Cyprinodon tularosa (White Sands pupfish): 119785885
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Entry
119785885 CDS
T07496
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctul04131
]
119785885 (vps50)
Membrane trafficking [BR:
ctul04131
]
Protein recycling
Others
EARP complex
119785885 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
119785885
NCBI-ProteinID:
XP_038144695
LinkDB
All DBs
Position
Unknown
AA seq
992 aa
AA seq
DB search
MQKIKSLMTRQGLKSPQESMADLSPVENPRIHSTEELRELRQQPIDPQAEQEIIDSIEEV
YFSSDSFDMVQHELEKLPPELNLQELEEHRDKLKRQQAAVSKRVADLILEKQPSYVKELE
RVTALQTNLQLAAVICTNARRQLRVAKEEFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHLDVLHYTKVQKAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITLDSYIPCLTDLCKALWEVMLSYHRTMQWHEEHDKQKAAPSQDD
SAAEPDELNVDRSYVKKKLEHGLTRIWQDVQLKVKVYILGTDMSNFKYDDFIVVLDVISR
LMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRARLEELRMFLENETWELCPVKSNFNIS
QLHEFKFMGQCRSPSVSPSRQAASSVPPALEELSLFQQYHQDGNPFEMHIENKEEETEDV
LASNGYESDELEKSVYQDYDSDSDVPDELKQDFVDEQTGDVPLKSVSRETIRSKKKSDYN
LCKASAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRND
MPIPSPSLPTYSGREAVPARVVGPACLYESSGLGLISSRLRTTLNRIQESLIDMDPVGET
VGVHGPPEDRKEKVPIPHLSQMVVLTDSGTLYGLAQRVVATESLVFLAEQFESLQSHLDT
MMPAAKKPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLMMAGVKWDIKEIMSQH
NVYVDVLLKEFEQFNKRLGDVSRHVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSNE
GRALMQLDFQQFLMKLEKLTDLRPIPDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQL
ANLVNVCLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagataaagtctcttatgacccgacagggcctcaaaagcccccaggagagcatg
gctgacctgagtccagtggagaatccgaggatccacagtacggaggagttgcgggagttg
aggcagcagcccatcgatccgcaggcggagcaggaaatcatcgacagcatcgaggaggtc
tacttctccagcgactccttcgacatggtgcagcacgaactggagaagcttccacctgag
ctgaacctgcaggagctggaggagcacagagacaaactgaagagacaacaggctgcggtt
tctaaaagggtcgctgatctaattttggagaagcagccttcttatgtcaaggaactggag
agggtgacggcattacagaccaatctccagctggcagcagtcatttgcaccaacgcaaga
agacaactcagagttgcaaaggaggagttcacagaggccagcctgggtctgttagccaat
cagaggaggcgacagctgctgacaggcctgcttaagtctctaaggaccatcaaaactctg
caaagaacagatgtaagactcagcgagatgcttgaggaggaagactatccaggtgcaatc
cagctctgtctagaatgtcaaaaggctgccagcaccttcaagcactacagctgcatcagt
gagctgaactctaaattacaagacactcttgagcaaatagaggagcagctcgatgtcgcc
ctgtcaaagacttgtaagcacttggatgtgttgcactacaccaaagtccagaaagcctac
acgctccttgggaaaacccagactgcgatggatcagctgcacatgcacttcacccaggcc
atccacaacacagtgttccaggttgtgctgggatacgtagaactgtgtgctggcaatgcg
gacaccaagtttcaaaagatgcagtataaggacctttgcacgcacatcaccctcgacagc
tacattccctgcctgacggatctctgtaaggctctgtgggaagtgatgctgagctaccac
cgtaccatgcagtggcatgaagagcatgacaagcagaaggccgcaccctcacaagatgac
tcagcagcagagccggatgagttgaatgtggaccgcagctacgtcaagaagaagctggag
cacggattgacgaggatctggcaggatgtccagctaaaggtgaaggtgtatatcttggga
acggacatgtctaacttcaaatacgatgatttcatagtggtgctggatgtcatcagcagg
ttgatgcaggttggtgaagagttctgtggcagtaagtcagaggtcctgcaggagtctatc
aaacgccagagtgtgaactacttcaaaaactatcacagggcacgattggaagagctcagg
atgtttctagaaaatgaaacgtgggaactgtgtccagtcaagtccaactttaacatttcc
cagctccacgagttcaagttcatgggccagtgccgctctccctccgtttccccaagcaga
caggctgcgtcctcggttcccccggccctggaggaactgtcccttttccagcaatatcat
caggatgggaatccctttgagatgcacattgaaaacaaggaagaggagacagaggatgtg
ctcgcttctaatgggtacgaatcggatgaactggagaagagcgtctatcaggactacgac
agtgacagcgatgtcccagatgagctcaagcaagactttgttgacgagcagacaggcgat
gttcccctgaagagcgtgtcccgtgagaccataagaagcaagaaaaagtcagattacaac
ctctgcaaggccagcgcgccaattctcaccaacaccaccctcaacgtcatccggcttgtc
ggaaaatacatgcagatgatgaatattctaaagccgattgccttcgatgtcatccactgt
gtatcacagctctttgactactacctttatgctgtatacaccttctttggacgtaacgac
atgcccatcccaagcccatctctgcccacctatagtggcagagaggcagtgccagccagg
gtggtgggccctgcctgcttgtatgagtcatcgggtttgggccttatcagcagtcgactg
agaaccactctgaaccggatccaggagagtctcattgacatggatcctgtcggggagaca
gtaggagtccatggtccaccagaggacaggaaggagaaggtccctattcctcacctgagc
cagatggttgttctcacggacagcggtactctgtatggactggcgcagagggtggtggcc
actgagtctcttgtgtttttggctgagcagtttgagtccctgcaatcccacttggacaca
atgatgcctgcagccaagaaaccgttccttcaacagttttattctcagaccgtgtccaca
gccagcgaactacgtaaaccaatatactggatagtggcagccaaggctatagactacgaa
caaatgctgctgatgatggccggagttaaatgggatatcaaggagataatgtcacagcac
aatgtatatgtggatgttctactgaaggagtttgagcaatttaacaagcggctgggtgat
gtttccagacatgtgcgtattcctttgcctgtgtccaacgttctctgggagcactgcatt
cgcttagcaaacaggactctggttgaaggctacgctaacgtgaagaagtgcagcaacgag
ggccgagccttgatgcagctggactttcagcagttcctgatgaagctggagaaactaacg
gacctgcgccccatccccgacaaggagtttgtggaaacctacatcaaggcctattacctg
actgagaacgatatggagcagtttatcaaaaatcacagggagtactccatgaagcagctg
gccaacctggtgaatgtgtgtctgggttcacatataaacaaaaaggctcgtcagaaactt
ctagctgccatcgatgacatcgaccgtcccaagagatag
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