Cyprinodon tularosa (White Sands pupfish): 119786210
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Entry
119786210 CDS
T07496
Symbol
smo
Name
(RefSeq) smoothened homolog
KO
K06226
smoothened
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
119786210 (smo)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ctul04030
]
119786210 (smo)
G protein-coupled receptors [BR:
ctul04030
]
Frizzled / Smoothened family
119786210 (smo)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Frizzled
Fz
Motif
Other DBs
NCBI-GeneID:
119786210
NCBI-ProteinID:
XP_038145319
LinkDB
All DBs
Position
Unknown
AA seq
809 aa
AA seq
DB search
MSSQAWSPIVGMLCIWAAWLWGCRAVLAQNGTLFEDNCKKTTTCEALKYNTCLGSPLPYT
HTSLILAEDSSSQEEAFEKLTMWSGLRNAPRCWSVIQPLLCAIYMPKCDNGQVELPSKSL
CLATRRPCSIVDRERGWPNFLKCDKFPVGCSVPKLKFNTSGQCEAPLVKTNIQSSWYKDV
EGCGIQCDNPLFTEEEHDDMHAYIAYFGTVTLLCTFFTLATFLADWKNSNRYPAVILFYI
NACFFVGSIGWLAQFLDGARKEIVCKSDNTMRLGEPSSSETLSCVTIFIIVYYSLMSGVI
WFVMLTYAWHTSFKALGTTQQPLSGRTSYFHMVTWSIPFVLTVAILALAEVDGDSVSGIC
FVGYKNYHYRAGFVLAPIGVVLVVGGYFLIRGVMTLFSIKSNHPGLLSEKAASKINETML
RLGIFGFLAFGFVFITFGCHFYDFFNQAEWERSFREYVLCEANVTIASQTNKPIPECTIK
NRPSLMVEKINLFSMFGTGIAMSTWVWTKATFLIWKRTWFKIIGRSDNEPKRIKKSKMIA
KAFAMRKELHKDPEKELSFSMHTMSHDGPVAGINFELNEPSNDVSSAWALHVTKMVARRG
AILPQDISVTPTGTPVPPPEAKNKLWMVEAEISPEMIKRKKKKKKRRKEVRKPEEVVENQ
TCLQREFGRSAVPRLPKLPCHPSLVANLREQQRELTLEQENLPGSLPDFEPYEERCPYLQ
CQSSKNSYLMTQVDCPENLGLRPRCTPLTSNRQPGGSSMFPGGMDHPGGLSERMAHVARV
PAGRRAGYGPIHSRTNLMEAELMDADSDF
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccaggcttggagccccattgttgggatgctttgcatctgggctgcctggctg
tggggctgtagggcagtgctggcccagaacgggacgttgtttgaagacaactgcaagaaa
actacaacttgtgaggcgcttaaatacaacacttgcttgggatcacctttaccgtacacc
catacatctctgatcctggctgaggactccagtagccaagaggaggcttttgaaaagctg
accatgtggtctggattgcgaaatgctccacgctgttggtctgtaatccagccactgctc
tgtgccatctacatgccaaaatgtgacaatgggcaagtggagctgcccagcaaaagtctg
tgtttggccacacgtcgcccttgcagcatcgtggatcgagagagaggatggcccaatttt
ctcaaatgtgacaaattcccagtgggctgttcggtgccgaagttgaagttcaacacctca
ggccagtgtgaagctcctctggtgaagacaaacattcagtccagttggtacaaggatgta
gaaggttgtggtatccagtgtgacaaccccttgttcacagaagaggagcacgatgatatg
cacgcctacattgcttactttggcacagtcaccctcctctgcaccttttttactttggcc
acatttcttgctgactggaaaaattcaaaccgctacccagccgtcattctcttctacatc
aatgcttgcttctttgtgggcagcattggttggctggcccaatttctggatggagcacgc
aaggagattgtgtgcaagagcgacaacactatgcggctaggggagccctcatcttcagaa
acgctgtcatgtgtcaccatcttcatcatcgtctattactccctgatgtctggtgtgatc
tggttcgtcatgctcacctacgcctggcacacctccttcaaggctttgggaacaactcaa
cagccgctatctggacgaacctcttatttccacatggtgacctggtccatcccttttgtc
ctcactgttgccatccttgctttagctgaggtggatggggactctgtgagcgggatttgc
tttgttggctacaagaactaccactatcgggctggatttgtgctggcgcccattggagtg
gtgctagttgttggaggctacttcctcatccggggtgtcatgaccttattttccatcaag
agtaaccacccgggactgctgagtgagaaagcagccagcaaaatcaatgagacaatgctg
agacttggtatatttggattccttgcctttggctttgttttcatcacattcggatgtcac
ttttatgacttcttcaaccaggctgaatgggagagaagcttcagagaatatgtgctgtgt
gaagccaatgtgacaattgcttctcaaaccaataagcccatcccagaatgcaccattaaa
aaccgtcccagtctgatggtggagaagatcaatctgttttccatgttcgggacaggaata
gctatgagcacctgggtctggactaaggccacctttctcatctggaaacgcacttggttc
aagatcatcggtcgcagtgacaatgaacccaaaaggatcaagaagagcaaaatgattgct
aaggcgtttgcaatgagaaaggagcttcacaaggacccggagaaggagctttccttcagc
atgcacaccatgtcacacgatggcccagtggctggaattaattttgagctgaacgagcca
tccaatgatgtttcatcagcatgggcgttacacgtgaccaagatggtcgctagacgtgga
gccatactgcctcaggacatttctgtcactcccactgggacaccagtgccccctccagag
gcgaagaacaagttgtggatggtggaggcagagatatcacctgagatgataaagaggaaa
aagaagaagaagaaaagaaggaaggaggtgcgaaagccggaagaggtggtggaaaaccaa
acttgccttcagcgagagtttggccgcagcgcagttccccgactgcctaaacttccctgt
cacccaagcctggtggccaatctgcgtgaacagcagagggagctgacgttggagcaggag
aatctgccaggctctttaccagattttgaaccttatgaggagaggtgtccttacctgcag
tgtcagagcagtaaaaatagttatctgatgactcaggttgattgtccggaaaacctgggt
cttaggccacgctgtacccctttgacttcaaaccggcagcctggtggatcatcaatgttc
ccaggagggatggatcatcctggcgggctgtcagagagaatggctcatgtggcacgggta
ccagcgggccgcagggctggctatggacccatccactccaggaccaatttaatggaagca
gagcttatggatgctgactctgatttttaa
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