagtag
DBGET
integrated database retrieval system
