Cyprinodon tularosa (White Sands pupfish): 119785731
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Entry
119785731 CDS
T07496
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119785731 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctul03019
]
119785731 (exosc5)
Messenger RNA biogenesis [BR:
ctul03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
119785731 (exosc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
119785731
NCBI-ProteinID:
XP_038144423
LinkDB
All DBs
Position
Unknown
AA seq
236 aa
AA seq
DB search
MTSFSCDSHSLHRESSMMEVSPSENVSLREFGCEQTLLSRPDGSASFVQGDTSVMAGVYG
PAEVKVSKEIYDRATLEVLVYPKVGLPGVRERSQEQCVRETCEASLFLSLHPRSSLTLIL
QVLHDAGSLLSCCLNAACMALMDAGLSMSCLFCGVTCAISTEGEIITDPTAAQEKESRAL
MTFAIDSKEHRVMMSSTRGSFSVQELQQCIAISQKASEKIFQFYRDSVRRRYSKNL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcatttagctgcgacagtcacagtctccaccgtgaaagcagcatgatggaagtc
tctccttctgaaaatgtttctctcagggagttcggttgtgaacagaccttactctctcgt
ccggatggatcggcctcttttgttcaaggcgataccagtgtgatggctggagtgtacgga
cccgctgaggtgaaagtcagcaaagagatctatgacagagcaaccctggaggtcctagtt
tatcctaaagttggacttcctggtgtgagggaacgatcccaggagcagtgcgtacgcgaa
acctgtgaggcatctctttttttatctcttcatcctcgttcctcgctcacactcatccta
caagtgctacacgatgctggatcactcctgtcctgctgtctaaatgcagcctgcatggcc
ctgatggatgcaggcttgtctatgagttgcttgttttgtggagtgacttgtgccatcagt
acagaaggtgaaatcataacagacccaactgcagctcaggagaaggaaagtcgagcgttg
atgacttttgccatcgacagcaaagaacacagagtaatgatgtcatcaacccgaggctcg
ttttcagttcaagagctgcagcagtgtatagccattagtcagaaagcatcggagaagatc
ttccagttctacagagactcagtgaggcggcggtactccaagaacctctaa
DBGET
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