KEGG   Cyprinodon tularosa (White Sands pupfish): 119785817
Entry
119785817         CDS       T07496                                 
Symbol
smarcc1b
Name
(RefSeq) SWI/SNF complex subunit SMARCC1b
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ctul  Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:ctul00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    119785817 (smarcc1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ctul03021]
    119785817 (smarcc1b)
   03036 Chromosome and associated proteins [BR:ctul03036]
    119785817 (smarcc1b)
Transcription machinery [BR:ctul03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     119785817 (smarcc1b)
Chromosome and associated proteins [BR:ctul03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    119785817 (smarcc1b)
   PBAF complex
    119785817 (smarcc1b)
   GBAF(ncBAF) complex
    119785817 (smarcc1b)
SSDB
Motif
Pfam: SWIRM-assoc_2 SWIRM-assoc_1 SWIRM Myb_DNA-binding SWIRM-assoc_3 Myb_DNA-bind_6 SpeFL DUF919
Other DBs
NCBI-GeneID: 119785817
NCBI-ProteinID: XP_038144566
LinkDB
Position
Unknown
AA seq 940 aa
MSGGTHPGFPGTSQALAHRKKDSSPSARFWECPDTLAQLEVVRQWIGKHYKKYVLVDAPS
CQVLAAVTLQLLQFQEDAFGRQAPDPAITKLPAHCFLELQPGGGLCHILGTAYKFKVEQG
WRRFDLQNPSRTERNVEMFVAIEKALIQNNCISLPLVFIDPAVDVELSSRLVGIIIKHKG
AITEDRIMASHHVYGSLASTEEDEWMRPVMRKDKHVLVHWGMHPDSYDSWLSSSDVEGDV
EELPHLERPWRVNAGWILDTDVFNEWMNEEDYYVNERNVPLILRQRIHLKEDQDSKSTPS
KKRRRSPSPSTDGRKKGKKGRRRGQQEEEPEEDLTKDMEDPTPVPNMEEVILPKNVNLKK
DSENTPVKGGIMADLDDQDDDFPGREEDEGRSEIPRLLEGEENITEQTHHIIIPSYTSWF
NYNSIHSIEKRALPEFFNSKNKSKTPEIFLAYRNFMIDTYRLNPQEYLSSTSCRRNLTGD
VCALIRVHAFLEQWGLINYQVDAESRPLPMGPPPTPHFNVLADTPSGLAPLQHKPLQVSA
SQHMLNFPEKNREKPSDCQNFGLRTDIYARKHPKTKGANAGREWTEQETLLLLEALEVYR
DDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSSASLGPLAYQPVPFSQSENPVMSTV
AFLASVVDPRVASAAAKAALEEFSKAQEDALYKISDPSFQPEQTDTMEAENLDSNSHQGP
VRMDGVKMEPGMSKVEGDKVKREHGESMLGDEGDGRGEDGENRREGEGDDGKRMMELELV
EGSVSTAAAAALSSAASKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMD
REKEALEQQRQQLLTERQTFHTEQLKQAEMKVRQQREQHGQAGYTIQHSGQSVANRMVPG
GGNAQTMAPRHSGAPNGMYPSSQPDGIASAQPTPPSSSHS
NT seq 2823 nt   +upstreamnt  +downstreamnt
atgtccggaggaacacaccccggctttccggggacaagccaagcattggctcaccgtaaa
aaagacagcagtccttcggctcggttttgggagtgtccggacactttagcccagctggag
gtggtgcggcagtggatcgggaagcactacaaaaagtatgtgttggtggatgctccatct
tgccaggtcctggctgcagtcaccttgcagcttctccagtttcaggaggatgcttttggc
agacaagctccagaccctgcaatcacaaagctaccagcccattgcttcctggaattgcaa
ccaggtggaggactatgtcacatccttggcactgcttacaaattcaaggttgagcagggc
tggagaaggtttgacctccagaatccatcaagaactgagagaaatgtagagatgtttgtt
gcaattgaaaaagctctaatccagaacaactgtatatcgctgcctctggttttcattgat
cctgctgttgatgtggagctgtccagtaggctcgttggtattatcatcaaacacaagggg
gcaattactgaggacaggataatggccagtcatcacgtatacggctcacttgcttctaca
gaggaggatgagtggatgcgtcctgttatgcgaaaggataaacacgttttggtccactgg
ggcatgcaccctgacagttatgacagctggctgtcctcaagtgatgtggaaggagacgtg
gaagagctgccacacttagaaaggccatggagggttaatgcaggttggatcctggacaca
gacgtgtttaatgagtggatgaatgaagaggactactatgtgaatgagagaaatgtgcca
ctcatccttcgacagcgaatccaccttaaagaggatcaggactctaagtccacaccatcc
aaaaagaggaggcgttcgccctctccatccactgatggcaggaaaaaaggaaaaaaaggg
agaaggcggggccaacaggaagaggagccagaggaggacctgaccaaagacatggaagac
ccaacgccagtgccaaacatggaggaagtcattctcccaaagaatgtgaacctgaagaaa
gatagtgagaatacaccagtaaagggaggcatcatggctgatcttgatgatcaggatgat
gattttcctggaagggaagaagatgagggaagaagtgaaattcctcgcctattagaggga
gaggaaaatatcacagagcaaactcatcacatcataataccaagctacacatcatggttc
aattataacagcattcactccatagagaaacgggctcttcctgaattcttcaacagcaag
aacaaatccaaaaccccagaaatcttcctggcatatcgtaacttcatgatagacacatac
agactcaacccgcaagaatacctcagctctacgtcctgcaggcgaaacctgacaggagac
gtctgtgctcttataagggttcatgcatttttagagcagtgggggttgatcaactaccaa
gtggatgcagagagccgacctctccctatgggacctcctccaacacctcattttaatgtt
cttgccgacacaccatctgggctagcccccctgcagcacaagccgcttcaggtttccgcc
tcgcagcacatgttgaatttcccagagaagaacagagagaaaccttcagactgccagaac
tttggtctgcgcaccgacatctatgccaggaaacatccaaagactaaaggagcaaatgca
ggacgagaatggacagagcaggagacattgttactgttggaggccttagaagtctacaga
gacgactggaacaaagtatcagagcatgttggctccagaacacaggatgaatgcatccta
cactttctacgtttgcccattgaggacccttacctggaggactcgtctgcctctcttggc
ccactggcatatcagcctgtacctttcagccaatcagaaaaccccgttatgagcactgtg
gccttcctggcgtctgtggtagatccgcgtgtggcttcggctgcagcgaaggcagcactg
gaggagttctcaaaagcacaggaggatgcgctgtataaaatttctgacccctccttccag
ccagaacagacagatacaatggaagctgaaaatctggactccaactcccatcagggtcct
gtaagaatggatggagtcaaaatggagcctggcatgtcaaaagtggagggggataaagtt
aaaagagaacatggagaaagtatgttgggagacgaaggcgatggcaggggagaagatggt
gagaacaggcgggagggagaaggagatgatggaaagaggatgatggagctggagctggtg
gagggaagtgtttccacggcagcagcggctgctctatcatctgctgcctcaaaggccaag
cacttagcagctgtagaagagagaaagatcaagtccctggtggctctactggtggagaca
cagatgaagaagctggagatcaaactgagacattttgaagagctggaaaccatcatggac
agagagaaggaggctttggagcagcagcgccaacagttgctgacggagagacagactttc
catactgagcaactaaaacaggcagagatgaaggttcgccagcaaagggagcagcacggt
caggcgggttacacgatccaacattcaggccaatctgtggccaacagaatggtacctggt
ggaggaaacgcacagacaatggcccctcgacactccggagctccaaatggaatgtacccg
tcgtcacaacctgatggaatagcatctgctcagcccacccctccatcatccagtcacagc
tga

DBGET integrated database retrieval system