KEGG   Cyprinodon tularosa (White Sands pupfish): 119786097
Entry
119786097         CDS       T07496                                 
Symbol
pcdh1a
Name
(RefSeq) protocadherin-1
  KO
K16498  protocadherin delta 1
Organism
ctul  Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:ctul00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    119786097 (pcdh1a)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ctul01009]
    119786097 (pcdh1a)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ctul04515]
    119786097 (pcdh1a)
Protein phosphatases and associated proteins [BR:ctul01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     119786097 (pcdh1a)
Cell adhesion molecules [BR:ctul04515]
 Cadherins
  Protocadherins
   119786097 (pcdh1a)
SSDB
Motif
Pfam: Cadherin Protocadherin Cadherin_2 Cadherin_CELSR2_9th Syndecan
Other DBs
NCBI-GeneID: 119786097
NCBI-ProteinID: XP_038145117
LinkDB
Position
Unknown
AA seq 1190 aa
MELNLQAVLFWVVALHFGSADGSILYRVHEEQPPNTLIGSLAADQGLPDSGHLYKLEVGA
PYLRVDGKTGDIFTTEIPIDRETLRDCRSLAKGKPCYLEFEVSVTDLIQNQSPRLIEGRI
EVQDINDNTPQFPSSVLTISVPENTIMGALFSIPLATDRDSERNGVADYALTAGPDAATL
FGLQVADDRGGKLPQLIVLGNLDRELKDSYDLTIKAVDGGNPQRYSSALLRVVVTDANDN
LPKFEKSSYDAEVSENSPVGHSVLQVKANDSDMGPNGEIEYTIHQAVDPVPKLLRIDRST
GIIYVKGPLDREEISSLSFYVVARDKGPQPKSSKTFVTIEVTDQNDNAPAVEIRGIGLVT
HSEGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSPTDNKRKY
FLQTTTPLDFERVRDYRVEIVAVDSGNPALSSTNSLKVQVTDVNDNSPIFSPTLFEVDFA
EENQPGERILDVTATDADSGTNAQLLYNIVADSTIKALFEIDPNSGEVRARSPLDRENNE
RYEFRVTAADKGSPVHKGTATVVVKVLDRNDNEPKFMLSGYSFSVLENMPPLSPVGMVTV
QDMDKGENAQVHLSVEPDGGKFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPKS
SYVGVTINVLDENDNDPVITKPSNSSFRQLSPLASPDSHVEVVEAEDLDSGPNAELVFNI
AGGNPYQLFRISPTTGEITLAKEMTRKHGGLHRLVVRVSDRGKPSRHATALVHIYVNETI
SNVSLVESLVGHSLYTPLDRDIAGDPDSGFAAHRSNILFGSLAGVAGVVMLILVVVFIRH
RIQRETKSGYQAGKKETKDLYAPKQAPKNAKGKRGRKGKPPKSPKPLGENEEVGLQKGLK
FNLDGVNDSPRIHLPLTYSPGSPDIGRHYRSNSPLPSIQLQAQSPSASQKHQAVQDLPAA
NTFVGTGGDDNSTGSDQYSDYSYKTSQPKYSNKQHPHRRVTFSTTNPVQDLQDASQHSYY
DSGLEESETPSSKSSSGPRIGPLTLPEDHYERTTPDGSIGETEHPENDIRSLPDVAMTGN
CTTECSELGHSDACWMPGHPSPVRKTRNPPKLSTFVPYQERGSLGRLANGSARLSGEEHR
SRLPPSRSAYSSSGQDATQDCPVEEMPLSVASEFPPTSPSAHTPKREIYL
NT seq 3573 nt   +upstreamnt  +downstreamnt
atggaactgaatttacaagcagtactgttttgggtcgtggcgctgcactttggctctgcc
gacggcagtatcctctatcgagtccatgaggagcagccccccaacactctcataggcagc
ctggcagcagaccaggggctgccagattcaggtcacctctacaagttagaggtgggcgcc
ccttaccttcgagttgatgggaagacaggagacattttcactacagagattccaatagac
agagagaccctccgggactgccgttcccttgctaaaggcaagccatgctatttggaattt
gaagtgtcagtaaccgatctgatacagaaccagagcccacgacttattgaaggacgcatt
gaagtacaggacatcaatgacaacaccccgcaatttccctcttctgtgctcaccatctca
gtacctgagaacacaatcatgggggcattattctccatacctttagccactgacagggat
tctgagaggaatggagtggctgactatgcgctgactgcaggcccagatgcagcaacccta
tttggtttacaagtggctgatgacaggggagggaaactcccacagctcatcgtcctaggc
aatttggaccgtgagttaaaggattcttatgacctcaccatcaaggcagtggatggagga
aaccctcagcgctacagcagtgctctgctcagagtggttgtgaccgatgctaatgataac
ttgcccaagtttgaaaaatcctcatatgatgcagaagtttcagaaaacagtccggtgggg
cactctgtgttacaggtcaaagcaaatgactctgacatgggccctaatggagaaattgaa
tacaccattcaccaagcagtcgacccagtgccaaaactcttacgaattgatcgatctact
ggcattatctatgtcaaaggacctctggacagagaggaaatcagcagcttgtctttctat
gtggtggcaagagataaaggtcctcaacctaagagctctaagacgtttgtaactattgag
gtgactgatcaaaatgacaatgctcccgcagtggaaattcgtggaattggtcttgtgact
cacagtgaaggagtggccaatatttcagaggacatgccagtggggacagctgttgctttg
gtccaggtttctgacaaagacgaaggagagaatgctgtagttacttgcgtggttgcagga
gatgttccctttcaacttcgccctgccagtgactctcccactgacaacaaaagaaaatac
tttcttcagacaactacaccacttgactttgagagagtcagggactacagagtagaaatt
gttgcggtggattcgggaaacccagcactatccagtacaaactccctaaaagtgcaggtg
accgatgtgaatgacaactcaccaatattctccccaacattgtttgaggtagactttgct
gaagaaaaccaaccaggtgagaggattttagatgtcactgctacagatgctgacagtggc
acaaatgcccaactcttgtataacattgtggcggactcaaccattaaagctttgtttgag
atcgaccccaactcaggggaagtaagagctcgaagcccactggatcgtgaaaataatgag
cggtatgagtttcgagtcacagcggcagataaaggatcgcctgttcacaagggaacagca
acagttgtggtaaaagttcttgatcgcaatgacaatgagccaaagttcatgcttagtggc
tacagcttttcagtattggaaaacatgcctcccctgagtcctgtcggtatggtgacagtt
caagatatggacaaaggtgagaatgctcaagttcacctctctgtagaacctgatgggggg
aagtttgttgttcagaatggaacaggtactattctttcaagcatctcatttgacagagaa
aaagaaagtagctatacttttcgtttaaaggctgtggatgggggagaaccgcccaagtct
tcttatgttggtgtcaccattaatgtactggatgaaaatgacaatgaccctgttattaca
aagccctccaattcttccttcaggcagttatcacctctagcatccccagacagccatgtt
gaagtggtggaggctgaagacctggacagtgggccgaatgcagagctagtcttcaatatt
gctggaggaaatccttaccaattattccgcatctctcccacaactggagagattactcta
gcaaaggagatgacccgcaaacatgggggactgcatcgtctagtagtgcgtgtaagtgac
aggggaaagccttcacgccatgctactgccctggttcacatctatgtcaatgaaacaatt
tcaaatgtcagcttagtggaatccctggttggacacagtctttatactccactagacagg
gacattgctggtgatcctgacagtggttttgctgcacatcgcagtaacattttgtttggc
agccttgccggtgtggcaggagttgtgatgttgatcttggttgtagtctttatccgccac
cgcattcagagagaaacaaagagtggctatcaggcaggtaaaaaagaaacaaaggatctg
tatgcccccaagcaggcaccaaagaatgccaaaggtaaacgaggcagaaaaggcaagccc
ccaaagtccccaaagccccttggagaaaatgaagaggtcggccttcaaaagggtctgaag
ttcaaccttgatggagtcaatgatagcccccggatacacctgcccttaacatattcacca
ggaagcccagatatcggcagacattaccgctccaactctcccttaccttcaattcaactg
caagcccaatctccctcagcttctcagaagcaccaggctgtgcaggacctcccagcagcc
aacacttttgtcggaactggaggagatgacaactctaccggctcagaccagtactcagat
tacagctacaagaccagccaacccaagtatagcaacaaacagcatccccatcgtcgtgtg
accttttctaccaccaacccagtgcaggacctgcaggacgcctcacagcacagctactat
gacagtggcttggaagagtcggagacccccagcagtaagtcttcatctggtcctcgcatc
ggacccctgaccctgcccgaggaccactacgagaggaccaccccagatggcagtattgga
gaaacagaacacccagaaaacgatatccgctctctccctgatgtggcgatgaccggaaac
tgcacaactgagtgcagtgaattgggtcactcagatgcctgctggatgccaggccatccc
tcccctgtgcgtaagaccaggaatccccccaagctctccacattcgtgccttaccaggag
agagggagtctgggacgcctggccaacggcagcgccaggctgagtggtgaggagcaccgg
tcgcgccttccaccctctcgcagtgcctattccagcagcggccaagatgccactcaggac
tgccctgtagaggagatgcccctgagtgttgcctctgagttcccacccacatccccatcg
gcccacacccctaaacgagagatttacctgtga

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