Entry |
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Symbol |
pcdh1a
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Name |
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KO |
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Organism |
ctul Cyprinodon tularosa (White Sands pupfish)
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Pathway |
ctul03273 | Virion - Lassa virus and SFTS virus |
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Brite |
KEGG Orthology (KO) [BR:ctul00001]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
119786097 (pcdh1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:ctul01009]
119786097 (pcdh1a)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:ctul04515]
119786097 (pcdh1a)
Protein phosphatases and associated proteins [BR:ctul01009]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119786097 (pcdh1a)
Cell adhesion molecules [BR:ctul04515]
Cadherins
Protocadherins
119786097 (pcdh1a)
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
Unknown
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AA seq |
1190 aa
MELNLQAVLFWVVALHFGSADGSILYRVHEEQPPNTLIGSLAADQGLPDSGHLYKLEVGA
PYLRVDGKTGDIFTTEIPIDRETLRDCRSLAKGKPCYLEFEVSVTDLIQNQSPRLIEGRI
EVQDINDNTPQFPSSVLTISVPENTIMGALFSIPLATDRDSERNGVADYALTAGPDAATL
FGLQVADDRGGKLPQLIVLGNLDRELKDSYDLTIKAVDGGNPQRYSSALLRVVVTDANDN
LPKFEKSSYDAEVSENSPVGHSVLQVKANDSDMGPNGEIEYTIHQAVDPVPKLLRIDRST
GIIYVKGPLDREEISSLSFYVVARDKGPQPKSSKTFVTIEVTDQNDNAPAVEIRGIGLVT
HSEGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSPTDNKRKY
FLQTTTPLDFERVRDYRVEIVAVDSGNPALSSTNSLKVQVTDVNDNSPIFSPTLFEVDFA
EENQPGERILDVTATDADSGTNAQLLYNIVADSTIKALFEIDPNSGEVRARSPLDRENNE
RYEFRVTAADKGSPVHKGTATVVVKVLDRNDNEPKFMLSGYSFSVLENMPPLSPVGMVTV
QDMDKGENAQVHLSVEPDGGKFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPKS
SYVGVTINVLDENDNDPVITKPSNSSFRQLSPLASPDSHVEVVEAEDLDSGPNAELVFNI
AGGNPYQLFRISPTTGEITLAKEMTRKHGGLHRLVVRVSDRGKPSRHATALVHIYVNETI
SNVSLVESLVGHSLYTPLDRDIAGDPDSGFAAHRSNILFGSLAGVAGVVMLILVVVFIRH
RIQRETKSGYQAGKKETKDLYAPKQAPKNAKGKRGRKGKPPKSPKPLGENEEVGLQKGLK
FNLDGVNDSPRIHLPLTYSPGSPDIGRHYRSNSPLPSIQLQAQSPSASQKHQAVQDLPAA
NTFVGTGGDDNSTGSDQYSDYSYKTSQPKYSNKQHPHRRVTFSTTNPVQDLQDASQHSYY
DSGLEESETPSSKSSSGPRIGPLTLPEDHYERTTPDGSIGETEHPENDIRSLPDVAMTGN
CTTECSELGHSDACWMPGHPSPVRKTRNPPKLSTFVPYQERGSLGRLANGSARLSGEEHR
SRLPPSRSAYSSSGQDATQDCPVEEMPLSVASEFPPTSPSAHTPKREIYL |
NT seq |
3573 nt +upstreamnt +downstreamnt
atggaactgaatttacaagcagtactgttttgggtcgtggcgctgcactttggctctgcc
gacggcagtatcctctatcgagtccatgaggagcagccccccaacactctcataggcagc
ctggcagcagaccaggggctgccagattcaggtcacctctacaagttagaggtgggcgcc
ccttaccttcgagttgatgggaagacaggagacattttcactacagagattccaatagac
agagagaccctccgggactgccgttcccttgctaaaggcaagccatgctatttggaattt
gaagtgtcagtaaccgatctgatacagaaccagagcccacgacttattgaaggacgcatt
gaagtacaggacatcaatgacaacaccccgcaatttccctcttctgtgctcaccatctca
gtacctgagaacacaatcatgggggcattattctccatacctttagccactgacagggat
tctgagaggaatggagtggctgactatgcgctgactgcaggcccagatgcagcaacccta
tttggtttacaagtggctgatgacaggggagggaaactcccacagctcatcgtcctaggc
aatttggaccgtgagttaaaggattcttatgacctcaccatcaaggcagtggatggagga
aaccctcagcgctacagcagtgctctgctcagagtggttgtgaccgatgctaatgataac
ttgcccaagtttgaaaaatcctcatatgatgcagaagtttcagaaaacagtccggtgggg
cactctgtgttacaggtcaaagcaaatgactctgacatgggccctaatggagaaattgaa
tacaccattcaccaagcagtcgacccagtgccaaaactcttacgaattgatcgatctact
ggcattatctatgtcaaaggacctctggacagagaggaaatcagcagcttgtctttctat
gtggtggcaagagataaaggtcctcaacctaagagctctaagacgtttgtaactattgag
gtgactgatcaaaatgacaatgctcccgcagtggaaattcgtggaattggtcttgtgact
cacagtgaaggagtggccaatatttcagaggacatgccagtggggacagctgttgctttg
gtccaggtttctgacaaagacgaaggagagaatgctgtagttacttgcgtggttgcagga
gatgttccctttcaacttcgccctgccagtgactctcccactgacaacaaaagaaaatac
tttcttcagacaactacaccacttgactttgagagagtcagggactacagagtagaaatt
gttgcggtggattcgggaaacccagcactatccagtacaaactccctaaaagtgcaggtg
accgatgtgaatgacaactcaccaatattctccccaacattgtttgaggtagactttgct
gaagaaaaccaaccaggtgagaggattttagatgtcactgctacagatgctgacagtggc
acaaatgcccaactcttgtataacattgtggcggactcaaccattaaagctttgtttgag
atcgaccccaactcaggggaagtaagagctcgaagcccactggatcgtgaaaataatgag
cggtatgagtttcgagtcacagcggcagataaaggatcgcctgttcacaagggaacagca
acagttgtggtaaaagttcttgatcgcaatgacaatgagccaaagttcatgcttagtggc
tacagcttttcagtattggaaaacatgcctcccctgagtcctgtcggtatggtgacagtt
caagatatggacaaaggtgagaatgctcaagttcacctctctgtagaacctgatgggggg
aagtttgttgttcagaatggaacaggtactattctttcaagcatctcatttgacagagaa
aaagaaagtagctatacttttcgtttaaaggctgtggatgggggagaaccgcccaagtct
tcttatgttggtgtcaccattaatgtactggatgaaaatgacaatgaccctgttattaca
aagccctccaattcttccttcaggcagttatcacctctagcatccccagacagccatgtt
gaagtggtggaggctgaagacctggacagtgggccgaatgcagagctagtcttcaatatt
gctggaggaaatccttaccaattattccgcatctctcccacaactggagagattactcta
gcaaaggagatgacccgcaaacatgggggactgcatcgtctagtagtgcgtgtaagtgac
aggggaaagccttcacgccatgctactgccctggttcacatctatgtcaatgaaacaatt
tcaaatgtcagcttagtggaatccctggttggacacagtctttatactccactagacagg
gacattgctggtgatcctgacagtggttttgctgcacatcgcagtaacattttgtttggc
agccttgccggtgtggcaggagttgtgatgttgatcttggttgtagtctttatccgccac
cgcattcagagagaaacaaagagtggctatcaggcaggtaaaaaagaaacaaaggatctg
tatgcccccaagcaggcaccaaagaatgccaaaggtaaacgaggcagaaaaggcaagccc
ccaaagtccccaaagccccttggagaaaatgaagaggtcggccttcaaaagggtctgaag
ttcaaccttgatggagtcaatgatagcccccggatacacctgcccttaacatattcacca
ggaagcccagatatcggcagacattaccgctccaactctcccttaccttcaattcaactg
caagcccaatctccctcagcttctcagaagcaccaggctgtgcaggacctcccagcagcc
aacacttttgtcggaactggaggagatgacaactctaccggctcagaccagtactcagat
tacagctacaagaccagccaacccaagtatagcaacaaacagcatccccatcgtcgtgtg
accttttctaccaccaacccagtgcaggacctgcaggacgcctcacagcacagctactat
gacagtggcttggaagagtcggagacccccagcagtaagtcttcatctggtcctcgcatc
ggacccctgaccctgcccgaggaccactacgagaggaccaccccagatggcagtattgga
gaaacagaacacccagaaaacgatatccgctctctccctgatgtggcgatgaccggaaac
tgcacaactgagtgcagtgaattgggtcactcagatgcctgctggatgccaggccatccc
tcccctgtgcgtaagaccaggaatccccccaagctctccacattcgtgccttaccaggag
agagggagtctgggacgcctggccaacggcagcgccaggctgagtggtgaggagcaccgg
tcgcgccttccaccctctcgcagtgcctattccagcagcggccaagatgccactcaggac
tgccctgtagaggagatgcccctgagtgttgcctctgagttcccacccacatccccatcg
gcccacacccctaaacgagagatttacctgtga |